Array 1 55118-56974 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLRK010000013.1 Paracoccus sp. wg2 scaffold13.1-size79067, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================================================================== ================== 55118 29 100.0 32 ............................. GCCAGGGCCGCAGCGATTGAGCGGCTTGTGGA 55179 29 100.0 32 ............................. GCGTTGATGATAGCGAAAATACCTAGCGCGAG 55240 29 100.0 32 ............................. GTCGCTGCGGAAACGCCCCGCTGGGCGGCATT 55301 29 100.0 32 ............................. ACGGCCAACTCGTGCAGCGTCACGATGAGCAG 55362 29 100.0 32 ............................. ATGCCGCTGCCCGTGGCGCTGAAGTCCAGGCT 55423 29 100.0 32 ............................. ACGATCGACTGCACCTTTCCGGATTACCAGCG 55484 29 100.0 32 ............................. GTCCGGCAGGGGAACGCGGACCTGCGGGGGAA 55545 29 100.0 32 ............................. ACCAGCAGCCCGCTTTCCCAGTTGAACGTGCC 55606 29 100.0 32 ............................. ATGGTGACAGCCGCGTCGATGTCGTTCAGGTC 55667 29 100.0 32 ............................. TTTTACGTCACGGGTGGCGCCCATGGCTACAC 55728 29 100.0 32 ............................. CAATACGGCCTCTTCCTGGGCAATGTTGTCAC 55789 29 100.0 32 ............................. CCGGAACCGCCGCAGACAGGACCGAGCAGCGA 55850 29 100.0 32 ............................. GCGCGGCGCATCGCGATCCCGGTCGGGCCGGA 55911 29 100.0 32 ............................. GCGGCATAGGTCTCGCGCGCCGCCTGCGTGCC 55972 29 100.0 32 ............................. CTTTCGGGATAGCGCCGCCGTGCGCTCAAATC 56033 29 100.0 32 ............................. GCCGCTTGGGATTTCTCACAGTTCGCATAGGA 56094 29 100.0 32 ............................. GCCGCAGCCAGATCACCGCGCGCGAGATCGCC 56155 29 100.0 32 ............................. CTGGTAGAGCGCCGCGCCCTTCACGTCGAAGA 56216 29 100.0 32 ............................. GCAACCCGCCCCCGCCCATGGTGGCGGTCCTG 56277 29 100.0 32 ............................. GTCCGCGTGTCGTGCGGAAACACGCGGTCGTT 56338 29 100.0 32 ............................. GCATTGCCCGCATTGATGCGGTCCTGCACGGC 56399 29 100.0 32 ............................. CTGCCACCCGAACAGGACCGGCCCGGTGATAA 56460 29 100.0 32 ............................. CGGTGGACGGCGTTGATGTTCGTCTCGTGGTC 56521 29 100.0 32 ............................. TCCCACGACGTGTCCGTCAGGGGCTTGTCCGT 56582 29 100.0 32 ............................. GGCCGCATCGACCGCACACGCATTCCAGCCGC 56643 29 100.0 32 ............................. CTAGACCGCGACAGCGATGGTGTGCCGTGCGA 56704 29 100.0 32 ............................. GCGGCGGTCATCAGCACCAACGGCGGCGCGGT 56765 29 100.0 32 ............................. AACCTGGACGAGGCGACGGGCGGGGCTGTGTC 56826 29 100.0 91 ............................. CCTCTGGATCAGGGCATCGGTTGGGCCCGTCACTATTCCCCACATAAGGCGATTAACCGACAATGAGCGCCGATTTGTCCGCCGGCGTCAA 56946 29 72.4 0 T......T....CC...A.A.G.A..... | ========== ====== ====== ====== ============================= =========================================================================================== ================== 30 29 99.1 34 CTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : CGACGCCTTCCGCAGGACCGGCCTTCTGGGCAAGATCATCCCTCGGATCGAGGAGGTTCTGGAAGCCGGAGAGCTTCCCCGCCCCGAGCCGCCCGCCGATTCCATCGGCCCGGCCTTCGACGAGGACCGATCAGGCGACGACGGGCATCGCGGATGATCGTGGTCGTGGTGACGAACGCCCCGCCGCGCCTGCGGGGCCGCCTTGCCGCCTGGCTGGTCGAGGTCCGCGCGGGCGTCTATGTCGGCGACTATTCCGCCCGCACGCGCGAGATGATCTGGTCGCAAGTCACCGGCGGCATTGACCAGGGCGACGCCGTGATGATCTGGAGCGCCCCGAACGACCAGGGCTACGACTTCGCCACCACGGGCAAGAACCGCAGGATGCCTGTCGATTTCGACGGCCTGAAGCTGGTGTCGTTCTACCCGCCGAAGTCCCTGAAATGATCGGTGCCTTGCGGCTGATTGAATTTTTGCTGGTGGATCAACAAACTGCAACAAGT # Right flank : GTTTAAGTTGGATCAGGGGAATCAGCGGCGTCTCGTTCCTGCATTTACGGGAGTAATCTGCTGCAAAGCGCCTAACGAAACCGCTGTTCATGCGTTGACGGGCGATGAGCAAGCCCCTTGTATCTGATGATGTGGGGCGTCCGCCCCTGGTGTGATGATCGATTAGCCTTGGCCGGCATCATTTTCGTTCTGCGGTCCTGCATGCCCCTGGGAGATGCTGACCCGTGAGTTCAGCCAGCCGGGCTGCACCTGTTTTCCGCAACCCATGAAGCAGGCCGGGAACCTTGGCCTCGGCGCAGCGGTCGCGGAACCAGTTGCCAAAGGTTGCGGGCTTGTGGCCGACAGGCCGCGCGTCTTGGGTAATCAGCAGCAGTCGGTCCCCTGCCCTCGGCAACAGCCGTCATCCGCGCCTTCCGCAGGCTGGGCCATCCGTCCAAGTGGAATTTCCCGTGAGGGATCGAATCGGACCGTTGTGGCCTATCCGATCTTCCGTCGGGATC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //