Array 1 10424-12591 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMOG01000010.1 Candidatus Syntrophosphaera thermopropionivorans strain W5 contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 10424 37 100.0 41 ..................................... TTATGGAACCTTTTGGTGTTAGAAAGAAGATGCCACTTACC 10502 37 100.0 39 ..................................... AAAAATTGGTATTGTTGCTTAGGGTATGAGGATACCCCG 10578 37 100.0 42 ..................................... AATATAGGGGATTATTGAGCAGTCATTTTTATTGCTGTCTGT 10657 37 100.0 41 ..................................... TTGTCCCATCGCCTCTTTGGACCTTATCAGAGAAGTTGCGA 10735 37 100.0 34 ..................................... TCTTAATCCTACTTATCATTATCTACCCAGATAT 10806 37 100.0 35 ..................................... CTTATAATTTCGCTACCATCAGCTCTAACTCCAAC 10878 37 100.0 37 ..................................... TATACGTCTTTGTTCTCCGTAAGATATAACTTGCTCA 10952 37 100.0 35 ..................................... TTTACTTACTTTCCTATCCGGATCCCAGCTAAATT 11024 37 100.0 38 ..................................... TTACAACTTCATAGAATCCGGTATCTAACTCACGGACA 11099 37 100.0 41 ..................................... TTTCTAGGGCTAACTGAGTCTTTACCTGAGTCTTACGTAAT 11177 37 100.0 40 ..................................... TTGAATACCACTCTTGATTGAACTTTTCTTTGTCAGGCAT 11254 37 100.0 38 ..................................... ATGCAAACTCAATGTCTTCCCTCAACTGGGCTTTTGGT 11329 37 100.0 41 ..................................... TATAAATCGTTTTCCTTATTTATTAAAAACGATATTATATT 11407 37 100.0 41 ..................................... AATCGTAGTTAATATGTTATACTATAATAACTACGATATCT 11485 37 100.0 39 ..................................... CCATAGATCAATATGGAAATGGCTTCAACCCTTCTCTCT 11561 37 100.0 38 ..................................... TATTCATAATAGCTGTGATTACTATGTGTTCAATAACT 11636 37 100.0 39 ..................................... TATAAACTCGGATATTTTTTATTTCTAAAAATTCTAAGT 11712 37 100.0 39 ..................................... TCTCATCGTCCTTGACAACGAGTATGTAATTCTTCCCTT 11788 37 100.0 40 ..................................... AGTAATCCTCCAAAACGATTATAACACATCTTTCACCTCT 11865 37 100.0 42 ..................................... TATTAGATGGATAGTCATCTGGTTCGATATGAACCAATTCTC 11944 37 100.0 40 ..................................... CATCCTTTTCTCTAAAACCGAGAATTAGATGGTGTATCCC 12021 37 100.0 37 ..................................... CAATTCCAGCATCACTTCCAGGCTCTTGAAAAAGAGT 12095 37 100.0 35 ..................................... AATATATTGCTTCTTCCTCGTTATCTGGAAAAGCT 12167 37 100.0 40 ..................................... AATGAGGGACGAGAATCTGGTTTGATTTCCAATAAAGCTC 12244 37 100.0 40 ..................................... TCTGTCATCATACGTGGATAGATTCCAGTTCCAGTAGTCT 12321 37 100.0 42 ..................................... ATATTCCATCTTGAGAATCGTATGCTTCCTTATTCCATGAGA 12400 37 100.0 40 ..................................... TAAGTAAGTGGGCACTTTGGTAAGCCCTCGGCAAGCCTTT 12477 37 100.0 41 ..................................... TCTAGATAGCTCTCCCAGAAATCATCGTCAATAGTGTCACT 12555 37 97.3 0 ....................C................ | ========== ====== ====== ====== ===================================== ========================================== ================== 29 37 99.9 39 GTAAGAATTGAATTGACCCGTTTGAGGGGATTGAGAC # Left flank : TTGGCTCTCCCTTAGCTCTTTTCTTTGTAAAGTGCTAAGAGAGAGACAGATAGGAGATTGTAAATTCTATATTTATTCAATTCTATACAGGTCAATACTTTCACCTTTTCTTCTGTCAATTTATCACCTTCTAAAAGGATTATGCAATAAAATTGATTATGTTATCTACCTCATTGTCAATTGAATACGAAAATTGTTAGACTTGCAGAAAAAAATCATTGACAACTAAAATTAAGTTTATTTTAAGGAAATTAGAAGATTAAAGATGGAGTTTTGGACTGTGATTTGTCAGAGCAAAGCAATATTTGGACAACTTATTAAAAATGAAGGATTTAAGTCCATTTCAGGACAAAATCACTGTCCAAATCATATCTCACTATCTATCAATCAATTAAATAAGGTCAAAAAAAATACCCCCCACCCCCTCAACCACCTTTTTACTATCACTGTCTTTTTTGACCTTCCAACCCCTTGCTCTACAGTCACTTGAAAACGCCGCT # Right flank : CATATATCTCGGTGGCTTCTTTTCCGCATAAAATTAATAAATCAAAGCTATTTACTTCAATTTCATTTCTATATATAGAGGGACTTAAAACATAAATGGTTCCTTCTATATCTAATTATTCTTGAAAGGCAAAATGTAAGTAATATCCAAATAGGGTATCTACACTCACCGTGGAAAACTGGATAACCTGGTATTCTGTATTTGTTTTAATCACACAATGTGTATAGCGAGAAAATATATATGCCAAAATAACAGAAACATATGAAGAGATGGTTTCGGTTGGTGAGAACTTAAGTAAAATTTAGGCTGGTGGTTTCAGTGAGTTCAAGGCACAGATAGGAATGTAGGTAAAGTTGAATTCTAGGGGGAAAATGTTTCTGATAATCAACGAACACTTAATGCTTATGCGTTATGAGTATAATTGATATATAACTGGAGAGCTGATAATAATAATGGCACAACTATTTTTAAGTTTTTGCAAAAATAGGTTTAGATATGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAATTGAATTGACCCGTTTGAGGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //