Array 1 151005-150440 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGYK010000002.1 Enterococcus faecalis strain 4928STDY7071686, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 151004 37 97.3 29 ....................................C AGCCATTTGCCCACATGCCACGTGCGGCA 150938 37 97.3 29 ....................................T TCCTAAAAACACAGACAGAGATTTCAATA 150872 37 97.3 29 ....................................T CATTATACCCGAATAACACGCCTTTAAGT 150806 37 100.0 29 ..................................... AATCAACTATCCAGTCGCACATGTCCGCA 150740 37 100.0 29 ..................................... TCAAAAGCAGTTGTGAAGACACCTGAAGC 150674 37 100.0 29 ..................................... AAGCAGCCCATTATTGTTGCATTAGACAA 150608 37 97.3 29 ....................................G ACTGCTATCACGAGCGCTTTACATATATT 150542 37 97.3 29 ....................................C CAAGTTGGTACGATTACTCAAAAATTAGA 150476 37 67.6 0 ......T..C.........A.A..ACAA..T.TC..C | ========== ====== ====== ====== ===================================== ============================= ================== 9 37 94.9 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : GTAACGATGGGGAAAGTAAATGCTGTATTAAATTCAGGAGAAGAACTATACGATGTTTCAGAGGATAGACGTTTTGCTGTGTTAGACATGGGGTTAGAAGATTTAATGAAAATAGAAGAAGTTTGTAAGGAATATAAAAAACCAATACCAACAGAATTTAAATTAATCTATAACGTTGAAACAACAAGCTTTAATACAAAGTATAAATATGACCTTCAATATTCCAATAACGATGCTTTAACTGATTATGATCTCTTTATGTCGTGGTATGAAGAAGTTAAGAAAGAGGTAGAAAATCCACCATTGTAATTTGGATTTTAATAAATTTTCATTTTTTCTATTTATTCGAACAAAAAAATGGCTCTTTGTCAAATAATGTTGGTAAAGAGAAAGTTTGGTATAATGAAAGAGTAGAAACGAATCAATACATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : ACAAGCAATCCGTAATTTTTATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 155420-155185 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGYK010000002.1 Enterococcus faecalis strain 4928STDY7071686, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 155419 37 97.3 29 ....................................T GCAGACGTTGCTGCAAGTGTAGGGTCACC 155353 37 100.0 29 ..................................... TCCTCTGATTCAATCAATACAGCATAGTA 155287 37 97.3 29 ....................................T TCCAATTAGAATTTTTTCGCCCAAGACGT 155221 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 4 37 98.7 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : CATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATTATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAATGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : CATGGCGTGTCTTTTAAATGCTTTTCCTTGTTTTAGAGTCATGTTGTTATCTTCGAATGAAGAAGAGGAGTGCTAAAAGGTTACTGTTTCCAGTAGCCTTTTTTGTTATTTTTATTTCTTTCATTACCAAAGTTTAGTAAAATGAAAGTATCTTAAATTTTAAGTGAAATAAATTTAATAAAGGAGAACAATGATGGAAGGAAAGATTGTTTCAAGTACGAGTTCAGCCCAAACAGCTGTCTCAAAGTTGATTGGTATCAACGAGCGTTTAGAAGCCCCAAAGGTAACCTTTTCAGGAAGTACAGTTTCAGGAATGACCAAAGGCAAACAAGTGAATGCTCAAGTTTTAACAAACTTAACGGATTTAACCAATTGTGTCTGGAAGCAAGCTGAGAAATTCCCTCAAATTGCAGAAAAAATTGCTTATCGTGACCAACAATCTGCGGAACAATTCCGAGGAGGTGGGCGTTAAGTATGAGTGAAAAAGAGAGAAACGATGA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //