Array 1 40100-38174 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSJF01000011.1 Bacteroides fragilis strain AM31-13AC AM31-13AC.Scaf11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 40099 35 100.0 33 ................................... TTTGTGCTTTTATTAATCGTTATCTTGACTGGT 40031 35 100.0 35 ................................... TTTGTCAGCGGTCTGATTTACGCATGCGGTGCAGA 39961 35 100.0 35 ................................... GTGCCGAAGGAGCTGTTTCTCTGTATATCTTATTG 39891 35 100.0 39 ................................... ACTGAAAAACTTGCCCCACGCAATTTCGGTAATAAAAAA 39817 35 100.0 37 ................................... AAAAGATGTGATAATTTGTACCGGCATTCTGGTAACT 39745 35 100.0 33 ................................... CGGCACTTGTTATGGCATCCTTGCTAATTTAAG 39677 35 100.0 36 ................................... AATTGGCGTAACCGGTTTCTGGAAAAAGCGTGAAGT 39606 35 100.0 40 ................................... AAAAAAATTGTCCGATAACCTTAAAAAAAACAATACCATG 39531 35 100.0 37 ................................... CAATATTACCGAGCTGAAGGGTTTGTGTCCTATCTGT 39459 35 100.0 32 ................................... GTTCGCTCAGAAGCTAAAAATCACGGTTTGGA 39392 35 100.0 37 ................................... ACAGCGGCAACAGATGGAACCGTTTACACCTATACAT 39320 35 100.0 35 ................................... AGTATACAATGAAGGAATTTTGTACTTCAAAGGAG 39250 35 100.0 33 ................................... TTGGCGGTGCATTTGGTTGGCTTATCGGGTCGA 39182 35 100.0 34 ................................... TTTACAACATATGTTAATACCAAAGATATTACGA 39113 35 100.0 34 ................................... TTTACAACATATGTTAATACCAAAGATATTACGA 39044 35 100.0 34 ................................... TTTACAACATATGTTAATACCAAAGATATTACGA 38975 35 100.0 35 ................................... TGAAGGTATCGGTGTAGGGCAAGCGGCAACAAAAA 38905 35 100.0 36 ................................... TCATGTACAGCGGTCCTTTGTGATTAATATAATAAG 38834 35 100.0 36 ................................... TATTATTGCTCTTGGGAACAATATCATTACTTTTTT 38763 35 100.0 34 ................................... TACAGTTTACCCCGCAATGGTTACAATCGACGGC 38694 35 100.0 35 ................................... AATATTTTTGAGTGTTATGTCATCGACCCCAAAAT 38624 35 100.0 36 ................................... ATTTATATCAGCTGCCACCGGCAAATGCTGAATATA 38553 35 100.0 34 ................................... TCTTTTGGCAATGGCTGTATTGATGTTGACAGCA 38484 35 100.0 33 ................................... AATGGATGTTTCAGCCAACCAATCTTGGAAGAT 38416 35 100.0 35 ................................... CCAATTAAAATTAAACAATTATGTGGACTTACATC 38346 35 100.0 33 ................................... ATCCTGTTAGGGTGCATCTGTGCCTGTATTAAT 38278 35 100.0 35 ................................... AATGTCAAAAGAAGGATTTGAAGATCTGATGTTGG 38208 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 28 35 100.0 35 GTCTTAATCCTTATTATACTGGAATACATCTACAT # Left flank : TAATATCCAAAGCATCTACAATGTAATTTACAACACGAACAAGATGGTTGGGAGATATTTTTTCCGATAAACGAACCGGAAAAGAACATTTTGGCTGGAGGTTAACTCTCTAAATACTATCTTAACTATTACTGTTAATTTTTCACAACGGTAATATGAGGCTTTTCACCGAAATAAACAATGGTAAAAGGGGCTATCCGACTTTTGGGGGGCACTTTGCTTTTGGGACAGCCCCGTAGTATTATCGCCTTTGTGTATTTTTGGTAAGCTATTCCACAGCTTATTAAAATAGTTACCAATAAATTAGTTCTGCCTCTCTTCTTCTTTTCCTGCTTATTGATCATTTTCCCAATGTTAAAAGCAATACCGAAGTCCATGACGATCTTATCCAAGCCGTTATGTCTGAACTTCTCCCCTTATTCTATTTAATGTAGTTAAATTTTTATATTGGAATACATCTACATGCTAATAAGGAAAGTTTGCAGTATTTCTGGGCATTG # Right flank : ATATTGATAATCAGATTATTATAAAATATGTATTCTATCTGTATAAATATATAATAACTTATTATTCAGTTAGATAGATGAAGTGTTGAACTGATTTTCGCAAATGTACTCTTTTTTTCTGTAATTTAAATAAATAATTTGTAGAATATAGAGATATTTAATTGATTATCACTTTGATATGATCGATTCATTATTCGCAAATGCCTGCTTCATTTGTTATATTATAGCCTATTTCGAAAATAAGATTAATCTTATATTTATAATTATCAGATAATAAGTGTATTATGTCAAAGAACGAATTGCTTATTTGTTTTTTTTCGCAAATGATTTACTAATATACAAAAAAGCTAGTTCTTTCGTAGCTTTTATACATTATATATTATTTTTCATTTAAAAGAATAAGCAGAAAATCAATGAATTAAACAAATTCTGATTTTCGCAAGAGGTTTAGACTATTTCGACGGTTTTAATTATCTTTTTTCGTATAGGTTGATATATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTATACTGGAATACATCTACAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //