Array 1 5274-5110 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MIOP01000035.1 Corynebacterium diphtheriae strain ST402-SA-1980-2337 2337_contig_40, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
      5273	    36	 100.0	    28	....................................	TCAAGATCACCTCACTGCTGACACACGC	
      5209	    36	 100.0	    28	....................................	TTGGTTTTTAGGAAAAAGACCAGCCCAC	
      5145	    36	 100.0	     0	....................................	|                           	
==========	======	======	======	====================================	============================	==================
         3	    36	 100.0	    28	GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC	                            	       

# Left flank :   AAAAACCCTGATAGACTTCTACTCGCGCTCGCTAAATTCACCTGTC
# Right flank :  AGGTAGCCCAAAAAACCATGTTAAACAGGATTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAAG

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.35%AT]
# 	Reference repeat match prediction:         R [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.50,-4.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-41.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [1.05,4.5   Confidence: MEDIUM] 

# Array family : II-C [Matched known repeat from this family],   
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