Array 1 81870-82557 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXE01000008.1 Candidimonas bauzanensis strain CGMCC 1.10190, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 81870 28 100.0 32 ............................ AAGCTTACCGGCGGCAGCAACGATATCGCCTT 81930 28 100.0 32 ............................ TTTACCGGGTCGTGCAGCACCATCTGGAGGAG 81990 28 100.0 32 ............................ TACGGAGCCATCATCCTTATCGGCGTCCTGCT 82050 28 100.0 32 ............................ CTATAGGCGTTGACCTCAACAGTGCGACCTGC 82110 28 100.0 32 ............................ AGCACGCTCTATGCATTGCCGGAATGGTGCAT 82170 28 100.0 32 ............................ TCCCCGACGACGTGTCTTTTCCCGATCTACAT 82230 28 100.0 32 ............................ GATGCACTGGGGTTCCCCGGGGACGCGGCCGA 82290 28 100.0 32 ............................ CGTCCGGGGCATGCGATTCATGTTCTTTGGTC 82350 28 100.0 32 ............................ TGCACGCGGAAATGCAGGAAGAAGCCCAAGAG 82410 28 100.0 32 ............................ CTGCAGCGCTTCGGCATCTTCGCAATCAGTGG 82470 28 100.0 32 ............................ TATCCCAATCTGAGATAGCACGACTCACCGGA 82530 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTCACTGCCGTGCAGGCAGTTAAGAAA # Left flank : CAAACGCTGATGGCAACCGACTGGTTGTCAGGCATGCGCGATCATCTCATCATAGGCCGTATGGCGGCAGTGCCGGAAGTTCATCAGCATCGCAGCGTACGACGCGTGCAGGCCCAGAGTAGCCCGGAGCGCTTGCGCCGCCGCTCGATGAAGCGCCATGGCCTGGATGCCGACACGGCTCGCAAACGCATTCCCGACTCCGCCCAGGAAACCCTCGATTTGCCGTTTTTGCGGGTTGCCAGTTCAAGCACCAGTCAGACATTTCTATTCTTCATAGAGCATGGGACATTGCTTCCAACGCCAGTTCCAGGACAGTTCAATACCTATGGCTTGAGTTCCAAAGCAACCATACCCTGGTTTTGACGTTTTTGCCCCTTTTTCTGTGGCAATTTATTGTTCTTTAAAAATCAGTAGCTTACAGAAGGAGGCAAAATTTTGGTGTTTTAAAGGAAACATGGATAACGTTTTGATGAAAAACGGTTTCTTTGTTTTTCTTTCTA # Right flank : ACCGCTGTAATAAAATTTGAGACGACCGTTAGCGTTCACTGCCGTGCAGGCAGTTAAGAAATTGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGTTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGTTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 83207-86777 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQXE01000008.1 Candidimonas bauzanensis strain CGMCC 1.10190, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 83207 28 100.0 32 ............................ CATTCGGCGTCGATGTTCTCGTACAAGGCAAC 83267 28 100.0 32 ............................ AGGAACATCGCGGCGCGCAGCGGCGAAACGAT 83327 28 100.0 32 ............................ ATTGGTAGGCAGCAGCGGCCCGAACTATTTCA 83387 28 100.0 32 ............................ AGACCCCGTGCCTGTGTGGCGACATTGAGACT 83447 28 100.0 32 ............................ TTTCGCATTGAGTCACGCTCCTTTCGGGCTTC 83507 28 100.0 32 ............................ ATCGCCGCGGGACCATGGGGAATGGTTGGCTG 83567 28 100.0 32 ............................ CAGGCAAGTGGGCGGTCAAAAAACACCGAAAT 83627 28 100.0 32 ............................ CGGATGACCTCTTGCGCGTCGGCGCACCGGCC 83687 28 100.0 33 ............................ GAGGAAGATCGCCGCCAGATCGCACGGGATGAA 83748 28 100.0 32 ............................ GCCGAGCGGTTGCCGGTGTTGCTGGCCGCCGA 83808 28 100.0 32 ............................ CTTAAACCATTCCTCAAACGCAGCACGGTCAT 83868 28 100.0 33 ............................ GGCGGCCTGACATCATGCGCAACTCGCCATCTT 83929 28 100.0 32 ............................ AATACCGCAGTAGCTCAAGGAGACAGCTATGT 83989 28 100.0 32 ............................ GGGGCGCGCTGGCAGACCGGTGGGGGAATCAA 84049 28 100.0 32 ............................ ATAAATTCGCATATACCCCTAAGGTATTCCGA 84109 28 100.0 32 ............................ CCCCAAACGGGGCTATTGTTGTTTTATATTTT 84169 28 100.0 32 ............................ TATGAAGAGTATAAGGCGGCACACGAAAGAAT 84229 28 100.0 32 ............................ TCGTGGAAGAGCTTTATCTGCGCAAACATCGT 84289 28 100.0 32 ............................ ATCCCAAACTGTTCGCCCTGGCAGCGCCAGCA 84349 28 100.0 32 ............................ GTTCATCTTGTCGCCGTAGCCGGCCAGCGTTT 84409 28 100.0 32 ............................ GTTTGTCGACCGGATCGCAGAGCATGCGCTTT 84469 28 100.0 32 ............................ ACAAGCAATTCGGTGGTCAGCTCGGCTTACTT 84529 28 100.0 32 ............................ AGTACAAGGAGCTAAACATGGACACGAATCAA 84589 28 100.0 32 ............................ AGAACGGCGTGCGAGTTGGCGCGATTGGTGGA 84649 28 100.0 32 ............................ GGATCGTTGCTTGCACAAGTGCTAGTTTCATC 84709 28 100.0 32 ............................ ATGTCATTCAAGGACGCGGCCCGAATCGCTAT 84769 28 100.0 32 ............................ TTTCGGCAAGGGGGACAAGGGCGACCAGGGAA 84829 28 100.0 32 ............................ ACGGGGCGTTCGTGTTGCTGACGTGGTGACGT 84889 28 100.0 32 ............................ TTCCGTGATGCCCAGGGCGGCGCTCACAAACT 84949 28 100.0 32 ............................ GACAGCGAACCGCGCGTGATGGAGTCGGCCAA 85009 28 100.0 32 ............................ TGATTCAGCGCGCGCACCAAAGCGGAATTGTT 85069 28 100.0 32 ............................ ATCTTGAGATTTCCAATCATCGTCTTCTGGCC 85129 28 100.0 32 ............................ ATATCTCGCGGCCAAGAAAAGACGAGCCAAGA 85189 28 100.0 32 ............................ ATTCGGTATGTGCTTTGGAGCGATCACGAGGA 85249 28 100.0 32 ............................ TCCCTGCTGGCCGGCCGAATGCGCCCGATGCT 85309 28 100.0 32 ............................ TCGAACACCGGCGACCAATCGGCGGCCTCGAA 85369 28 100.0 32 ............................ TTGGTGGGGGGTAAGCTGGGGTTATTCCTTTT 85429 28 100.0 32 ............................ TCGAACACCGGCGACCGCTCGGCGGCCTCGAA 85489 28 100.0 32 ............................ ATCAGGGGTGTAGACGCCGTTCACCATATTGC 85549 28 100.0 32 ............................ TAGATTCAAATAATCGCTGGAACCCTTCGCTA 85609 28 100.0 32 ............................ GAGCGGCGCGTATGGTGCAGCGATTGCGAAAC 85669 28 100.0 32 ............................ CGCTAGCGGCGCAGCTGGGCGCGATCAGTTCG 85729 28 100.0 32 ............................ AATCGAGGTCGCATTGTCCAGGCTCGCCGTCG 85789 28 100.0 32 ............................ TGGGTGGAGGGTCGCCCCATCCGACGTATAGT 85849 28 100.0 32 ............................ TATGGCCTTATACGGGATTCCTTGCTCATCAA 85909 28 100.0 32 ............................ TTGCGCAGCGCACTGCAAGCCGCAGTTGATTG 85969 28 100.0 32 ............................ AACTGCAATATTTCCCGTTGAGACGGGAGGAA 86029 28 100.0 32 ............................ CAAGGAAACGAAATGGAACCAACCAGCAGCAC 86089 28 100.0 32 ............................ AGATCCAGCCGCCTCCAATCTTGACTAGATAT 86149 28 100.0 32 ............................ GCTATGCTGGGCGTCAGCCGCAGCATGTTGTA 86209 28 100.0 32 ............................ TCGCCGACTGCATTACAAACCAGAGGGTCACG 86269 28 100.0 33 ............................ GCCGGCTCGACTCGCGATGTCGCAGGGTTTTAT 86330 28 100.0 32 ............................ GTCCAGGCGCAGCGTGCGGTCATATTCATTGC 86390 28 100.0 32 ............................ TCAAAGGCCATCAGCGAAGCCATGCCGCAGGG 86450 28 100.0 32 ............................ ATCACGCACCCGCACTTTGGGCCGGATCCGGT 86510 28 100.0 32 ............................ ATGTCCTGGGTGCAGGACGCCTCGTTGTCCTT 86570 28 100.0 32 ............................ ACACCAGGCCCGTGCCTGCGACGCAATCGTCT 86630 28 96.4 32 .................T.......... GGATGGCGTCAGCCGAACTACTACAGTGAACA 86690 28 100.0 32 ............................ GAAGTGGAAATGCCCCGATATAATGGCCTAGG 86750 28 96.4 0 ....................C....... | ========== ====== ====== ====== ============================ ================================= ================== 60 28 99.9 32 GTTCACTGCCGTGCAGGCAGTTAAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGGTGTTCACTGCCGTGCAGGCAGTTAAGAAAAAGAACGCGGCCAAGGCGAACATCAAGACGAC # Right flank : AATTGGATGACCCACATGCCCAGACCCGCGCTTTCGACAATAGACGTGCAACTGATCCGCGCCGCGGATCTCAAGCCCGTGCCATGGAAAAATGGCTCGGGCATTACACGCGAGATCGCGGCGCAGCCTCCGGGGGCCGCGTTCGACGCGTTCTCGTGGCGCGTCAGCATGGCGGATGTCGCCCAGGCGGGCCCCTTCTCGGTGTTTGAGGGAATCGACCGCATCATTGTCGTCAGGCGGGGCGGCGCCATGGTGATGAACAATACCGCCACCGGGGCAAGGCACATCCTGCGCCCGGGCGAGCCGCTGCGCTTCCCCGGGGAAGCATCGATCGAGGCCGAGCTTCCCGACGGACCCATCCAGGACTTCAACCTTATGTGGCGGCGCGGGCGCGCCGCCGGCCGACTGGATGTCCGCAGGAGCGGCCAGCGGCTGAGCCTGGACCAGGGCAGCGCCGTGCTGCATTGCGCAGAAGGCGCGTACCGCATCGCGGCCCCGGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGTTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGTTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //