Array 1 192900-188831 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAYE01000014.1 Brachyspira aalborgi strain PC3939II PC3939II_contig14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 192899 31 100.0 36 ............................... GGGAGCTGGGCGGGAGAGGACCTATTGCGAGTAAAT 192832 31 100.0 36 ............................... TTTAGGTCTAACTTCATATGTCCTGGATTCCATTTA 192765 31 100.0 36 ............................... CGAATATTTTGCTATCTTCAGTCAGTGCTGACGTTA 192698 31 100.0 36 ............................... CATCGTCGTTTACATCTATAAATACGAATTCTATTA 192631 31 100.0 36 ............................... TTTGGAAGAAGTAAAATGAATGTAATAACGTCAGAA 192564 31 100.0 37 ............................... TTTGTAAAGTGGAGTAGAGGATTAGGATTAGGCTGGT 192496 31 100.0 36 ............................... TGGCACTTCAGACGTATATTCTTCAAAGCCAGATAA 192429 31 100.0 36 ............................... TGACCTGCATATAGAGTATTTGGTTTAATATACATT 192362 31 100.0 36 ............................... AACAGTAGACGCCCGCTATCGCACTCGTAAGCGCGG 192295 31 100.0 36 ............................... ATAATAACGGAATTTGTTTAGATGGAAAAGTATTTT 192228 31 100.0 37 ............................... GTGTAGAAAAACTAAAAAGAGATAAAAATACGAATAA 192160 31 100.0 36 ............................... TCTTCCTTCTCTGTCCATACTGGCGGAGTGCCTTCA 192093 31 100.0 37 ............................... TCAAGCGTTAATCAAAAAATAGACGAATTTAATATGA 192025 31 100.0 36 ............................... GGTTTTATGAAGTTAGACCAAAACGGGAACTATATA 191958 31 100.0 37 ............................... ATATACAAGAATCATCAGATTTATTTTTATCAGCAAA 191890 31 100.0 36 ............................... AAAGAGGAATGCAAATAACTAGCGACCAAATAATCG 191823 31 100.0 37 ............................... GTCTATGAAGAATATACACGAAAACTAGATAAAGTAT 191755 31 100.0 37 ............................... CTTGTTGTCCATGTAATTCTATGATATTTGCAAATCC 191687 31 100.0 36 ............................... ATAGAAATAACTTCTTGGTATACTTATAGTTTCGAT 191620 31 100.0 36 ............................... TCTTCTTTAGATTTCTTATTATCCCAATCCGACCCT 191553 31 100.0 37 ............................... ATTCTATAGTAGACATAGAATAAAAGAGAAAATTGAA 191485 31 100.0 36 ............................... ATTAGATAGTAGAGCATTAACGGTTTGGGCGTTAGG 191418 31 100.0 36 ............................... AGCTTTTCAAACTATAAGGTAAAATTTTGGGACTTT 191351 31 100.0 37 ............................... TCACGTCGCACACGCGCACAAAAACGCGCACGCGTGC 191283 31 100.0 36 ............................... GGAAGCTGGAAAGGAGAAGAACTCCTACGAGTAAAT 191216 31 100.0 36 ............................... TGGGTATAAAGTGATTTATCAATATCCGAAGCAGAT 191149 31 100.0 36 ............................... GGTTTGCTTTCTCATTCATTTTTCTCGCATAGTCTA 191082 31 100.0 37 ............................... CAAAAGCCTAATGGACAAGAAAAAGAATTAAAAAAAT 191014 31 100.0 36 ............................... GCGGTTTTTACTACCATTCCAGCATCTCCCATTTTT 190947 31 100.0 36 ............................... GTTCAATGTAGCGAATTATTGTGCGCTAGTGTAGAA 190880 31 100.0 36 ............................... ATGTTATTAATTGTTGTTATTTTTTTACTTCCTCTT 190813 31 100.0 36 ............................... ACCGATATACTACATGAATAAACTAGATTTTACAGA 190746 31 100.0 36 ............................... TCGCTTAAATCGTCATAGTTAAGTATAGACATCCGA 190679 31 100.0 36 ............................... GAGTTAAACTTAGTATCTTTAGCGTCATTTCTTCGT 190612 31 100.0 36 ............................... ATATATATCTGGATACACATTTCTTATACTTACCAC 190545 31 100.0 36 ............................... GTGTTTCCCTATACTTATATTATAATATATTAATCG 190478 31 100.0 36 ............................... ATTAGAAAAATTAAGTAAAAAAGAATTATCGAGAAT 190411 31 100.0 36 ............................... GTTTTTAGATAAAATTCTAATTTACAATTACTGGCT 190344 31 100.0 36 ............................... TTATAATTTATTTTTAAATTTTCCACAAGGTTTAAT 190277 31 100.0 37 ............................... GCGTCTCCCATCTTTTACTCCTTTTTATTTTTAGCGA 190209 31 100.0 36 ............................... TCGAATATGCGGAACTATTATATGCTCCAAATAAAA 190142 31 100.0 36 ............................... GGCAGTTGGAAAGGTGAAGACCTATTAAGAGTAAAC 190075 31 100.0 37 ............................... GGTCGCGTTTTCTCTATACTTGATGGTTTCCATTTTG 190007 31 100.0 36 ............................... CTAATTGTAGAGTAGAGCAACTACTCAATATTATCA 189940 31 100.0 37 ............................... GGTCGCGTTTTCTCTATACTTGATGGTTTCCATTTTG 189872 31 100.0 36 ............................... TTCATTGTTATACATCATATTCAAAAATCTTTCATC 189805 31 100.0 35 ............................... GCTATGGCACTCGTCAACGCTGTTATTATTTCTTG 189739 31 100.0 36 ............................... CCGTATTTGCAGACATTATATTATTTACTTCTTCTA 189672 31 100.0 35 ............................... TTATTTGAACACCTCTAGACATGAATCCCGTAGTA 189606 31 100.0 39 ............................... ATCCGTTAGAGGAGACAATATAGATTTTTTGAAAGAAAG 189536 31 100.0 37 ............................... CTTTTTCCAAATGCATCTAATTTTACTCCTGATACAT 189468 31 100.0 36 ............................... TTTCGTATATTAGGCTTACCTTTCTAGATTCTTTAT 189401 31 100.0 37 ............................... GGTCTCGTTTTATCTATACTTGATGGTTTCCATTTTG 189333 31 100.0 37 ............................... ACATACAGGATATAATCCGCCCATTTTAAGCGTAGTA 189265 31 100.0 36 ............................... TAAAAAATTTTTTAGTGTTCCTTGTGGAAAATGTCT 189198 31 100.0 36 ............................... CATAATTAAGTATAGACAATCTAACATACTCTTTTA 189131 31 100.0 36 ............................... CATAATTAAGTATAGACAATCTAACATACTCTTTTA 189064 31 100.0 36 ............................... AATAATTATAGTCTTTCAAAGCGTGATTGTCAATTA 188997 31 100.0 38 ............................... TTTATTCCATAATAATCTATCGTATCGACTTAATTTAT 188928 31 100.0 36 ............................... TTCCAAACCTCCTTTTTTTATCAATTATTCATAAGA 188861 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ======================================= ================== 61 31 100.0 36 ATAATAAATCTAACCATATTGGAATGTAAAT # Left flank : ATAGAAATAATAAATCTAACCATATTGGAATGTAAATAAATATAACGAAGCATACTTTAAAAATATAAATGTATAATAAATCTAACCATATTGGAATGTAAATTCAAAAGTCTTCGGGGGTATGCTACCTTGTATAATAATAATAAATCTAACCATATTGGAATGTAAATTTCGTTTTGAGCCTTGTTATATTTATTGTTTACAAGATAATAAATCTAACCATATTGGAATGTAAATAAAAAAGCAACTCAAAGCTTTTTTTGGTGTGTATTTATAATAAATCTAACCATATTGGAATGTAAATGGGAGCTGGGCGGGAGAGGACCTATTGCGAGTAAATATAATAAATCTAACCATATTGGAATGTAAATCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTCAAAGCTTTTTTTGGTGTGTATTT # Right flank : GGTCTTGTCTTTTCTATACTTGATGGTTTCCATTTAATAATAAATCTAATCATAAAAAAGGATGGGAGCAATTTTTAAAAACGGCTTAGGCTATAGATAAGGATTTTGGAAAAGGTAATAGAAATTTAGATAGAGATATTACAAAAGATAAGGGCAGTTTATTTTACAGCAATATTGAACCAAGCGAAAAAGAGAAAAAATATAAAGCTATTTTGATCGAATTTTTAAAAGAGCAAAGAACTAATATAGAAATTAAAGATTTCGGTTTGAATAACGGTTTTTTGACAAAACATACAAATAAAATATTTAAAGAAATACAAAATAATTTAGATTGCAAATATTATAATGATGCCCAAAAAGGCTTTCATTTAGACGATAAAAAAATAAATGTTAAAATAAGGTATAAAAATAAAAATTAGCAAAATAGAATGGACTGAAGCAAACTGGAATCCAACTATAGGATGCGATAAAGTAAGTAGCGGTTGTAAAAATTGCTATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAATAAATCTAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 199977-193096 **** Predicted by CRISPRDetect 2.4 *** >NZ_SAYE01000014.1 Brachyspira aalborgi strain PC3939II PC3939II_contig14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 199976 31 100.0 36 ............................... CAAGATACGGAAGGCTGTTTATTGTTAGGCTTGAAA 199909 31 100.0 35 ............................... TCATTATGGTCGGGTCTTAAGGCTATTGAGTTAAA 199843 31 100.0 37 ............................... CTTGGAAATAATAAAGGGCGACTTTGGAAAGATTTAG 199775 31 100.0 37 ............................... GTGCAAATACAGGCTTTATGTTTCTGTGAAATCATAG 199707 31 100.0 36 ............................... ACTTGACTATTTATAAAAAAGTAAAAGAACACGAAC 199640 31 100.0 36 ............................... ATATATGCGGAAAGAAAGATTTAATATTTAAGTTTT 199573 31 100.0 36 ............................... TAATACTCATCGCATTTATAAAATGGTTTTGTATGG 199506 31 100.0 36 ............................... AGCGTATTTTTTGAAATGCTTAACGATGACGAACAT 199439 31 100.0 36 ............................... CTTCTTTAATTAAATTACACATGCGATATTTATAAA 199372 31 100.0 37 ............................... AATTTTAACATTTCGTTTACTCTTGCCGATACTGTCG 199304 31 100.0 36 ............................... CCGATGCCGCATACGGTATTACATTAAAATAGCTCC 199237 31 100.0 36 ............................... TCTTCATATATTTTATGTAAGCATTTAAGCTCCCGT 199170 31 100.0 36 ............................... ACAATATAATACTTTTTATCGCCATTTGCTCCTTGA 199103 31 100.0 37 ............................... TCTTGACATACTATAGCTATTGTCGACAGACAATTAA 199035 31 100.0 36 ............................... ATACATATCGCCTACCCCGTCCCTCTCATTCGTATT 198968 31 100.0 37 ............................... CCTAATCAAGAGGAAAAGAAATACGCTTGGTATTTTG 198900 31 100.0 36 ............................... GGTAGTTGGAAAGGCGAAGAATTGTTAAGAGTCAAT 198833 31 100.0 36 ............................... CAAAGTCCCAGAATTTTACTTTAAAATTACTAAAAC 198766 31 100.0 36 ............................... TTGGCATACTTGTTAAAATCCTTTATATTCGAATCT 198699 31 100.0 36 ............................... TTACCTAAATGGAAACCTTCAGACATAAAATTTACT 198632 31 100.0 36 ............................... AAATCAATTTAATTATCAAAAAGAATTAAATGATCT 198565 31 100.0 36 ............................... TCCGAACGGAATCGGATATTGAAGAACCTCGCTCGA 198498 31 100.0 37 ............................... TTTAAAAGCTGAATACGATGAAAACGGATTAACGAAA 198430 31 100.0 36 ............................... TCAATTAAAGGTAAATCAGAAGTATTGTCGACAGAA 198363 31 100.0 36 ............................... GGAGATGTCATTAACGTATCAAATGAATGTATAATA 198296 31 100.0 36 ............................... ATGTGATTTAATTCTATAAACGGAAAATCAAACATA 198229 31 100.0 36 ............................... TTTCGTCCCACTTTTCATTATACATTAAATTAAATA 198162 31 100.0 36 ............................... AAATGAGCATATAATTGTTTTATCTCTTCGTCTTTT 198095 31 100.0 37 ............................... TCCACTACTACTTTATCGTCTGATTGGTCATTTACGA 198027 31 100.0 36 ............................... ACGGATATAAGTAAAACAAGACCAGGAACATTATGG 197960 31 100.0 36 ............................... GGATGCAACTCCGTAGTTAAATTATAATCCTTTGGC 197893 31 100.0 37 ............................... GAAGAATTAATAGAGAGAGGAAAATTAACTGCTCAAA 197825 31 100.0 37 ............................... AAATATAGAGTATTAAGCGATTTAGAGCGTCAATTTA 197757 31 100.0 36 ............................... TTTGTAAAATGGAGTAGAGGTTTAGGGAGTGATTGG 197690 31 100.0 37 ............................... AAATATATCCATATGCTTGTCTGAAATAATCGATTTG 197622 31 100.0 35 ............................... CCATAAACATGGTCTATTAATCCTGGTTGATTAAA 197556 31 100.0 36 ............................... TTTTCTTCACCTCCTTAAAATTAAAATAAGTATCGC 197489 31 100.0 36 ............................... AAAAGCAAAAGAGGGTACGAGAGGAAAAGCGATGAA 197422 31 100.0 36 ............................... GTGCGATTGCTGGTATATATTGTTTAGTGAAGACAA 197355 31 100.0 36 ............................... TTTGTAAAATGGAGCAGAGGGCTAGGATTAGGATGG 197288 31 100.0 37 ............................... AGAAACTACTTTGACCTAAGTCAAGAACATATATTTA 197220 31 100.0 37 ............................... ATTACAGGGCTAGCTAGCGTAAATTTTGATAATGTAG 197152 31 100.0 36 ............................... GCTGTATATCTTATTGCTCTGTTATCTTTAATTCTT 197085 31 100.0 36 ............................... TATTGTTTTTTTATTTTCTTTACGATGTTTATAATA 197018 31 100.0 38 ............................... ACATTAGATAAATCGAAACTATTATTATTAAGATATTC 196949 31 100.0 36 ............................... TTAAGCGCGGAATACGATAAAAATGGCATGACGATG 196882 31 100.0 36 ............................... GGCGATGTTATAAACGTAAAAAATCAATGCGTAATA 196815 31 100.0 36 ............................... ATCATAAATAATCAAGAAGACGATAAAGTCGTAGTA 196748 31 100.0 36 ............................... TGTGTTATTCCTAGCATGCTAGGTATTCTTTTCTTG 196681 31 100.0 36 ............................... GCTGCTTCTAAGTCTTTAATTTTTCTTTGAGTAGCA 196614 31 100.0 36 ............................... ACGACAAATAATCAAGAAACTGATAACGTGGTTGTA 196547 31 100.0 36 ............................... TACTCTCCAGCTAAAAGATATTTAAATTTATATCCA 196480 31 100.0 35 ............................... TTTGGTAATGGTTGTTCCCATGGGACTTCGGACGT 196414 31 100.0 37 ............................... AAACTCGTCATGCCTCCTGATGCGCTTTGATTTCCTA 196346 31 100.0 36 ............................... ATTCTATAACAGACATAAAATTAAAGAAAAAATACA 196279 31 100.0 36 ............................... ATCCTTACCTAATCCTACGCTCCATTTCACGAACGG 196212 31 100.0 36 ............................... TCGGTATAAGTATACCTAGAAACTATTTCGACTTAA 196145 31 100.0 37 ............................... ATAGCTATAGTATGTCAAGAGGGTTATAGCTATTGGC 196077 31 100.0 36 ............................... GGCGATGTCATACATGTAAGTAATGAATGTATAATA 196010 31 100.0 36 ............................... TCTGTCTCTCCTTATGATTTTTTTATTTTCTTTACG 195943 31 100.0 37 ............................... TGACCTGTAAGAGGCACAGACGGAGAAGTTCCTTTTT 195875 31 100.0 36 ............................... GTTTGTATCCTGCTATTCTTTCATTATATTTACTTG 195808 31 100.0 36 ............................... GCTTCCGCCGTAAAGACATGTTCTTGTCCTAGATAG 195741 31 100.0 36 ............................... TCTCTCTCGTTGGTGTTATTAGCTGTCTGAAGTATT 195674 31 100.0 36 ............................... GTTGTATAGGTTGTCTTTTGTTTTAAGATTTCCATC 195607 31 100.0 36 ............................... TATTTTCTTTTTAGGTAATAATACCTTATTATAACA 195540 31 100.0 36 ............................... ATGTCTGACGCTTTAAAATTAGTTTGTAGAGTTCCT 195473 31 100.0 36 ............................... TTTCTACATAATTTTCTATTAGAGTCATTGAAATAT 195406 31 100.0 36 ............................... TCATGCCCATACTTATATTATTCGACATATTTTTAA 195339 31 100.0 36 ............................... ATACGACTATTTCCATTTGGCTTCGTCCGAACGGTA 195272 31 100.0 36 ............................... AAGTCTCCAGAATATGAAATCAAAGAAAGAGAAAAC 195205 31 100.0 36 ............................... TTCATTTCCATCCATCGCAAATCCCTTATGCCCATA 195138 31 100.0 36 ............................... TATATTTTTTTCATTTTCTTTACGATGTTTATAATA 195071 31 100.0 37 ............................... GTTATATAGATTGTCTTTTGTTTTAAGATTTCCATCA 195003 31 100.0 36 ............................... CCCCATTATTTATTTCCTCCTTGATTTCGCTTTCTT 194936 31 100.0 36 ............................... TTACATGCAGAATATGATAAAAACGGGATGACGATG 194869 31 100.0 36 ............................... ATTACGGGGGCCGAATTAGTTTGTATATCATCTAAA 194802 31 100.0 36 ............................... TCATGAGACGCTCAAGAAATTTCTGAATTTGAAACA 194735 31 100.0 36 ............................... AAGAGTTCTGTGTATACTTAAAATTAATGTATATAA 194668 31 100.0 36 ............................... TAATCTGACGATTTAAATCTTGTTGATATGCGAATT 194601 31 100.0 36 ............................... AATATTTGGCTATTTAATAACTGGAAATTAGGAGAG 194534 31 100.0 36 ............................... TGACATACTATGTCTATCGGGCAAATGAAAATTTTA 194467 31 100.0 36 ............................... GGTAGCTGGCAAGGGGAAGATTTATTACGAGTAAAT 194400 31 100.0 36 ............................... CTTTTTCCAGAGTATAATGTTTTTTGAATTCTAGTC 194333 31 100.0 36 ............................... ACTTTAAAAGAAAAATTAAAGAAGATATAATGAATT 194266 31 100.0 37 ............................... TGAATATAAATTCTATCATTTTAGTTCTTTTATTATA 194198 31 100.0 37 ............................... GAATTTGACCTTGTAGTTGGAAAAACTAGGATTTATG 194130 31 100.0 36 ............................... TACATATCGCTTACCCCATCTCGCTCATTAGTATTA 194063 31 100.0 37 ............................... ACGCCTATACCGTGTCCATATAAATCACCTACGCCGT 193995 31 100.0 35 ............................... CTCGCATCTTTTAATCTTTCAATTTTAACTTGTCC 193929 31 100.0 36 ............................... GCTATTATTGAAGTAATCATTGTTATTACTTCAGGT 193862 31 100.0 36 ............................... GTATGTTGTCATACCTCCCGAAGCGGCTTCTTGATT 193795 31 100.0 36 ............................... TTCGGAAGAAGCCAGATGGAAGTTATAGTATCAGAA 193728 31 100.0 36 ............................... ACTCCTCAGAAGCCAGGAGGCGCTGAAAAAGAACTA 193661 31 100.0 36 ............................... CTTCAATCTGTCCTTCTTTTTTCTGATTTAAAGAAG 193594 31 100.0 36 ............................... TTTGTGAAGTGGAGCATAGGTTTAGGCAAAGATTGG 193527 31 100.0 36 ............................... AGAAGTGATTACCGCGCTTACGAGTGCGATAGCGGG 193460 31 100.0 36 ............................... AAGATAAAATAGACCAATTCTACAGTAGACATAGAA 193393 31 100.0 35 ............................... AAATATAACGAAGCATACTTTAAAAATATAAATGT 193327 31 100.0 36 ............................... TCAAAAGTCTTCGGGGGTATGCTACCTTGTATAATA 193260 31 100.0 36 ............................... TTCGTTTTGAGCCTTGTTATATTTATTGTTTACAAG 193193 31 100.0 36 ............................... AAAAAAGCAACTCAAAGCTTTTTTTGGTGTGTATTT 193126 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ====================================== ================== 103 31 100.0 36 ATAATAAATCTAACCATATTGGAATGTAAAT # Left flank : ATTTACTCGGAGAAAAAGAATATTCCCCGTTTAAAATATGGTGGTAGAAATGTATATAATTTTAATATATGATATTCAGGTAAACGATGAAGATAATCCTTATGTATTGAAAAAAGTTTTTAATATTTGCAAAAGGTATCTTAATCATATACAAAAATCGGTATTTGAAGGCGAACTTTCAGAACCTAAATACCTTAAATTAAAAGAAGAGCTCTTTGACATATTAAGAGAACATAAAGACTCATGCATAATATTTAAAAGCAGAAACGAAAAGTGGCTTGAAAAAGAGTTTTTAGTGAAAGAAGATATTGACAAAACTTCAAATTTTATATAAAATACAAGTATGTCGATGTATAATCTATAATAATTTACGGATTATCGACAGACGATTTTTAAAATTAATGTCGTATTTTGTATTGTTATATTATTTTATATCAATACTTGTATCAAATTAATATGTAGAAAATATTAGTTTGGCATATTTCAGAGAGAAAAAACGG # Right flank : GGGAGCTGGGCGGGAGAGGACCTATTGCGAGTAAATATAATAAATCTAACCATATTGGAATGTAAATCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTCAAAGCTTTTTTTGGTGTGTATTTATAATAAATCTAACCATATTGGAATGTAAATGGGAGCTGGGCGGGAGAGGACCTATTGCGAGTAAATATAATAAATCTAACCATATTGGAATGTAAATTTTAGGTCTAACTTCATATGTCCTGGATTCCATTTAATAATAAATCTAACCATATTGGAATGTAAATCGAATATTTTGCTATCTTCAGTCAGTGCTGACGTTAATAATAAATCTAACCATATTGGAATGTAAATCATCGTCGTTTACATCTATAAATACGAATTCTATTAATAATAAATCTAACCATATTGGAATGTAAATTTTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAATAAATCTAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //