Array 1 3271074-3270701 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3271073 30 96.7 39 ............................T. TCATCTGGGCGAAGTATCACTATGACATCGCCCGTATCG 3271004 30 100.0 39 .............................. CATACCCGACGTGCTCGCTGGCTTCGAAGAGCATCTGAA 3270935 30 100.0 38 .............................. AATAAACAAAGTGTGCGCGAAAATTCACCAGAATGCCG 3270867 30 96.7 40 ...T.......................... TAGGATGTCGCCGTAAAGCCCCTAGCTTTAGCTTGTCCAA 3270797 30 86.7 38 ...............T.....CT......T TTGCGGATTATGTCGAATGAAGGAATGCACCTATATGA 3270729 29 86.7 0 ................CG-.T......... | ========== ====== ====== ====== ============================== ======================================== ================== 6 30 94.5 39 GTTCTGATAGTACCTATAAGGAATTGAAAC # Left flank : TTCCGACAGACGAAGGATGGCTCTATGTCGCGAGCGTCATGGACTTGTACACGCGCAAAATCGTAGGCTGGCACGCTGATGAGCGGATGACCAAGGAACTGGTCTTGCAAGCTCTGGACCAGGCTTACAGCCGTCAGCGGCCCAAAGGTAAGGTTCTTCATCATTCCGATCGGGGCAGCCAATACGCTTCCCATGAGTACCAACAACGGCTCCTAAAATACGGGATGAAGGGCAGCATGAGCCGCAAGGGCAACTGCTACGACAACGCCTGCATCGAATCGTTCCACAGCATACTCAAAAAGGAACTCGTTTATCTGGAAAAGTTCAAGACCCACAAGGAAGCGCAAAGCAAGATTTTTGAATATATCGAGTTTTTCTACAATCGCAAACGAGTCCATTCGGCGATCGGGTATCTCACACCCATTCAATGCGAACAAATGTACGATTATGTTGCGTAATTTTCTCGATTCCATGTGTCCAATCTATTGACAGAGGCCCAT # Right flank : TCCAGCTACCGCTCTTTGAAAGCTGATCAAACGCCCGAATTTGATCGTAACCTGTCATCCTCATCGAATACTGCGCTTCCTCGTCTGTCAACACATCCCATCCTATTTCCCGCCTGATTAGCTTCAAATCTCGACAATCCTTTTATTTCTTCAGAAGGAATTTGATGTGTAATTGTTGAAGTAAGCAGGACTTAGGAATTATCTGATTTGTCTTGGTAGTCTGTACAACAACAATAATCAACTCATGACGGAAGAAATGGAACGAAGATACTCCTGAGATCACTAAAAAATTGCTGGGTAAAATACATGAGATTCCCCAGTACTGACAGAGAGAAAGGAGAAAGTTCAATGAAAGTACTCATCATGACCGTGGGAGGAGATGACACTCCGCTGGTACTGTCCATCAAGGAATTAAAGCCGGATTATATCCACTTCATCTGTTCTTCCGGTCAAAATTCGAGCAGAGTGATGGTTATAGGAGATGGTAAGGTCTGCGGTAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGATAGTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 3273721-3272406 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3273720 30 100.0 37 .............................. AGTTGTTCACGAACGGGACCGATGTAGTCCTCTTTCA 3273653 30 100.0 39 .............................. CTCGACGAATTGCTGATCGACCAGAGTGACGAGCACAAG 3273584 30 100.0 39 .............................. ACGGTTCGAAAAACCATGATTGTATTCCGTCTTCCTCTC 3273515 30 100.0 40 .............................. CTCGAATCCACGAGTGATCGGGTACTGATCTTTTACAACT 3273445 30 100.0 40 .............................. TATTTAGTCAATGATTTCAACAAATCGGCTGTTTCCGATG 3273375 30 100.0 38 .............................. TCGCACTCGGGAACAACTTCGCCACGACTGAGGCCGAA 3273307 30 100.0 37 .............................. GATGCAAGGTTAGAGACAATAACCTTTTTACCTTCCA 3273240 30 100.0 35 .............................. AGCTCGAAAAGCTCGAGCAGCAGCTGCGCGATATG 3273175 30 100.0 36 .............................. ATTGTCGTGGCCGGAATGTCGTCGCCCAGGTTGACC 3273109 30 100.0 38 .............................. TCCTCGATCAATTTCAGCCGCGCTTTCGGCCACTTCGC 3273041 30 100.0 37 .............................. CCTTTCCGCAGAACCCGCGCCTGCGGGAACCGTCGGC 3272974 30 100.0 37 .............................. TCGTCAGCTGCCAGCCACGGTTCATATGTCCGGTGCG 3272907 30 100.0 39 .............................. CAGTACCTAGCGAAACGGGGTTCCATATGAACTACACCC 3272838 30 100.0 36 .............................. TGCGTTGCCCGCCACCATAAGCCTCCCGCATAAAGG 3272772 30 100.0 36 .............................. TCAGTCATTTCCCCATCACCGCCAGTAGAGCCGCTT 3272706 30 100.0 38 .............................. TTCCGCTCGTCAACGCCGTTATCGCCTTCGGGATCGTC 3272638 30 100.0 37 .............................. ACCCAACGATCATATGGCACTTTATCAACCCGTACCC 3272571 30 96.7 38 .............................T GGAAAACTCGTCCCCCGCTGCCACACATCGAAGTTGCC 3272503 30 100.0 38 .............................. GTCGTAAGTCCGAGGGGCGCGACATGCCGAAGTGTGAA 3272435 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 20 30 99.8 38 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : TAGACGGGTTTCCAGTAGGAACCGGTGCTTTCCATGGCGGCGTGGGTGCAACCTTTGCTCTTGATCCAGTCCACCATCTGCAACAGATCGTCGGTCATGGTCGAGAATGTGCGGATTTCTTTCTCGTCCGGCGTGATAATGCAGGCCACGACCGTCTTTTTGTGGACATCCAGTCCACAGACATGGCTGTAGACGACATCCATGATGGACAATCTCCTTGCGGCTTTGTCGATTGAGGGCTGGTGCAACGACCACACATGGGCCATTCTATCCCGCGTGCTTCCCGAGGGAGCGACAATCTGTGGTGCACCTGGTCGTTGGGGTCCGTCTAAGAGTCGGGCTCGCAGCACCAAGAAACAACGACCTCCCTCCACCAGCCGCAGGAATATTGTACCGCATTCGTCCATTTTCATCATCTGCTGGTGCCGCATTAGCGGCATGGGGGTCTATGAGGAATTGAAACCCGGTATATTCCGGCGTCCTTGAACCCGAGCACTATA # Right flank : TGTTTTCAATCTGACGTACAGCACGGATTCGTTCGGCGTTTTGTCACCACCGGACTATAATTGATGCTAGACTGAATAGTGGACACCGAGAATCGAGAATGCGACAATAAATTCAGCAAAATCGAGGTGTCCGAAGATGAGTCAAAAGTATGACAAAGACTTCAAAATCCAAACCGTGAGGATGATCCAGGAACAGGGAAAACCGGTGGCGCAAGTCGCTCGGGAACTGGGTGTATCCGACAATACCTTGTACCGTTGGATCAGCGAATTCAAACAGGATCCGGTCAACGCTTTTCGCGGCAGCGGCAATCTGAAAATGGAGGAAAAGACCTTCCTCGACATGCAGAAACGAATTCGCCAACTTGAGATGGAGAATGAGATTCTAAAAAAAGCGATGCACATCTTCGCAAAAGACCGGAACTGATCTTTTCGTTTATTCACAAGCACCGCTCCAAGTATCCGGTGTCGGAGATGTGCAGGATTTTGAATGGTGTATCCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 3277542-3275310 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3277541 30 100.0 37 .............................. AAATCAGCTTCTTCTGGACTTTCGGACTCATTATAAA 3277474 30 100.0 38 .............................. TCGAACATCGACTGAGCGGCCCGGTGCTCAGCGAGCGC 3277406 30 100.0 38 .............................. GGGTTATTGTCCCGCAGTTGGCAATGTCGGCTGGAACA 3277338 30 100.0 36 .............................. GTAAATGTATTATTCTACACGAATCCAAAAATATGC 3277272 30 100.0 37 .............................. ATGATCCCGACCAGCTTGGACGAATACGCCGGGTCGG 3277205 30 100.0 35 .............................. GCTGGAATGTCTTCTCGGCCGCCGCGCTCTGCTCG 3277140 30 100.0 39 .............................. CGTTGGCTCTCGTATTGAAGCTCATCCACTTCCGACTGT 3277071 30 100.0 39 .............................. CTCGACGTCCTTCATCGTCTCATCGGCCATCGGGACAAC 3277002 30 100.0 38 .............................. CCATTTCGCCCCCATCGAGGGCGGGAACTCGATTTCGA 3276934 30 100.0 39 .............................. ATTAACTGATGGAAATAAACCGCGATTCCGGCGGCCAGA 3276865 30 100.0 35 .............................. GAGCGACGGAGGCGCGGGGGGACGCTGTGACCATT 3276800 30 100.0 35 .............................. TTCGGATATAGTGTTTGTACATGCTTCATCACCTC 3276735 30 100.0 36 .............................. ACGACTATCGTCGGGAAAGTTCCGCCGTCCGGTTCG 3276669 30 100.0 37 .............................. TCTGGTACGAAGAGGCGGACGAGTTCGGCATTGAGGA 3276602 30 100.0 36 .............................. CGAGCCGGGCGTACCAACGTTCCGTCTTCTCGCGGA 3276536 30 100.0 38 .............................. TTTTCTGTCTTGATGGCATCGGCCAGCGACCGGTTCGA 3276468 30 100.0 37 .............................. TTCCCTTACCGGCCCCAGGTAATCTTCCTTGAGAACC 3276401 30 100.0 36 .............................. TGTAGTTTCGTCCTTCTGGGCCGTGAGATTCTATAG 3276335 30 100.0 36 .............................. TGGGAAGCATTTGGCATCTGCCCTCGATGCGGGCAG 3276269 30 100.0 38 .............................. ACATAGTTACGGGCTCAGGGTCATCAGCCCATTTCTTT 3276201 30 100.0 35 .............................. TCAAATCAAGAAAAGCAAAATTCGCTGGAAGCTAC 3276136 30 100.0 37 .............................. TCCCGATACCGATGCCGATTTTTCCGATTTGAACTCC 3276069 30 100.0 38 .............................. ATGAAACGCTATATCAAGGAGGGATGCGCCAATGCAAA 3276001 30 100.0 35 .............................. CTTTCCCTCCTTCCGCGCAATCGTCGCAAACCTTC 3275936 30 100.0 36 .............................. TCGATGATCAAATCTACGATCCCGGTGAACTCAGGA 3275870 30 100.0 39 .............................. TCACCAGACAACAAACGTCGACGAGCTGCTATACGGCGG 3275801 30 100.0 37 .............................. CCGCGCTGGTTGCGTCCTTTGAAACAATTCAAATGGA 3275734 30 100.0 37 .............................. TCCGGACGAGCCGACATTCGCGGGAATGCTGCCTTTC 3275667 30 100.0 35 .............................. ACGTCAGCGAATGCCGAAGTGATCGCGCCGACCGT 3275602 30 100.0 35 .............................. GGGATCGACTTGGTACAGTTTGAAATGCCCGTCTA 3275537 30 100.0 36 .............................. CCAGCCCATATGGCCAGACTGACCGACAGTCTCACA 3275471 30 100.0 36 .............................. CTGCGTCTGTGCATCGGATTGCGGCGCCGGCTGCTC 3275405 30 100.0 35 .............................. ATTCGTCCGCGATATTGACGCATGGTTTAGGCTCC 3275340 29 80.0 0 .................CCC...A.-...G | T,A [3275311,3275316] ========== ====== ====== ====== ============================== ======================================= ================== 34 30 99.4 37 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : ATAGACGGGTTTCCAGTAGGAACCGGTGCTTTCCATGGCGGCGTGGGTGCAACCTTTGCTCTTGATCCAGTCCACCATCTGCAACAGATCGTCGGTCATGGTCGAGAATGTGCGGATTTCTTTCTCGTCCGGCGTGATAATGCAGGCCACGACCGTCTTTTTGTGGACATCCAGTCCACAGACATGGCTGTAGACGACATCCATGATGGACAATCTCCTTGCGGCTTTGTCGATTGAGGGCTGGTGCAACGACCACACATGGGCCATTCTATCCCGCGTGCTTCCCGAGGGAGCGACAATCTGTGGTGCACCTGGTCGTTGGGGTCCGTCTAAGAGTCGGGCTCGCAGCACCAAGAAACAACGACCTCCCTCCACCAGCCGCAGGAATATTGTACCGCATTCGTCCATTTTCATCATCTGCTGGTGCCGCATTAGCGGCATGGGGGTCTATGAGGAATTGAAACAAAGTCGGCTGGCGCGCCTCGAGGCGCTGCAGGAGT # Right flank : TCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGTTTTTCCTTTAGCAGATGGTAGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCTTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACCCCCGCCCACGAACACAAATGAGCGGCAGACGGAAAGCGGCTCATGTCGGTCCCCGTTTCAGCGACAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 3280156-3279130 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3280155 30 100.0 36 .............................. TGATTTCCGCGCCGGGAAATGGGATGTAAAGGGCGG 3280089 30 100.0 36 .............................. CCGCTCTCAAGCTGAACGCTGCGGCGAGCCCGCGGG 3280023 30 100.0 36 .............................. CGTAAACAGTCCGTCAGGCCGCCAAGAGGTGCAGGA 3279957 30 100.0 36 .............................. ACGGGTGACCGAGCAAATGAAGTTTGTGAAGGTTCG 3279891 30 100.0 36 .............................. TCGATTCTCTCGTCGATTCCGGGTTCGTTGATCGGG 3279825 30 100.0 35 .............................. ACCGGCCTCGTGATGCCATGGGCCACTTTGTGAAG 3279760 30 100.0 35 .............................. TTGGCCTTCGTGCTGTCGCGCTGGAAGAATCGCGT 3279695 30 100.0 38 .............................. TCCAACAGGATTGAGCCGAGCACCGACACCTCTGCCTC 3279627 30 100.0 35 .............................. TTGAAAGTCTGGCAGACGACGGAGAACACTTACTA 3279562 30 100.0 38 .............................. GTGTTTCAGCGCTCGTATTTCGGCACGATGGCTGTTAC 3279494 30 100.0 36 .............................. TACTGCTGTTCAAACTGTTTATACTGCTCAATCTCC 3279428 30 100.0 36 .............................. CCGCCCTCAAGGTGGAACCGCTGCCTGCGCACGGGT 3279362 30 100.0 39 .............................. CGCCACCACATCACCTGTGTGGGTAATTTGCCGTGAACA 3279293 30 100.0 36 .............................. ACAAACCACGGCGGCGCCGGCACGCGTTCCGTTTGC 3279227 30 100.0 37 .............................. CGGTGTCGACGTGGGCGCCGTTGTCGGCGCGCTGATG 3279160 29 80.0 0 .................CCC...A.-...G | T,A [3279131,3279136] ========== ====== ====== ====== ============================== ======================================= ================== 16 30 98.8 36 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : ATAGACGGGTTTCCAGTAGGAACCGGTGCTTTCCATGGCGGCGTGGGTGCAACCTTTGCTCTTGATCCAGTCCACCATCTGCAACAGATCGTCGGTCATGGTCGAGAATGTGCGGATTTCTTTCTCGTCCGGCGTGATAATGCAGGCCACGACCGTCTTTTTGTGGACATCCAGTCCACAGACATGGCTGTAGACGACATCCATGATGGACAATCTCCTTGCGGCTTTGTCGATTGAGGGCTGGTGCAACGACCACACATGGGCCATTCTATCCCGCGTGCTTCCCGAGGGAGCGACAATCTGTGGTGCACCTGGTCGTTGGGGTCCGTCTAAGAGTCGGGCTCGCAGCACCAAGAAACAACGACCTCCCTCCACCAGCCGCAGGAATATTGTACCGCATTCGTCCATTTTCATCATCTGCTGGTGCCGCATTAGCGGCATGGGGGTCTATGAGGAATTGAAACACTTCCACCGCCGAGAACATGACATAGATCGTCCCG # Right flank : TCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGTTTTTCCTTTAGCAGATGGTAGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCTTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACCCCCGCCCACGAACACAAATGAGCGGCAGACGGAAAGCGGCTCATGTCGGTCCCCGTTTCAGCGACAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 5 3282978-3281744 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3282977 30 100.0 37 .............................. CGTGATGCACCTCGTAAAAGCTCGGCGCGATCAGGTC 3282910 30 100.0 36 .............................. TCGTCCGAATGTCGTCCAGATGTCGTCATTCATACC 3282844 30 100.0 39 .............................. CACTCAAGAAAGCTGTAAATAAAGTGCTGAATGAACAAT 3282775 30 100.0 36 .............................. TAGCATGGCACGCAGGAAACAACGGCCCCGGCAAAA 3282709 30 100.0 38 .............................. CAGGAAAGGAAGCCTCTATCGCTGGCGCCGTAAATAAC 3282641 30 100.0 40 .............................. AATGCCGACGACGCTCATCACCTGATGTTCGTCGTGGACT 3282571 30 100.0 40 .............................. ACCAGTACACGATGGTGATCCGCGAAGACATCAGCATCGA 3282501 30 100.0 36 .............................. GCCGCCGAGATCACGCTGGCCGTGAAGGAATATACC 3282435 30 100.0 35 .............................. TCGCACGGGCGACGAGTACGACGGTGACCGCGTGG 3282370 30 100.0 36 .............................. ATGGGTCGAGTTTCAGGAGTTTCTCGACCTGCTTGA 3282304 30 100.0 35 .............................. TAATGCTGTATAATGAAATCAGAAAGAACGAAGGA 3282239 30 100.0 36 .............................. AATACCCACATTGCGGATTCCTGATCCCATTCGACT 3282173 30 100.0 37 .............................. CATCATCGGCGTCCAGATCGTCGGATGGGAGGCGAGC 3282106 30 100.0 36 .............................. TCGCCCTGAATCTGCCCCATCAGGGCGAAATGCTTC 3282040 30 100.0 35 .............................. AATGCCGACGACGCTCATCACCTGATGTTCGTCGT 3281975 30 100.0 36 .............................. AGGATACGCCGCAGAATCCGGCACCGAAGCCGCCGT 3281909 30 100.0 39 .............................. GCGCGGCGGATCGGGCTCTCCATGGTGGAGCTCGACATG 3281840 30 100.0 36 .............................. TAATTCAGGAACAGCACGATGTCTGCCCATTCCTTT 3281774 29 80.0 0 .................CCC...A.-...G | T,A [3281745,3281750] ========== ====== ====== ====== ============================== ======================================== ================== 19 30 98.9 37 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : AGACGGGTTTCCAGTAGGAACCGGTGCTTTCCATGGCGGCGTGGGTGCAACCTTTGCTCTTGATCCAGTCCACCATCTGCAACAGATCGTCGGTCATGGTCGAGAATGTGCGGATTTCTTTCTCGTCCGGCGTGATAATGCAGGCCACGACCGTCTTTTTGTGGACATCCAGTCCACAGACATGGCTGTAGACGACATCCATGATGGACAATCTCCTTGCGGCTTTGTCGATTGAGGGCTGGTGCAACGACCACACATGGGCCATTCTATCCCGCGTGCTTCCCGAGGGAGCGACAATCTGTGGTGCACCTGGTCGTTGGGGTCCGTCTAAGAGTCGGGCTCGCAGCACCAAGAAACAACGACCTCCCTCCACCAGCCGCAGGAATATTGTACCGCATTCGTCCATTTTCATCATCTGCTGGTGCCGCATTAGCGGCATGGGGGTCTATGAGGAATTGAAACAATGCTTCGCAGGATCAGGAACTGAATATACGATACAG # Right flank : TCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGGTTTTCCTTTAGCAGATGGTAGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCCTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACCCCCGCCCACGAACACAAATGAGCGGCAGACGGAAAGCGGCTCATGTCGGTCCCCGTTTCAGCGACAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 6 3285002-3284569 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3285001 30 100.0 36 .............................. ACGGATAGGGAACGAGAGATATTTCTGATGGCTCAC 3284935 30 100.0 36 .............................. ATGTGCGGAGACGCGACCTTTATCACGGACGTGGAG 3284869 30 100.0 38 .............................. TACCAACCGAAGATCGGCCGTACACGCAGTACTACATC 3284801 30 100.0 38 .............................. TGGCGAAGGCAACCCGGTCGGTTTTGTTCCGACGGAAA 3284733 30 100.0 38 .............................. ACGGATATGACGGTCACGAAGTATTCGGACAGTATCAC 3284665 30 100.0 36 .............................. GAAGCGTGGAAGCGGCTAGTGGAGCACAGCCGTAAC 3284599 29 80.0 0 .................CCC...A.-...G | T,A [3284570,3284575] ========== ====== ====== ====== ============================== ====================================== ================== 7 30 97.1 37 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : TGATCAGGAATATGAGCCTTTCGAGGCACTGTGGTAGCGGGTTTCTTAGGAGCTGAGGAGCGGATATCGATGTTTGCGGTTTTGGTCTATGATGTTGGGGAGAAGCGCGTTGCCAGGGCACTCAAAACTTGCCGCAAGTATTTGACATGGGTACAGAATTCGGTATTTGAAGGTGAGATCAGCGAAGTTAATCTGAAGAAGCTGAAAGCCGAATTGAAGCGGGTCATGGATGAGGATGAAGATTCCGTCATCATTTATACCTGGCGAGTTCAACGATACAGCAGCCGGGATATATTGGGTGTTGAAAAAGGCAACATTGATTTGTTTATCTGAACTGTCGTCGACCCCCGGTGGCGCAAAAACCCCCGGGGGTCGACGACAAGTATGGGATTTGGAAAATGCTGATCTATCAAGGGTTGTGTGATATACTGGGTGCGGATGATGTTAAGATGGGCTGAAATGCGCTGAGAAAAGAACTTGATTTCACGAGGATTTTTGGG # Right flank : TCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGTTTTTCCTTTAGCAGATGGTAGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCTTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACCCCCGCCCACGAACACAAATGAGCGGCAGACGGAAAGCGGCTCATGTCGGTCCCCGTTTCAGCGACAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 7 3299058-3298556 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3299057 30 100.0 38 .............................. TTTACATATGGCGTCGCGCCGTATTCTCCGCTGTCTGG 3298989 30 100.0 36 .............................. TCACAGATAGCCGTAATGTTTTCAGGTGCTATATAG 3298923 30 100.0 36 .............................. AGGATGAGAGGGAGAAACCGGACATCGTGGCGTTTC 3298857 30 100.0 40 .............................. TGATGATCTGGAAGTTTGTACACCTTTTCGCTCTCCACCT 3298787 30 100.0 37 .............................. TGCTTTGTCGCTTCCGGCGCGAAGAGCGGATAGATTC 3298720 30 100.0 35 .............................. ACTCCAGCGTTATGACGGCGACGGTAAACTCCTTC 3298655 30 100.0 39 .............................. TCGTCAACGTTCAACTCAATCGTTTCTCGCTTTTCGATC 3298586 29 80.0 0 .................CCC...A.-...G | T,A [3298557,3298562] ========== ====== ====== ====== ============================== ======================================== ================== 8 30 97.5 37 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : ATAGACGGGTTTCCAGTAGGAACCGGTGCTTTCCATGGCGGCGTGGGTGCAACCTTTGCTCTTGATCCAGTCCACCATCTGCAACAGATCGTCGGTCATGGTCGAGAATGTGCGGATTTCTTTCTCGTCCGGCGTGATAATGCAGGCCACGACCGTCTTTTTGTGGACATCCAGTCCACAGACATGGCTGTAGACGACATCCATGATGGACAATCTCCTTGCGGCTTTGTCGATTGAGGGCTGGTGCAACGACCACACATGGGCCATTCTATCCCGCGTGCTTCCCGAGGGAGCGACAATCTGTGGTGCACCTGGTCGTTGGGGTCCGTCTAAGAGTCGGGCTCGCAGCACCAAGAAACAACGACCTCCCTCCACCAGCCGCAGGAATATTGTACCGCATTCGTCCATTTTCATCATCTGCTGGTGCCGCATTAGCGGCATGGGGGTCTATGAGGAATTGAAACCCTGTTTTCAGGCTTCTATAATTCACAACCACCTCA # Right flank : TCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGTTTTTCCTTTAGCAGATGGTGGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCTTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACCCCCGCCCACGAACACAAATGAGCGGCAGACGGAAAGCGGCTCATGTCGGTCCCCGTTTCAGCGACAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 8 3300944-3300714 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 3300943 30 100.0 35 .............................. CCGAAAGGCGCACAACGTACCGTCACAACTCCGGC 3300878 30 100.0 40 .............................. ATGGATAACGCACCCGCGCGCGAGACATTCGAACAAGCAC 3300808 30 100.0 35 .............................. TGGCGTATCAGGCCGTCTGGGAACTTCAGGGCATC 3300743 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 4 30 100.0 37 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : TAGACGGGTTTCCAGTAGGAACCGGTGCTTTCCATGGCGGCGTGGGTGCAACCTTTGCTCTTGATCCAGTCCACCATCTGCAACAGATCGTCGGTCATGGTCGAGAATGTGCGGATTTCTTTCTCGTCCGGCGTGATAATGCAGGCCACGACCGTCTTTTTGTGGACATCCAGTCCACAGACATTGGCTGTAGACGACATCCATGATGGACAATCTCCTTGCGGCTTTGTCGATTGAGGGCTGGTGCAACGACCACACATGGGCCATTCTATCCCGCGTGCTTCCCGAGGGAGCGACAATCTGTGGTGCACCTGGTCGTTGGGGTCCGTCTAAGAGTCGGGCTCGCAGCACCAAGAAACAACGACCTCCCTCCACCAGCCGCAGGAATATTGTACCGCATTCGTCCATTTTCATCATCTGCTGGTGCCGCATTAGCGGCATGGGGGTCTATGAGGAATTGAAACACGAAATGCCGAAGATCACATACATGGCCAAACTGA # Right flank : GTAGCGATCTGTACCAGTGTAGTCCATGCGGATGTAGGTTTTGATCTTACCTATCCCGAAAATAATAGTCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGTTTTTCCTTTAGCAGATGGTAGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCTTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 9 3302762-3302534 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3302761 30 100.0 35 .............................. ACACCGGTGACGACAGCGTGGGTGAGATCGTGGCC 3302696 30 100.0 36 .............................. CGATCTCTGTTCCGCGCCTGCCCATGTACATGCAAA 3302630 30 100.0 36 .............................. CATACGGATTCTTAGCTCCATGTTCTCGGCATCGGT 3302564 29 80.0 0 .................CCC...A.-...G | T,A [3302535,3302540] ========== ====== ====== ====== ============================== ==================================== ================== 4 30 95.0 36 GTTTTGATCGTACCTATGAGGAATTGAAAC # Left flank : AACATCAACTTCACCGACATGGTGTACGCAATTCCGGCGTTCCTGATGATCGTCATCATGCCGTTCACGTACAACATCGCCAACGGCATTTCCTTCGGCATCGTGTCCTACGTCGTCCTGGCGCTTGTCGCCAACCTGGCCGGCAAGACCGCGGAGGACGGCAGCAAGTACAAGATCCACTGGCTCATGTGGGTGCTGGCGGTCCTCATCCTGGCACGCTACATCTTCCTGAACGGGGAATAATCAGAAGTTTGCGGAAGCAGCGCTGGACCGGCGCTGCTTTTTTTGTTGAGACGGAATATTGGCAGCTATTTTTTGAAACCTTGAATCGATGCTGTCGTCGACCTCCAGTGGCGCAAAAACCCTTGGGGGTCGACGACAAAAGCGAAGTTTGGAAAATACTGATATATCGAGAATTGTGTGATATATTATGGGTGAATCCGCGCACATTTGAGACAGAAGTGGATAGGTTGAAAGGTTGAATTTTCAGGATTTTTGGG # Right flank : TCGCTAAAAAGCACAAAAAGGCCAACCCACCGTTACATCGCTTCAAATTGGAAAATGATAGGGGATTATGCGGTTTGCTCCCGTTCTTTTACCATAACGTCATATCCTAACATTTCCAACTTCCGTATCGCTTGTCGGGCCATCTGTTCACGCCGGCGTTCTTCGTAATAATGAGGCCCCAGTTCGTTGTAAACCTGTTTTTCCTTTAGCAGATGGTAGACGATGGTCAGGATCCGATGGGCCACCGCCACAGCCGCCCGATTGGCCCCTCGTCTGGCGGCAATGCGATGATATAGACTGGACAGATACGTGTGTTTCGTTCGGACTGCTGCCCGTGCCGCCTCGATGAGAGCGCTCCGAAGCTTCGGATTCCCTTTGGTCGTTCGCCCGGACTTTCGTTTCCCAGCACTTTCGTTGTTCCCTGGAGCCACCCCCGCCCACGAACACAAATGAGCGGCAGACGGAAAGCGGCTCATGTCGGTCCCCGTTTCAGCGACAAT # Questionable array : NO Score: 8.61 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 10 3418362-3421140 **** Predicted by CRISPRDetect 2.4 *** >NC_019897.1 Thermobacillus composti KWC4, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 3418362 32 100.0 38 ................................ AGGCATCGGCCATTCACTTGGTCCCGTCCTGCCCGGAG 3418432 32 100.0 34 ................................ ATGTACAACGGATCCGGGCGTATCGTAAAACTGG 3418498 32 100.0 38 ................................ CTTGTAGGTACGATAGCGGCTTCCCGCGACCATCGCCC 3418568 32 100.0 34 ................................ AGGATCCGCGCAAATTTCTGGCTGGTCTTGACAA 3418634 32 100.0 37 ................................ ATCTCCCGCAGCCGTTGCGTCCATGCCGCCGACACGT 3418703 32 100.0 35 ................................ TCTATATACGCGCATATACGTGTATGCGCGCATAA 3418770 32 100.0 34 ................................ TATTTTCATTTTCCAGCCCGTCTTTTATATTTCC 3418836 32 100.0 35 ................................ ATGTACAACGGATCCCGGGCGTATCGTAAAACTGG 3418903 32 100.0 38 ................................ CTTGTAGGTACGATAGCGGCTTCCCGCGACCATCGCCC 3418973 32 100.0 38 ................................ GATCAATTTTCGCTCGTTCGTGGTCGGTTTGTATTCGT 3419043 32 100.0 37 ................................ CAATTCATGGCCCGCCGGAATCTCGAATGCCAATCCA 3419112 32 100.0 35 ................................ CTGTCGCCGAAGATTTTGGGATACCAATCCTTTTA 3419179 32 100.0 36 ................................ GCGTTGATTTCGCGTATCTTGGCGAGGTCCCGATAG 3419247 32 100.0 39 ................................ ATCTTATTCGCACGCTACCCCGTCGCCATCTCGATCCAA 3419318 32 100.0 36 ................................ ACTGCTTCGCCTTCGTCGTTGTATGCCCGTGACCGG 3419386 32 100.0 40 ................................ ACATCAGCGAATGCCGAAGTGATCGCGCCGACCGTCGCGG 3419458 32 100.0 38 ................................ TCCGAGACCTTGCCGGTCATCGTTGGGTGAGCGTGCGG 3419528 32 100.0 34 ................................ CTCCTTCTGCATTTCAAGTTTGATATCACTTAAA 3419594 32 100.0 37 ................................ CTCGCTCATACGCTCACCTCAATTACAAGCGCTTCAG 3419663 32 100.0 34 ................................ AGATCCAAGAATCGTCTGCAAGGTTTGCAGCCCC 3419729 32 100.0 34 ................................ AAGAAGGGCCTGCGCAAACGTCTTGAATTGTTTG 3419795 32 100.0 37 ................................ CTCGCTCATACGCTCACCTCAATTACAAGCGCTTCAG 3419864 32 100.0 36 ................................ CGCCACAATGGCCGCCCCTCGAACACGGCGTCCGGC 3419932 32 100.0 36 ................................ ATCTCACTTTTCGCAAGGCCAAGTTTTGGATAACTC 3420000 32 100.0 38 ................................ GCACAAATGGAACAACTTTTGGATGAACAACTCGGCAA 3420070 32 100.0 34 ................................ CGTCTGCTGTAGTTGTGTTCAGGCCTGGAGTGCC 3420136 32 100.0 37 ................................ ACGGCATTGCGGTTCAGCCTATTGATTGCGGTTGTCA 3420205 32 100.0 35 ................................ GGGGGTGTTGAAATGGCGACGAACACCGTCAAAGT 3420272 32 100.0 36 ................................ TGCGAAGAATACTTCAACTGCGAATACTGGTGGCGC 3420340 32 100.0 36 ................................ ATCGCCAGCGCCAAATTGAAAGCTACAATATCACGC 3420408 32 100.0 33 ................................ CTCATCCGCGTATGCAAACGGGTCAAATGCCGT 3420473 32 100.0 35 ................................ TGGTACGTGCGGATCACGTTGTACCGCTTACCCTC 3420540 32 100.0 35 ................................ CCATCTCAGCCGCCGACCGCTCTTGTGTCAGCCCC 3420607 32 100.0 34 ................................ CTGATAGCAGAGGTCGAACAGAACCGTGCTGTCC 3420673 32 100.0 34 ................................ GCGCGGGATTTCGAACGGCTCGACGACGTGAATG 3420739 32 100.0 34 ................................ CAGCGCGGCGAGATCAGCGAAGGGCAGTACCGGG 3420805 32 100.0 35 ................................ GTAGGAAAAACAATTGATAGCGAAATCCCGGTTTA 3420872 32 100.0 35 ................................ TCATTAACGCCCGTTGTTCTTCCTGCAGGCGCTTG 3420939 32 100.0 35 ................................ TCATTAACGCCCGTTGTTCTTCCTGCAGGCGCTTG 3421006 32 96.9 34 ...............................T ACCGCCGAGACGCTCACCGGGCGCAAGCGGACGG 3421072 32 71.9 5 T.T......CACAT.....T.....G...... TCGAC Deletion [3421109] 3421109 32 75.0 0 ...T.....CACA..A........A...T... | ========== ====== ====== ====== ================================ ======================================== ================== 42 32 98.7 35 GTCGCCCGCTGTGCGCGGGCGTGGGTTGAAAC # Left flank : CTGTACCGGCTGGAGGGCTACATCTCCGCGCCGCTCGCCCAGCAGACCGGATTCAGCGAGGAAGATCTCGAATTGTTGTGGACAGCGCTCATCAATATGTTCGAGCACGATCGCTCGGCCGCCCGTGGAAAAATGGCGTCACAGAAGCTATTCGTCTTCAAGCACGACACAGCCCTTGGAAATGCCCCTGCGAATAAATTGTTCCAACTGGTTCAAGTGCAACGCAAAGACGGCGTAACCGTTCCCCGCTCGTTCAATGACTATGAAGTGACAGTGGGTACAGCGCCGCAAGGGGTCGCGATTATCGAAATGCTCTGAGGGAGGTTCCATCGGTGCGAACCCCAAGCGCACATAAAACTCCCGGGAGGTTCGCACTCCTTGCGGGACAAGGGGCTGCGGCTTCAAAGTCTATATAAGATGCTTACCTTATGCTGCTGAATGGAAGGTTCGCGAAAATGCGGCTTTCCGCCCTTGCGTATCAAGGGGTTTCAAGTGGTGCA # Right flank : CTACCATGAAACCGGGCCTAGATCAAAAACTTTGTCGAGCCCCGGGGAGCTGCAGCGTGGCATGCACGCTGCAGCCGCTCCGCCAGAGCCTTATTCGCCGTTGATCGCGCGCAGCAGCGTGTGCCGGTTCAGGCGCACCACATGCGCCCGGCGCAGCGCTTCGTCGCGCAGCTCGGGCTCGATCCCGAGCTCGGCCGGAACGGCGGGGCCGCCGGCGGCGCGCAGCAGCCGGCGCAGCTCGTCGCCGTCCGGCAGCTCCGCCAGCATGCGCCGGCAGGCGTCGGGCAGCGGCCGGCCTTCCGCCGCATACCGCTTGTACAGGTCGGCGACCTCCGCGCAGGCGACGCCCACCTTCGCGCCGTGCAGCACCTGCCGGCGGCCGGTGCGGAGGAAGTGCATCTCCCAGTAATGGGAGATGTGATGCTCCGCGCCGGATGCGGGATGCGACTGCCCGAACCGCAGCAGGGCGATGCCCGATTCGATGAGCGACTGCATCAGGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCGCTGTGCGCGGGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //