Array 1 574894-575854 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026649.1 Weizmannia coagulans strain R11 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 574894 32 100.0 35 ................................ CTTCATGTATCCCGGCACGATATAATAATCATCGT 574961 32 100.0 36 ................................ TCGATAGCCTTTAACGTGATAAAATCGTTTTTCAGC 575029 32 100.0 33 ................................ ACAGAACTTTATTGTGAGGTGAAGGCCGGTGGC 575094 32 100.0 34 ................................ CAATAAGTTGATGATCGGGATCACAACGGCCGGC 575160 31 96.9 34 ........-....................... ATCACAAATGCTTCTCTCTCGCGCGGAGACAGCC 575225 32 100.0 35 ................................ CGGGGTTGGGACAGGCGGCCGGTCCGTTACACTTA 575292 32 100.0 34 ................................ GCAGCCATTAGGCGCTGTGCTTTCACGGTATTTG 575358 32 100.0 34 ................................ ATAAAAGTTACGTATGGTATCGTCAATCTACATC 575424 32 100.0 34 ................................ CCGTTAACGTTGACGACTTTGACGCCTTTTATCA 575490 32 100.0 35 ................................ CAGCCGTTCGTATATTTTCCGGCAGACCACGCCAT 575557 32 100.0 34 ................................ GAAAGTTGTCGGGTCTGCAAAGCTGATGCCGATA 575623 32 100.0 35 ................................ AGTATCTCCAATATAACATGAAACGAAGTCAGAAA 575690 32 100.0 35 ................................ CCGATTTTAGGCCCCGCTCCGACAACGTATAGTGC 575757 32 93.8 34 .....................G.G........ CAAACGGGTTATCGGTAAAATGGCTGACGGCGGC 575823 32 84.4 0 ............A.......AGA........A | ========== ====== ====== ====== ================================ ==================================== ================== 15 32 98.3 34 GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Left flank : CATTGATCAACATAAGGTTGCAAGATCATATAAAGATTATGCCGTCGTTTTTGATGAAAAGATGCCAGAGGGAGTAACACTGCACAAAATTGCGAATTCCTTTAAAGATGCTAAAGTTGTCAACTGAGTTGCTGTTTTTGGATACGGATCCTTTCTTCAGTGCCGTTCTTTATTGAAGGGGAAGCTTAACAGAGGCTTATAACCTGTAAAACATAAAAACCATTAGAAATAGTTTAATGTTAATTGCGTTACGATCGTGGACTATGATGTTGCTGCGTTTTAACACTCTGTTTTATGCAAAATAGCAGCCTTGTAATGAGAATTGCTTTTTGGCGCAACTGTGCGAATGGAGAGTATACATGAATTTCCCGTGGGATTCGCACCAGGAATCCCCTTGCTTTTTTCCAAATTACGGAATTTTTGCATGGATAAATTTAGAATAATATGAAAAAAACACAGTTATTCGTCAAAAAACATCAAATTTCTACAAGGTTATAGCT # Right flank : AAAATAAACGCAGCAGGAAACAATGGAACAGAGCCGAACAGTCACTTTACGCATGAAATAATTGTGAAAAAGGAGAGATCCGGGGGCGTAATCAGTGATATTCTATCCAAAGAATAAATTCGTTCGTTACGCGTGTCCCGGCGTTAAGGCGTCAAGCGTGAACCATGATTCGTTCGCAACCAGTTGTAAATAGTGAGTGTCAAGCAATTTGATATGCTCAAATCTAAGCAGCAAGCCCCCAGATCTCCTTTTCCTTGCCGGCATGAGATCCGGCGGCAAAAGGCGGAATCCAAGCTCCGCCCCTTGCCGCCGGGTCTCATGCCGGGTGTTTACTGGTACTCCTCTACAAAGTCCAGGTCAACCGCTGCGTTAAAATTGGCTTTATCAATCAGTATCGACAAACGGTTGGCTTCTTTTTCGGTTTTTTCAGCCTGCTTTTTAACCGCAGGGGGGTCAAACAGCGCTTTCTTGTAGACAACATTTGCGTCAAAAGCGCCTCT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACTCCTCGTGAGTGTGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 2 2908950-2905419 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP026649.1 Weizmannia coagulans strain R11 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2908949 32 100.0 34 ................................ ATGTAGCGACCCTAAAGGTTACGGCGAATACCAA 2908883 32 100.0 34 ................................ CAGAAGAAGCTTTAAATGAAATTACAGGTGCTGT 2908817 32 100.0 34 ................................ TGTTCGTGATGAAAACGAATCACTAAAAGCACAA 2908751 32 100.0 34 ................................ TGGAGAAGCTACGAGGACAACTTCTTCTGTAGAA 2908685 32 100.0 35 ................................ ACCTGGACTAACGCCAATTGCATCGGCAAGTTGAC 2908618 32 100.0 33 ................................ CGGCTTAAGTCTGGATACTGCAGCTAAATCAAC 2908553 32 100.0 33 ................................ CGTGATAGTATCAATGATCTTGGTAACGATTTA 2908488 32 100.0 35 ................................ CGCCGCTGTTGATGCCGTGCTAAGCGCGGACTCTA 2908421 32 100.0 34 ................................ ATGGGAAGCGGAACAACCGCAAAAATGGCGTTGT 2908355 32 100.0 34 ................................ GTCGCGAATAAGGTGACGGCTGGATACGGACTAA 2908289 32 100.0 34 ................................ AATTAGTAGATGTGACGGATAATAGCAAACAATA 2908223 32 100.0 35 ................................ AAATCTGCAAAAGAGCAGCAGGAAATCTTGGGTAA 2908156 32 100.0 34 ................................ TATTTTGATTTAATATATACACCATTTCTAAGAA 2908090 32 100.0 34 ................................ AAGCAACACCGCATATGTCTTACCGTTCGATCGC 2908024 32 100.0 35 ................................ CTCAAGTGATATAATCGGGCGATCTGGCATTTTAC 2907957 32 100.0 33 ................................ CCAGATCATCCAGATCAGCCACGGTCAATTCGC 2907892 32 100.0 34 ................................ ATCCAGGGTGGACGTCACTTCGTCTTTACCCTGG 2907826 32 100.0 34 ................................ GTTTGTATATCGAACTGTTTATCGGACGGCTTGG 2907760 32 100.0 34 ................................ GCGTCATCATCTATCAAATACTCCCGGCCGCCGT 2907694 32 100.0 34 ................................ TGCGCTAAATTGATTTGTAAGCTGATCGAGCCAA 2907628 32 100.0 33 ................................ TGAAATCTCCGGTCTGCTCCATGACCGGCTGAA 2907563 32 100.0 34 ................................ GATTCGCCCAGCTCATCCACAAAATCAATCACTT 2907497 32 100.0 34 ................................ CGTAAAATATCGTTTTAGCTCGCCAGGCCGCTCC 2907431 32 100.0 33 ................................ CCAGGTCATGGGAACATTTTTAATGGATTTGAC 2907366 32 100.0 33 ................................ ACCGCGCTTGGTTGCCGTCCATAATTCGTTGAT 2907301 32 100.0 33 ................................ GAACATTTTAAGAAAGTAATGCACGAATGCGAG 2907236 32 100.0 32 ................................ CAGTAGTTGAAGAACAAACACAAAATATCCCC 2907172 32 100.0 34 ................................ GCATCATCGTCCACGAGATACTCACGGCCGCCGT 2907106 32 100.0 36 ................................ TCGAGCAACCCTATCCGGAACTTTTAACCACATGGT 2907038 32 100.0 34 ................................ AGAGGAGATAAATCACCTAACTGGGATAATGAAA 2906972 32 100.0 35 ................................ AACGACTATCGCATAGGCGGTGAAATTCCGCAAAA 2906905 32 100.0 35 ................................ CATGTCCCCAGCTGCTGCCAGGTATTCGTCCTTGC 2906838 32 100.0 34 ................................ CAGCTAGCAAAGAGAATATTCTGGCGGCAAAGCG 2906772 32 100.0 34 ................................ GACAAGGATGTCACGCTTGTTGTAGTTCAGCGCC 2906706 32 100.0 33 ................................ AATGGTGATAATTATCACAATATCATGTATGAC 2906641 32 100.0 34 ................................ GAGCGTATCGGCCCATATTTTGCCCTGGTCGTCT 2906575 32 100.0 35 ................................ GCCGTAGCCCTTCGGGTCGCTACATGAAAAGGTAA 2906508 32 100.0 34 ................................ GATGTCGTACTTAGCGATATATGCAGCAACTGCA 2906442 32 100.0 34 ................................ TGCATCATAGCTGGATACCACAAGCTCGCTATGG 2906376 32 100.0 33 ................................ AAAAAATCCGGGTGATTTGCCTGAACAGCTTTG 2906311 32 100.0 34 ................................ TTATTTATCGTAGCAACATCAACAAATGACAGCT 2906245 32 100.0 36 ................................ CTGATTTTTGCCCGCATTTCTGCGATTGTCTGTCCA 2906177 32 100.0 34 ................................ AGCAGTGTATTCGACAGCGTGGAAATGCCATCGT 2906111 32 100.0 33 ................................ GCGTGAAACAATTGAAGGACGCGACGGTTTTAT 2906046 32 100.0 35 ................................ TGAAATCTCCGGTCTGCTCCATGACCGGCTGAAAA 2905979 32 100.0 34 ................................ CGTGAAGGTTTGGTTTTTGTTGGCCGGAAAAACG 2905913 32 100.0 35 ................................ CATATCCTGCTGGTATTTCAAACGCAAGGCCTGTT 2905846 32 100.0 35 ................................ CAGCGCCAAATCAACGATATTTCCGTTAATATCCC 2905779 32 100.0 34 ................................ CCGGCAGGCCCCTGTTGTCCTTGTGGTCCCTGAG 2905713 32 100.0 34 ................................ CCCCTTTTTGACTCGCCAACGAAAGCTAACACGG 2905647 32 100.0 33 ................................ GATGCCGTCCGGCACATAGGCGCGTTTTATGCC 2905582 32 100.0 34 ................................ ATTGGATTCCGGTTAAACTTGGACCGAAAAAACA 2905516 32 100.0 34 ................................ AAGTTACCGAATTTGCACTGAACGCGGACGAGTC 2905450 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 54 32 100.0 34 GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Left flank : AGATGAGTATCCTCCTTTTCTGTGGAAGTAGGTGGAAAATTTTGCTTGTTGTCATTACTTATGATGTGAGTACTTTGACCGGAGCAGGGCAGAAGAGGTTAAGAAAAGTAGCGAAAGTTTGTCAAAACTATGGCCAGCGTGTCCAGAATTCCGTTTTTGAGTGTTTCGTTGATGCAACACAATTTGCCTCTTTGAAGATTGAACTGTCTAATATTATTGACCCAGATGAAGATAGCCTGAGATTTTATCAGTTGGGAAACAACTATAAAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAAGACCCCTTGATCTTTTAGTGCGAAGGTGTAGTGCACACGATTTTCCCGTGTGTTCGCACCAATATGCTAACCAATATTTTACATATATTGGTTAAATATGGAAAAATAGTCCTTTGTTTATCAGAGGAAATGGCGAAATTTGGTTGTTTTAAAAACGTACATTCGCCTTTTTAACCAAATTCCGCT # Right flank : CGTTTGCTGTATTTGCGATCCCTGGGATCATCAAGTCGCTCCCTAATGAAGACTTGATGAGCAAACCAGACAAAGCCTTGTATCTGGTTCGCTCAGCCGCAAATCTGGTTGATGCCGCCTTCTTTGTTCCTTCCATCAACCTTAGACCCGAAAAGTGGCGCTGAACGCGCAGATACCAGTGACAAACCCTTTTTGTAAAGTAACTCTTGTTTTTATAGTTCCTGGAACCGGGACCAGGGCTTTCCTTATTCAGCAGCCCCCGATTATGTATTTCTGTCATCCTCATTGTCCAGTTCCCTGATAAAATTCCAAGTCTGATAAATCCGGTTTGCCATTTTCTCAGGATCTTTCAGCATCATTTGGTATAAATCCGGCTCATGGCTCAACGTTTCAAGCAGTTTCTTTTCCGGATTACTGACCGCTTCATTTGTCTTCAGGCCGGCATGGTTGGTAAGGCCCAAAAGATAATCAATTGAAACTTTTAACACTTGCGAAATACG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACATGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //