Array 1 100590-96942 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUE01000004.1 Thermococcus sp. MV5 NODE_4_length_300417_cov_200.930371, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 100589 30 100.0 40 .............................. ACTCCGCATAAGATATTTATATTTTGAAGTAGGAATTATA 100519 30 100.0 37 .............................. AAATTTCATTCTCATCTGAAAATGTTACTTTTGGTGG 100452 30 100.0 37 .............................. CTTTTTCTACTAGAGAAAGAGATAAAGGAGTGAACGA 100385 30 100.0 37 .............................. TGGTACAATTAAGACAGGTTCATTCGTCTTTTATACT 100318 30 100.0 37 .............................. TTTCTGAAGTGTGCATCCTCGATTAGGATAACCTCAC 100251 30 100.0 36 .............................. AACTCTTTGATTGAAGAAGCTATTTTTTTAATCTGC 100185 30 100.0 37 .............................. TCGAAGGCATTTTTATCTTTTAAAATACGTATTTGAT 100118 30 100.0 37 .............................. ATATAGAGTTTGCTAATGCTTATCATGATGCTCACGA 100051 30 100.0 36 .............................. AATTTTTCTTTCAACCATTTCAAATCCTTGGCGACG 99985 30 100.0 37 .............................. TCTGGTAAATCAGCTTTAAACTCTAGTGAATCTTTAA 99918 30 100.0 37 .............................. TCGTTCCCGTTGCCCGACTTGTCCGTCCAGACATTGT 99851 30 100.0 38 .............................. TGATGAACGTCTCGGGACAGTTGAGCGATCGGGAGTTC 99783 30 100.0 37 .............................. ACGGTTACTCCAACGCCTACTCCGAGCCCAACGCCTT 99716 30 100.0 38 .............................. TTATTTAACAACGGATGATTTAACCATCTGAACTTCAT 99648 30 100.0 36 .............................. GCGAGCATTTTCACAGAACTAGCAATAGAACCGCTC 99582 30 100.0 38 .............................. ACCCCAACTCCCGAACCTACACCAACGCCGACTCCTGT 99514 30 100.0 37 .............................. ACTGGAGAGGAAGGAATGATAATTCTTGCAGTTGATA 99447 30 100.0 37 .............................. GTTAGATTCTTTTCATTTAGCTTGATGATTGCGACGA 99380 30 100.0 38 .............................. TCAGCTTTAAAGCTGATGTAAACAGGTTTTGTGCTCGC 99312 30 100.0 37 .............................. TGAGCATGGGGATCGCTACGGCGAACAAGAAAACCGC 99245 30 100.0 38 .............................. AGGAGAAGCCCTTGATTGGTATCAAGCTCCCATTTACT 99177 30 100.0 35 .............................. CGAGTTCCTTTTAATCATAGTTGTTTTAATCAGTT 99112 30 100.0 37 .............................. TAAATCTATTTCAACTATTTGTTGACCTTCTTCTAAC 99045 30 100.0 37 .............................. CAAAGGAAGTTGTTGAGGCTTATGAGGCCCAAGCTCG 98978 30 100.0 37 .............................. AATTCTACGGCAAAGCTCCCGGTGCGAGGGAAGGTAA 98911 30 100.0 36 .............................. CGACTGGATTCGTTTTAGATGTGTTCGGTTCAATAG 98845 30 100.0 37 .............................. TTAACTCCGTGCTCCAGTCAAGGGCCGTGGCCAAGGT 98778 30 100.0 37 .............................. GCAATCGGGTGATCAGGGTCAGGAATAAGATCATCAT 98711 30 100.0 38 .............................. ACGGTTATGCAGGCTTATAAGGCTTCAACGCAAGAATA 98643 30 100.0 38 .............................. CATGAGCTCCCGAACCCTCTCAACATCACGCCGATCGA 98575 30 100.0 37 .............................. AGTTCTGTAACAGTTGAAGCAGGAAAAAGCATTACTT 98508 30 100.0 38 .............................. TGAGCTTGAGAACTTTCTTCACGACTGTCGCAGAGAGC 98440 30 100.0 37 .............................. AGCTTGTTGAAAATGTATGAAACTTCTCTCTTTGAGA 98373 30 100.0 37 .............................. AACGTAAAGGCTATAACAACTTCGCTATATCTTGAGA 98306 30 100.0 38 .............................. TACAATTGACCATCTTTGATCATCACCAATTCGCCTTC 98238 30 100.0 36 .............................. AGAATTGCTCGCACTCAGATGTTGTTACATTATGGA 98172 30 100.0 37 .............................. AGCTTGTTGAAAATGTATGAAACTTCTCTCTTTGAGA 98105 30 100.0 37 .............................. AACGTAAAGGCTATAACAACTTCGCTATATCTTGAGA 98038 30 100.0 38 .............................. TACAATTGACCATCTTTGATCATCACCAATTCGCCTTC 97970 30 100.0 36 .............................. AGAATTGCTCGCACTCAGATGTTGTTACATTATGGA 97904 30 100.0 37 .............................. GGAAATGCAAGCATTATGAGGCCTACTACTGCACCAA 97837 30 100.0 38 .............................. GACTATTAATCCAGCTACAAAGGAAGTTACTGCAAAAA 97769 30 100.0 37 .............................. ATTGCAGGCAAATACCAGAGGAGTGGAATTGCAGCGA 97702 30 100.0 37 .............................. TATTTTGGGCTTATTCTGTATATATTCAACACAATTA 97635 30 100.0 37 .............................. TTGTATGGGTTCGTCATCCTGAACCTTCTCGTTGAAG 97568 30 100.0 36 .............................. TGAAACGCGCGAGAATCACAACGCTAACTTCTCTCG 97502 30 100.0 37 .............................. CTGAAAAAAGCAGGGCTCTCAACCCTCAGAATGGCAA 97435 30 100.0 36 .............................. GTGAGTGGGTTATAATATGGGATAACTGCTGCATCT 97369 30 100.0 36 .............................. TCTTTTCTAGGGCTTTTTTGACTTCTCGGGCTTTCA 97303 30 100.0 36 .............................. GCTTTTTCATATCACTCCCCTCCTCTCGAACCAGTA 97237 30 100.0 35 .............................. AGACATTAAAGAGACTAGTATGGCAAAAATACACA 97172 30 100.0 37 .............................. TCGATATGGTCCATGACGAAGAAATTTTCGAGTCTTT 97105 30 100.0 37 .............................. AATAGTACGAATGTCACAGTTAGAACCGCTATGGCAC 97038 30 100.0 37 .............................. ATCGTAGTCCGCTCTACTCTTCTTTACATCGTGGTGA 96971 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 55 30 100.0 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : TCACAAGGCTGAATAGATATCGAATAATTTTCGATACTCATTGAAAACCCCCGTTTTTTCTTTTTGCTCCTTTAGATTTCTTATTCTTAAATTTAATGATCTTCTATGGATTTTCAAACCTTTAATAACCTTTTGTTACTATTAAACAAAAAGTTATAATTTTATAAAATTTTGTAACGAATTTTTTTCGAAATATTAAACGGTGGCTTTTGCAAGCTTTTTTATATTCTCTTCTTATGGGAATTTAATATTTTCGTATTTTTAAAGTTTTTAGTCCTCTAAATTAAATTTAAGACCCTTGTTTCATTTGGCAACCTTCCTGAGTATTTTTGTTCATCGATATGGATATGGTTAGAGAAAGCTCTTTTTGGGCAGAACTCGTGTTTCGTGGTTTTAATTGGGGAGCTGTAATAGTTGGATTATTGAGCCTTTGAAGTAAACCTTATAAGATTCAAGTTTTCTAATACTTTTATAGGGGATTTAGGGGAAAATTCGTCCCT # Right flank : CTTTGGTGTATAGTTTCTTTATCACTGGGAACAATAAGGCTTGAAAAAGAAACAGTCACTTGGATTATACATACAAACCTAGCTTGTTAGGTAGAAAATTTGGAAAGAACAATACTTTTAAATGCTTTTCTGTATCCTCTTTTGATGATCGCCTTAGGAATTGAGGGAACAGCTCATACTCTTGGCATAGGAGTTGTTACAGAAAAAGAAGTTTTAGCCAATGTATTTGATACTCTCACGACCGAGAAAGGAGGAATACATCCAAAAGAGGCTGCAGAGCATCATGCAAAGCTTTTGAGATCATTATTAAAGAAAACCCTTAAAGAAGCAAGGATCTGTATAGAAAATGTAGATGTCATCGCTTTTTCTCAGGGTCCGGGATTAGGTCCAGCTTTGAGAGTGGTAGCCACGGCTGCAAGAGCTTTGGCTATAAAGTACAACAAACCTATTGTAGGGGTCAATCACTGTATTGCACACGTTGAGATTACTAAAATGTTTGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 57045-57541 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUE01000003.1 Thermococcus sp. MV5 NODE_3_length_304109_cov_146.503829, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 57045 30 100.0 37 .............................. ATCTTTTTACTTTCAGCATATGCGGCTTATTCACACA 57112 30 100.0 36 .............................. AGTTGCGTTAACAAATTGTCATAGAAGTATGGAGTA 57178 30 100.0 37 .............................. ATATGCTATTCCAGCAAACAACAAAACCAAACCGAGT 57245 30 100.0 37 .............................. GTTCTTAACTCTAGCGATTTCAAAGATCTCTCTCCCT 57312 30 100.0 37 .............................. CCGGATCAGATAGCACTCCAAAGCTCAATAAGAACAT 57379 30 100.0 37 .............................. AGCTTTCGATTAAAAAGATTTGGGAGGTGAGGGGGAT 57446 30 100.0 36 .............................. CAAAAAATAGCAAACAGCCCACAAAACCCAAAAAAG 57512 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 100.0 37 GTTCCAATAAGACTATAATAGAATTGAAAG # Left flank : TGCTTCTGCTGCATATGTTTGAAAATTTTTCGGTACTCGTTTTTGAGGGTTATTTTTAGTTTTTCTATCTTTAAATTGTTTATTTTTGGGTTTGGGGTTTTCTGAGTGATTTGGGACTCTTTAGTTACCAAAAGTTAGTATCAGACAATGTGTTATAGTTTCTCAGAATTGTTGTGACGAATTTTTTTCGAAATTTTGAAGGGAAGCTTCTAAGATCTTTTTTTAACTTTCCCCTTATAGAGATTTAACTTTTTCACTTTTGAAGGATTTATAATAGCTTAATTTTGGTTTAAAGTTTTCTTTGGATTTTGGGAGTCTTGTAGTCATTATTGAGCATTGGAAATTTAAAGCATGTTAAAGTTAGTGTTTTTAGAAAAAGTCTTTCCAAGGTTTTTGAGTCGAGGGTTGCCGGGTAGTTTTTATTAGCCCTTTGGAGAAAAGCTTATATAAATAAAGAGTTTTAGTACTTTTATAGGAGATTTAAAGGAAAATCTGCCCCT # Right flank : GGAAAAGATTTAGGAACTAAGACGTTTTGGAGGTGGCAAAGCTAGCTTAAAATCTCATCAAGCCTTTCTTCTTCAATGGCCTGCTTAATTTCCCGCGCAATTCTTCTTCCAGTGCTCATTGGTTCGTTGTATTTGATCCATGTGTAAGGGGAGCCGTTTATGAAAGGATTGGTTCCAGCTACAATTCTCGCTGAGATTTCAAAAACCACGAACTCCATATCTTCAGTAATCACACCCTCAAGACAGAATGGGCCCCATAAGCCGCCCATAAGTTTCTCTGAAGCCCTTATCACGTTCTCTCCAGCCTCAATAATGCCCATAAGGAGACTCTCCCTAAGGACTATTGGAATGTTCCCTATCACTGTGTAACTAGGTTCTATTCCAATTTTGAGTTGCTGTTCTGCATTTATCCTGCCTATTGCATCTGCATTGCTCTCATATCTCTTGTCGACACTCATGAGCTCAAGCTCTCCATTAAGTTTTGAGTAGAAAAAGTGGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTATAATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTCCAATAAGACTAAAATAGAATTGAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : III-B [Matched known repeat from this family], // Array 1 152948-155194 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNUE01000005.1 Thermococcus sp. MV5 NODE_5_length_274751_cov_137.192478, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 152948 30 100.0 37 .............................. TTATATCCTGTTAGTACTATTTTTCCGCTTGACAATG 153015 30 100.0 37 .............................. GGAGGGTATCGTTCAAAGCGTAACCTTGTTTAACACC 153082 30 100.0 36 .............................. GGAGGTCTTTCTGGATACAGGCAAATGCTGTGGGAG 153148 30 100.0 36 .............................. GGCACTTGGGGTGAGCTTACTGGTTCTCTACTAACT 153214 30 100.0 38 .............................. TTCAGGACGACAGTTATTTCGTCTATCTTATCGTCTTT 153282 30 100.0 37 .............................. CATCGTCGGCGAATCTAAAGTATATGCTTACATAAGG 153349 30 100.0 37 .............................. AGTAGACAAGCTAAAAGCAATATCAAAAGACGATAAG 153416 30 100.0 37 .............................. TCTTGATGAGAGCGAAGCGCAAGATTATAAGAATAAA 153483 30 100.0 37 .............................. TGCACTGATAAGAAGACTCTCGCGTATTTGTATTTCT 153550 30 100.0 37 .............................. GGCATAGAGGCAATAGAATACTTTAAAAAGTTTTACA 153617 30 100.0 37 .............................. TAAAGAGCGTTGAATGGGCTCGTGCACCGTACATCGG 153684 30 100.0 39 .............................. AACAAAGGAAGTGCGCTTTTTAGTCACAATCGAGGTCGA 153753 30 100.0 37 .............................. CTCTGAAAGGAGAGGTAGGAGGAGAAGGAGGAGATCA 153820 30 100.0 39 .............................. TGCTTAATTAACTCATCATAAATCGTTTTCTCGATATAA 153889 30 100.0 43 .............................. ATTTTTCAAGGTGATATGTCGACTGGTGCAGGTTTAGCTAATG 153962 30 100.0 37 .............................. TGGATAATTAAACAGTATGGTGTGACGGATTATGTGA 154029 30 100.0 38 .............................. TTTACTATTAGTTCCCTTAGCACATTACTTAGACCATA 154097 30 100.0 37 .............................. TTTGCATTAACTGCTGTGCAATTTGTATTCTCATCTG 154164 30 100.0 39 .............................. AATTGTTTAAGTTTTACAGATTATGTTCCATCAAAATGG 154233 30 100.0 37 .............................. AGTCAAAAAGCAGAAGAGATAGTTAAGAATAAAAAGT 154300 30 100.0 37 .............................. GAGGGCGACGCTTGGCTCATCGTTGCAGTGTTGTTCG 154367 30 100.0 36 .............................. AGCGGCCGAAGGCCGCGATGGGTTCCCCCCAATCAA 154433 30 100.0 38 .............................. GGAAGGGCCGACAATACAGGAGATCCTATGTGATCCCA 154501 30 100.0 37 .............................. ACCTTTGTGGCGTCCAGCTCCAGCTTAACTTGAAAAT 154568 30 100.0 35 .............................. TTAAATAAAAGCGTTGTATCACGGCAAAGCTCTAC 154633 30 100.0 36 .............................. ATCCATTTATAATGACCCAACAAACCCCCCGACCGA 154699 30 100.0 37 .............................. ACTCGATACGGCTCATACGGGTCGGAATTTGGATTTG 154766 30 100.0 36 .............................. TCGTGGATGAGGCAGCCTCCAGTGGAAAGAGTGGGC 154832 30 100.0 37 .............................. CTTGATGGAGTTAACAAAATGTAAGGAGATGTTTCAG 154899 30 100.0 36 .............................. TCATATTCAACTGGAAGTTTTTCCCCTCTTCCTAAT 154965 30 100.0 36 .............................. TCAGGTTTCTACAGAGGTTCTCACTCACCTCTATCA 155031 30 100.0 36 .............................. CCCTCTTGAGCCTTCTTGAGGAACTTCATAATGTCA 155097 30 100.0 38 .............................. TGCCCCGGCCGCCAGGAGAAGTCCCAAACAAAGAATGC 155165 30 86.7 0 .........................TC.TT | ========== ====== ====== ====== ============================== =========================================== ================== 34 30 99.6 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : ATAGACTTTATGAGGGATATTGAAAATTTTTCGTTACTTGTTTAAATGCGTTCTTTTTGGTTTTTCTCCTTTAAAATTATTTTTTCTTGGATTTTAAAACTCTTGGTTGATTTTCATCCCTTTAATAACCTTTTGTTACTATCAGATAGAAAGTTATAACTTTATAAAATTTTGTAACGAATTTTTTTCAAAATATTGAACAATGGCTTCTGCAACCTCCTTTTGTATCTTTTCCTTGTGAAGATATAACTTTTTTGGATTTTTAAAGTTTTTAAGTTTTTAAATTAAATTTAATGCTCTCTTTATCCTCGACACTCTTTGTGACAGTTTTTGTTCACTGTTATGAGAAGGCTAAAAACGTGGTTATTTGGATTAAACTCTTATCTGAGGGCTTGATTTAAAGGGCTTAGATAGCTTATTTATTCCCCCTTTGTGGTAAACCTTATAAATTTTAAACTCTTTAATAGTTTTATAGGGGATTTAGGGGAAAATTTGTCCCT # Right flank : TTATTGGTTTTATTTTTCATTTTATACATCTTCTACAGGTTTTGGGACAAAACCTATTCTCAATAGTTATATATTTTTGAATCATTTACGTAAACCTTAAATATATCAAGATAGTTAATCCAATGAAGCTACCTTCCCTCAGGGGGTATGAGTTTGCGGTTCCTAATCCGTTTTACTTCTGAAAGTTCAGAGTTTAAGATTCCTTACAATCATCAGCATTACCTTCAAGGCCTTATATATCGTCGAATTCAAAATGTAAACCCCGATCTGAGTCTCGCCCTTCACCGACCAAAGGTACCAAAGCTCTTCGTATATTCTTTATTCATGGCTGAAAACAGAAAATCTACCAAGGATTTGTCGTATTTTATTGGAAAAGGGAAAGCGTTCTTTTATTTCTCGACGCCCATAGCAGAGATAGCAGAAGCTTTTATCTGTGGTCTTCTTCAAAACCCAGAGGTTGTATTGTGGGACGAAAAGTTCTATGTTGAAAGCGTTAAATC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //