Array 1 238-3538 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRV01000129.1 Thiohalocapsa halophila strain DSM 6210 scaffold0128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 238 36 100.0 36 .................................... TTGCTGTGCGGGGCAATGCCGCTGCCGTTGCTGGTG 310 36 100.0 36 .................................... GCTTCAAATTCGCCGATCTGATCCAGGCGATCCACC 382 36 100.0 37 .................................... GTAGCGGAGGGCGAAAAGCGGCTGACGCAGGAAATGG 455 36 100.0 35 .................................... GTTAAAAAAGAACGTAGAAGCGACTAGCCCAACTG 526 36 100.0 36 .................................... CTCCTTGGCAATCAGCTGCCCCAGTCGCGCGCCCAA 598 36 100.0 36 .................................... TTGCTCTGGACCGGGTGCCGCAACAGCGAGGCCATC 670 36 100.0 38 .................................... ATGATTTAGGCTCCTTTTGTGGTTGGGCGGCTTGGTCG 744 36 100.0 36 .................................... TTCTTATGTTCTATAAGCCCGACTATCTTCCGGTAA 816 36 100.0 39 .................................... AGGATCGCGAGCACGGGCGCCGACAGCGGGACCACGTGT 891 36 100.0 37 .................................... GCTAGCTGCCGGCACCGCATCTGCGCAGTAGGGGCTG 964 36 100.0 36 .................................... TCCAGGTACACTCTAGTGATATGCGTGCGGTCAAAA 1036 36 100.0 35 .................................... GACGGATGCCCCGGGCGACTACCGGATGCGCTTTG 1107 36 100.0 37 .................................... ATGTGGACCTGGGGCCGCCAGGACGGGCGCATCAGCC 1180 36 100.0 38 .................................... CGGTGCCGACGGAGCGCCCCGGCGACCAGGCGGGGACC 1254 36 100.0 37 .................................... TAGAAGTCCTCCTCGCGCAGCATCTGCTGCCGCCCGC 1327 36 100.0 36 .................................... AGGGCGGTGCGCGCGGCGCCGCCGGATTGCGCCAGT 1399 36 100.0 35 .................................... AGCCTGGACCTAGACGCAGAGTATTACGAGGGACT 1470 36 100.0 37 .................................... ATAAGCGATAACCGCGCCATGTCACTAATCCTGCACC 1543 36 100.0 37 .................................... AGAGCATGATCACGGAGGATACTTGGCAGATCAACGA 1616 36 100.0 35 .................................... GAGCTCTTCAGCCCGCGCGAACCCGCCGACAACGA 1687 36 100.0 36 .................................... GTGACGCTGTGACGGCGGCCGTGCTAGACACCCTGG 1759 36 100.0 37 .................................... CATACTCAAGCGTCTCGGCAGAGACTAGCCAGCCCAT 1832 36 100.0 35 .................................... ATATACAACAGGGCCAAGGTGTCTTCTGACAACCC 1903 36 100.0 37 .................................... GTCAAATCCTAAATCCTAAATCTGTGCCGTTTCGCAA 1976 36 100.0 35 .................................... CCATCACCCTGCACCTGCGAGGCTGAGCTGTGCCC 2047 36 100.0 35 .................................... CGCCCGGTCGGCGTATTCTTGCGTACGCGGCCCCC 2118 36 100.0 37 .................................... GCAGTGCTGCGGGGTCTGTTGCTAGGGGTGCGCTCGC 2191 36 100.0 35 .................................... AGACTTCAAAACATTGGCAATCTTTTGTGCTAGAT 2262 36 100.0 39 .................................... TTTGAGGGCCGCGCGTACCGGGATTGGCGCAAGGCGCAG 2337 36 100.0 37 .................................... GTCGAATCGGGTTGCGGTCATGCTCATGCTGCGTCTC 2410 36 100.0 38 .................................... CCGTCCACACTCACCGTGCCGTCCGGCGCTACCGTGGC 2484 36 100.0 36 .................................... GCGCCGCCGCAGCGCAAGGTGCAGTGGGCCAAGCTG 2556 36 100.0 36 .................................... GGACATCAAAGCGGAACATGACGAGTTCGACGCGCT 2628 36 100.0 36 .................................... AGCGCATCCCATGTCAGTGGCGCGGCGCAGCTCATC 2700 36 100.0 38 .................................... AGGTTGCTGGCGCTGCCGGCGCTGGCCAGTTGCAGTAG 2774 36 100.0 36 .................................... TTGGCCGCCAACCCGGCCCGCGAGAGCGACATCCGC 2846 36 100.0 37 .................................... TGTTGCCGGGGTTGTGTTGCCGGGTTGGAGGGTTGTG 2919 36 100.0 37 .................................... GAGCAAAGGTGCCCTGTGGGGTAGCACCGGGTAACGT 2992 36 100.0 35 .................................... GGTCACAGCCGCTCTAGCGACTGCTGCATGTGCTG 3063 36 100.0 38 .................................... TAGACACACCTGATCCCACAGCACAATACCCAGATGCC 3137 36 97.2 37 .........C.......................... TGCACGACGTTGATGCGCGATTCGAGCGAGTCATGCA 3210 36 100.0 36 .................................... CACCGAATGGCGTCGGTGAGGAATTCCTCGGTGTCA 3282 36 100.0 36 .................................... CACCGAATGGCGTCGGTGAGGAATTCCTCGGTGTCA 3354 36 100.0 38 .................................... CGACAGCTCGTGCTCGCTCCACTGCGGTGCAGCGTGCG 3428 36 100.0 39 .................................... ACGCGCTCACGGTCGAGCTTCAGCTCGTTGATGCGGGCC 3503 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 46 36 99.9 37 ATCTCCCCGGCCAATTGGCCGGGGCCTCATTGAAGC # Left flank : CCGCGTCGCCCATCGCGTAACGCTGGTTGTTGCCGCCCTTGCGCGCGTCCGGCAGCTCGTCCAGCGCTCGGCGGATCCTCGTCACCACCGTTGCCGCCGTGAACCGCTGCGTAGTGGGCTCGGGCTTGGACTCCGGCTTGGGCTCGGGCTTGGGCCTCAGGACCATCGGACTCTCCAGTAACTTGTGAAGAGTCCTTCATAACATCATGCTTTTAAATTTGGAACTGCTGATTCGCCA # Right flank : CTACAACCGGCGCCGGCCTGACTCCCACACTGAGAGCAATCTCCCCGGCCAATTGGCCTCATTGAAGCCCGAGCGTGCTTTATCGCATCGTGTGTCGTGCTGGGCCTTGATCATAACTCCGACCACTTCCAGCGCCGATCTCCGGCGCTTCAGACTAAGTGTCTGATTTGATGGGCTTAGCAGCAGCATAACCATCCGCGACGCTGGATTCTGGACGGACTTATGATCAAGGCCTCGTGCTGATCAAGCGGCCTGGGATAGCACCTTGTTCAGCTCATGCCAGAAGATCGCGGTCTGCTCAGGCTTCTGATCAAAAAAGTCCTCGAAAAACCCAGGCGCATTTAAGGCGGCGGGATAGGCATACCGCTCACCGTCATCGCCGAGCTCGGTGAGCCAATCAGCTGGTTGTTGACTGTCGATCACCTCGAACAAGGCGGCTGGATACAGATAGGGCTTGCCGGAATCATTGAGTATCCGAAGATCGTCGGCCTCAATGCCAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCCCGGCCAATTGGCCGGGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.30,-15.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 48640-47956 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRV01000040.1 Thiohalocapsa halophila strain DSM 6210 scaffold0039, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 48639 36 100.0 36 .................................... TCCTGGTATTAATGTCTGCTTCAACTATATCCTGGA 48567 36 100.0 35 .................................... GTTCCGTTTGTGACCATTTGCTCTGCGAGAGACGC 48496 36 100.0 36 .................................... GCGACGGCGCTTCGGGACCGGCTGCGCAGCGAGCTG 48424 36 100.0 35 .................................... CCGTCATGCTCGTTGACGGCGAGCTGGCGCTTAAT 48353 36 100.0 37 .................................... GTCTCGCGCCGCCGGGCGCGCATCGAGCGCAAACGCG 48280 36 100.0 36 .................................... CCGTTCACGCACGAGTATGAAAGCCTCAATGATGGG 48208 36 100.0 36 .................................... TGCGCACTGCGCACTGCGCACTTCCCCCAGTCATAT 48136 36 100.0 37 .................................... GGACGCGCAGGTTGGGGCGGGCGGGGGCGTCGGCGAC 48063 36 100.0 36 .................................... CCCACCTCAACGAATCAACCAGCGCTGATGACCCGC 47991 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 10 36 100.0 36 GCTTCAATGAGGCCCCGGCCAATTGGCCGGGGAGAT # Left flank : TGACGCTGTACTGGCCGTTCGACTCCTGGGAGCAGCTCCTCGACTTCATGCACGAGGCCCTGGAGCCCGCGACGCCGCCGCCTACTGGCCGCGCCGCTGCGCCAGGGCGGCAAATTTAGAATTGCTGATGGCGAATATGGAGACTTGAAGCCTGAGCACGTAGC # Right flank : GGCTTGGCTGTCCTTGCAGCAACCGCGCGCATTTTGCCATGGTTTGCGAGCGGTCGGGCCGACGGCGTGCATCGACCCCCGTCACCATGAGTGACCCTCTAAAGAGGCTATCACAACATCCAGATTTTTAAAGAGCGAGTCGTCGCGAGCGCTGCGCAGGGTTCTGTTGCCACTCTAGCGCTCGCGATGGAGCGGCGGGGGTCTGTGCGGACGGCGCCTCCGGCGCCGTAGGGTCCGCAGTTACCCGGTGACCCTACACGATGATGGGCGCTTGCTCGACGGGTGTGAAGTCGGCTTTCCCGAGGCTGATGACGTTCGGGCTGACATGGTCGGCGTTGCCGAAGTCCAGGAGCAGGACGTGGTCTTCGCTGTGGTGGATGATGCCGTCGATCAGGCTGACCAGCTCGGCGTGCTGCTGGCGGGTGAGGCGGCACTGGAACACGGAGAGCTGGACCCATTCGCCATAGCCCTTCATGAGCGTGAAGATGCGCCGCCAGCGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATGAGGCCCCGGCCAATTGGCCGGGGAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.30,-15.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 49116-49988 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRV01000062.1 Thiohalocapsa halophila strain DSM 6210 scaffold0061, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 49116 36 100.0 33 .................................... TGCTACGTTTTTTGCATCAAACATCTGTTTGAC 49185 36 94.4 34 AG.................................. GCACGTATAGAAACCGGGAGATGGGTTAGTGGTT 49255 36 100.0 34 .................................... GAGTGCCACATGGACAGATATACGCCGTCGCCCC 49325 36 100.0 34 .................................... GTCTCCCTCGACCTCACCGGCGATTGAGAGTCAT 49395 36 97.2 35 ...............................G.... CCTCACCAAAGGACTGGACGAACACGTCGTCCAGG 49466 36 97.2 33 ........T........................... TGAGCAATTTGACTATCGAACGCCGCCAATTGC 49535 36 100.0 34 .................................... TTGACCGTGAAGGTCATCGTAGCAGTTGTCAGTT 49605 36 100.0 33 .................................... CATCTGGAATCGGCTTGCCATACAAGCGAATGC 49674 36 100.0 33 .................................... TCACGACTGCGACCGAGGCGAGCATGCCGGGGA 49743 36 100.0 34 .................................... GCTCGTCTTGACGGTACAAAGCCGGGGCATTCAA 49813 36 80.6 34 AC.......CA........GC......C........ GAGTCAGCTCGGCTTGATGGCACAAAGCCGGGCT 49883 35 77.8 34 ...T......-....T..CGC..........GA... GCCATTTTCGGTGGCCAAAGAAGCTTCCGGCATC A [49896] 49953 36 77.8 0 .A.........A.T....C..AC...C........A | ========== ====== ====== ====== ==================================== =================================== ================== 13 36 94.2 34 GTCCGAATGACGCCCCGCTAATGAGGGGGTTACGAC # Left flank : GGACATTCCTCGAGGACTTCGAGCCCCTTTATCCGCCGGACAGCAAACTCAAGGTGCTGCTTCATGACGATCAGGCCGAGGCGCTTAGCCGGGACCATAAAAGGTCAGACAGCGACACAGTCCGCAAGGTAGAGTTTGAGCCCGAACTGTTGCCCTGGGAGCGTGAGCTGCGCAAGAGTGGCTCCGGAGTCGGCAGGGGCGGCAACGGACAAAGCAAGCGCCGGACAACCACAAATCGACGCCGTACACCTGGCCCCAAAGGTCGAGACAAGCGGTGACACGCGGCAAGCGCGCACCAAGGCGTTGCCCGGCACCGACCGTACCTCGTCGGCATGGCCTCACCTCTTGCCTGCGCACTGTTGATACGTACAGCGCCTGCGCACTGTTGATACGTACAGCAAAAGTGGACTACCTGCAAACTAAGTCTGTGCTACGAAAACGGTGTCACAAATGAGACACTCCAAGCCATTGATCGGAATGAATAATCCCGACGCGCCAGG # Right flank : AGGGAGTGTGCAGTACTTCGGATAGACCGGATGAAACACCCCTCTGGTGAAGGAGATCGTCGGAGACCTAGGGTGAGACCTAAGGGGAGCTGAAAAGGGAGCGGCGGAATGCCGAACGGCGCCGGAGACGGCGCCGGTGCACTTGTTGTGATGCTCGCGCTTCCTAGTGGGCGTGGTAATGGCGGGGGTGAGCGGAAAGCGATGGGGGCTTTGAGTGGCAGGGCCTGGCCATTGGGCCGTCGGCCTGGGGGGATGCGCGGGTACGCCTCCGCGCCGGTATTGCGGCGTGGCGGGCGCACATGATGGCGCGTTGTTCTAACGAGGAGTTTGGGATTTAGGGCGGTGTAGGCGCGCTGTCGACCGCCATAGCCATTTTTCTGTCCGGATGCATGCTGTCCTTCTGGCCTTGCCATAGCTGTTTGCGGCCATACGGGTGCGATCCGGTGGGGCGGCGCAGGCGAGGCCGACTGGAGGGCGAGACGGTCGAGCAGGATCACCGC # Questionable array : NO Score: 2.93 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAATGACGCCCCGCTAATGAGGGGGTTACGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 62983-60819 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRRV01000062.1 Thiohalocapsa halophila strain DSM 6210 scaffold0061, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 62982 29 96.6 32 A............................ GTGGCATCCCCTTGCAGGTGCGCCAGCATCTG 62921 29 100.0 32 ............................. AGAGCTGAGGCGTCGGGCCGCAAGGTCCAGTA 62860 29 100.0 32 ............................. TCACCTCGACCAAAAGCCAGAACGCCAAGAAA 62799 29 100.0 32 ............................. TGCTTGATCGAGCGTGGCAAGGCTGACCCGAA 62738 29 100.0 32 ............................. GCGGCTTGCAGGGCGGCGTAAAGGCGGTCTAC 62677 29 100.0 32 ............................. TCCGGGCTGCGGTTCGTATACCGGGCCGAGCA 62616 29 100.0 32 ............................. TCGCAACAGCATGAGCCGCACGCGGCTGAGGG 62555 29 100.0 32 ............................. ACGTCGAAAAAGACTGGGGTTCAGTACGTGAA 62494 29 100.0 32 ............................. ACCCCAATCGGACCGCTCACCATCCGCGCCAG 62433 29 100.0 32 ............................. TCGGGAAGCGTGCGCAGCTTGGTACGAATCAG 62372 29 100.0 32 ............................. AACGACAGCTGGCGCATTCCGGTGACCGACGA 62311 29 100.0 32 ............................. GTCAAGATGACCTTCGGGCCGAGCACCAGCAC 62250 29 100.0 32 ............................. TCCGGCGCAGTGCTCTCGCCCTGGGGCACGCG 62189 29 100.0 32 ............................. CTGGAGAACCTCGTGGGCCGGATGCAGGGCGA 62128 29 100.0 32 ............................. TTGATGTCCGCAAGCACGTCCACCTTGGCCAA 62067 29 100.0 32 ............................. AGGCGGCCGGTGGCGATGATCTGCCCGGCGAT 62006 29 100.0 32 ............................. TTGTACCAGCGCATGTCGTCGGGCTGATAGTG 61945 29 100.0 32 ............................. GGACGCCGGCGGTGCGTCATGCGGCTGCGGTG 61884 29 100.0 32 ............................. TTGATCGTGACAAAGACGCCCGCTCCCGCAGC 61823 29 100.0 32 ............................. CTCATCATGTCACCCGCCACTTTTGCAGCCCG 61762 29 100.0 32 ............................. GAATACGCGGAAGCCATTCAAGATGGTGAACA 61701 29 100.0 32 ............................. TCAAGCGCATGTTCTCCGCTTAGTCCGCGGTC 61640 29 100.0 32 ............................. GCATTTTTGCCCTGATGAGGGCTACGGCGCGT 61579 29 100.0 32 ............................. GATGCGAGCGGGCTTCTGGTTGGCTGTTTTGA 61518 29 96.6 32 T............................ AGAAGGCTGTACAGAATATACGGGGCCAACTA 61457 29 100.0 32 ............................. TGGACTAGTCCGCGCGCGTGTTCTGGCGTTTC 61396 29 100.0 32 ............................. TATCCGGGCTATCAGATTCAGCGCGTGGAGCA 61335 29 96.6 32 A............................ GGGCTGCCGTCCGTCATGCTCATTGACGGCGA 61274 29 100.0 32 ............................. TGGAGCGAGCGCCCCAACATGGCCAATCGCTG 61213 29 96.6 32 C............................ CGCAGGATCGGCAGGGCCAAATCATCCAGCTT 61152 29 100.0 32 ............................. CTCGGCATCTGTGATGAGCCGATCCCGCTTGC 61091 29 100.0 32 ............................. GACGCGGACCGGGCGCCCGCACTGCGCACCAG 61030 29 100.0 32 ............................. AGGTCGCGCGCCTTTCTCGCCGTGCGCTCGTG 60969 29 100.0 32 ............................. GCGTGGGCGGTGGATTGGTATTTCTTGAGTGA 60908 29 100.0 32 ............................. CTCTAGCGGTCGCTTCAATTGCGTCGCGCAAT 60847 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.6 32 GGGCCTATCCCCGCGAGCGCGGGGGAACC # Left flank : TATGGCGGCTCCAACTCCCGTCAATCCCAAGCCCGTTCATTGAATCAGTCATTCAGAGCAGCCGAAAACCTGCTATAGATAAACAAGAACCGCGATCGACGTGAAGTCACCTGACCCGCTCGACAGCGGATAGGTCGAGCCGGCTGTGCTCACGCACCACCCGCACACATTCAGCCCACTCGTCGGCATCTAACCCGGCCGCCATGACGAACCGCGAGAGATTCGCCTGGAGATCCGCAGCCGGGCCGATGAAGGCCGCCTGACCACGCTCGCCGGCGGCGGTGACCGGCACCGCCAGGACGCCGCCGTCAGGCGTCAGGTGCAGTTCGGCGATTGCGGGCTCGGTGAGGGCCTCGCCGAGGACGAACCCGATGATGGTCGCCAACTGCTCGCTCATGTTCGGGAAGCGCGCGGGGTCGAGTTTGGTGCAGAGGGGGTCGGTCATGAGTGGAGGTTACCGCGAGCTGTTGGCGGAATTGTATGTTCGATTGCCTTCCGAT # Right flank : CCTAGCATATAAGACTCTGGCCTCGCAGGGAAAACGACGATTCCGAATTGTTAGAGATCGGTCGCGGCGGATTTCGCAGCCAGCCAGAGCCCGTCGATATCGACCAACTTCGTAGCGGGCGTGCCCAAAGTGCGGATTCCGAGCTCGCCGGTTTCCTTCGGATCGCGCCAAATCATGACGATGCTGCCGCGGGGTTCTTCGGCATGCCATTTCGAGAGCACGTTCCAGACGCGCGTTCGCACGCCGGCGTTGAGCTCGGGCGAGACATACACCGCGGGCGCGATTTCTAGCATCACCGAAGAGAGAAACCCTCGAAAACGGTCAGTGACATCACGCGTCACCACAACTGCCAGCGCCATCTGCCTCCTCCATGCGCAGAACCTGCTTGATGGTCTCAATCATGGCGCCGACGATGTTCTCGCGCCGGAACAAGGCACCGGCTTCCCGTCGCACCAGACGGTCGATGGTTTGACTATCGGTCTCGGCCTTCTTTGCGGCTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCCTATCCCCGCGAGCGCGGGGGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //