Array 1 126361-121235 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPAZ01000009.1 Campylobacter concisus strain AAUH-16UCdp 1102083, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 126360 30 100.0 37 .............................. TAACCAAAACAACAGCGGTGAAAAAATGCTAAATGGA 126293 30 100.0 35 .............................. ATTTCAGCAGTCGAAACAGCAGTAAAAAAAGCAAC 126228 30 100.0 37 .............................. GGTGTATTCTCGCCAAACCTGGATCGAGTAGAATTAA 126161 30 100.0 35 .............................. CCAAAATCAAGAACGCAAGAAGTAAAAAAATAAAA 126096 30 100.0 37 .............................. ACAAGAACTTGAGCAACACCAACACGATCAGAAAAAT 126029 30 100.0 36 .............................. TCTAAAAAGCTCTTTATCGCATTTAACCTTTGTTGC 125963 30 100.0 37 .............................. GCTTTGTAGCTTGTAGGGTGTAGGGATTTGTTAGGGG 125896 30 100.0 36 .............................. AGGGCGTATCTGTACTTTTTCAAGTACTTATACAAG 125830 30 100.0 35 .............................. TATTTGCGCCGTCATAGACGCTACGCACGTTTTTA 125765 30 100.0 38 .............................. ATATCCATTTCGATGTGTCGCTACCATCATGGATAAAA 125697 30 100.0 37 .............................. CGTTTTTAGATGACGGCATCACTCCGCAATTTGTAGA 125630 30 100.0 36 .............................. GTTTTGAGATATTTTTTGCGATGATTTCTTTCTCAA 125564 30 100.0 34 .............................. TCAAGGCTTGGCAAAAAAGAGATGGATTTATTAA 125500 30 100.0 37 .............................. CTTTAAATATAGGGCAGTTTAATATAGGTATAACAAT 125433 30 100.0 36 .............................. TCCGATCGCCCCTTAAAATGGTATTTCATCGGTGCC 125367 30 100.0 35 .............................. CTAGATAGGCAAGACGCAAGGGAAGCAAGGGCACA 125302 30 100.0 37 .............................. TTTACATTTTAGGAAAGGTTAGAAAAATGACACTTGG 125235 30 100.0 35 .............................. AATACATAAGCGAAAGAGAAATAAAAGAAAAAGAG 125170 30 100.0 38 .............................. TATTGCTTCCGCCCCAATCCCAACTCATTTTTTCCTCC 125102 30 100.0 35 .............................. TTGATGGCGAAAATAACAGAGGCGATAAAAGAGAA 125037 30 100.0 36 .............................. GTGCGATCTCTTGCTCTTTTGTGATTTGTGGGTCAA 124971 30 100.0 38 .............................. TTGATTAGGAAACATTCTCCACTCTTTGGCTAATTTTT 124903 30 100.0 35 .............................. GGCAGGTAGCTGCGACTTCTCAAACGGCGTAAAAG 124838 30 100.0 38 .............................. AAATCTCAAGAAAAAATTAATAGTGAAATTTCTAAATA 124770 30 100.0 34 .............................. ACATAGCCCCGAAAAGGTGTTTCGTCCAAACGGG 124706 30 100.0 35 .............................. ATCAAATTCCTAATTCTTCCGTGTCTGCTATTAAA 124641 30 100.0 35 .............................. TAAGTAGCTATATCACTTCTAAGAGTAGAAGGACT 124576 30 100.0 36 .............................. ACAAAAATCAATTTGACCGCACTGCTTGGTATTCTT 124510 30 100.0 39 .............................. TGTTTGCTAGGCTGAATTCTTGCGTGTTCTCTCTTTTCA 124441 30 100.0 37 .............................. ATGAAACCTTGATAACCTTTTAGGCTCTTAAGGCTCT 124374 30 100.0 38 .............................. TACAATCCCAAAATCTCCAAAACATTTAAAAGTTTTAG 124306 30 100.0 36 .............................. TCGCCCGCTTAGCCCCTGAAACTGGGGATTATTGCA 124240 30 100.0 38 .............................. CAGATGAAGAGATAGGGGGCTTAGGCAGCTCAAGATGT 124172 30 100.0 36 .............................. GGTTTATCATAACCTTTAAAAAACTCATCGCAAAGC 124106 30 100.0 36 .............................. TTAAGTTCAGCAATATATCTGTTTGAGTTATGCCAG 124040 30 100.0 34 .............................. GGGGCGTAGTCTTGTGGGATAAAGTCGGCGTATT 123976 30 100.0 36 .............................. GTTGGCTTTTGTAGCCGTTGATCTCACGGCGGTGGC 123910 30 100.0 37 .............................. GCCCTTTCCAAATTTCAATAAATGCGTCAAGTATTAT 123843 30 100.0 34 .............................. GAAGCCTTGCAAAGAGCTGGTGAGATAAGCGAGC 123779 30 100.0 37 .............................. GATATATCCTCATTTTGTAGATTGATCTTGTTCATCA 123712 30 100.0 37 .............................. ATAAAAAACTCTTACCTTTAAGGAAGTGAATATGCGA 123645 30 100.0 37 .............................. AAACTTGATCGTAAGCGACATTATAAGTAAGGTCTTC 123578 30 100.0 35 .............................. CAGATAGATAGTGCCAAAGATATAGCTCAAAGAGA 123513 30 100.0 34 .............................. GCTTTTGCATAGTCAGTGTTGAAGCTATCTATCT 123449 30 100.0 35 .............................. AGCTTACAATTACTGAAACAAATTTAAAAGATATA 123384 30 100.0 37 .............................. AATTTTGTGGAGCATAAAAAATATTTGTATAAATTCT 123317 30 100.0 37 .............................. CAAACTACAAGGGTACGAAAAAAATCAAGAAAAAATT 123250 30 100.0 39 .............................. CAAATATTGCAAAGAACATGACGAGTGGTGGGGCTATGC 123181 30 100.0 37 .............................. TGGATAAAGTCTATCTAAATTTAACAATTGAGCAATA 123114 30 100.0 37 .............................. ACTGCGCTTTATCGCGACGGCGAGGCATTTATCAAGG 123047 30 96.7 35 .........................A.... CGAAACCACAACGCTTGAAATACCAAACATCTATG 122982 30 100.0 38 .............................. TAAATCTAACAGACATAGCTGTAAAACTAAGGAGATAG 122914 30 100.0 35 .............................. CTCCCATTTAGCCTTCCAAAGTAAAGAGAGAGAGG 122849 30 100.0 37 .............................. TATCTGCTCCCTTAGCGTCGTTACCAAGAGCAGTTAA 122782 30 100.0 37 .............................. AACACCCAGTCGCCGTCATCGTCGCTTCGTTCATCAT 122715 30 96.7 36 .............................T AAGTAGCCCTGCGGATATTTGCTTGGATGAGCTGTT 122649 30 100.0 38 .............................. AATTTCTATATGGGGTCTCTTCACTCCCTGCTCGCCTA 122581 30 100.0 36 .............................. ATATTTGTGATAATAATTTAGAAGCGTCAAAGCTAG 122515 30 100.0 35 .............................. GTGGGATATGTTTTGCCAAGCGTTCAAAACTTCTT 122450 30 100.0 36 .............................. TCGCGAACGTAAATGATGTAGTGGTAGGAGGTATTG 122384 30 100.0 35 .............................. GCTACTGCATAACCTACGCCATCGCCTAATACACT 122319 30 100.0 36 .............................. TTCTTTCATCGTTCGTCATTTTCGTGTCCTAATCTG 122253 30 96.7 39 .....................T........ GGACATATATACCGCGCTGCGTATTTGCCAAAAGTGCCA 122184 30 100.0 36 .............................. TTAATCGACAGCGCGATCGATGATGTTTTGGATAAC 122118 30 100.0 35 .............................. CCAAAAAACCGATAGCTATGAATACAAAGACATTG 122053 30 100.0 35 .............................. CTTTTGGCGGTGGTAGCGACTGCTGCCGATAAATT 121988 30 100.0 35 .............................. TGGCCATATCTTTGGAATACGAAGAAAAAATGAAA 121923 30 100.0 36 .............................. TATTTTTGCTCGTCAAAGTATAGCTCATGAAAAAGG 121857 30 100.0 38 .............................. CAAGACCAAGAAAAGGCCATAATAGCCCCTGAGCTAGA 121789 30 100.0 35 .............................. GCTACTGCATAACCTACGCCATCGCCTAATACACT 121724 30 100.0 36 .............................. TTCTTTCATCGTTCGTCATTTTCGTGTCCTAATCTG 121658 30 100.0 35 .............................. AGCTTATTCTGGACGCGAGCAAAGGGCTAAGCAAA 121593 30 100.0 35 .............................. CCAAAAAACCGATAGCTATGAATACAAAGACATTG 121528 30 100.0 35 .............................. CTTTTGGCGGTGGTAGCGACTGCTGCCGATAAATT 121463 30 100.0 35 .............................. TGGCCATATCTTTGGAATACGAAGAAAAAATGAAA 121398 30 100.0 36 .............................. TATTTTTGCTCGTCAAAGTATAGCTCATGAAAAAGG 121332 30 100.0 38 .............................. CAAGACCAAGAAAAGGCCATAATAGCCCCTGAGCTAGA 121264 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 78 30 99.9 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTCAAAAAGTGCATCTGCGAGGACGCGCCTTATGAGGGCTTTAGGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTACACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : ATATGTTTTCAACTTCATTTTTAGTTTGACATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGATTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTGTCTTTGTAGTCTATAAAATCAATCTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTTTCTTCATAATACTCTTGTTGCTTTTTATTTTGTGGCTGTGCTTGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //