Array 1 402651-402880 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRH010000001.1 Anaerostipes caccae strain DFI.1.4 FDHGLMNP_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 402651 30 100.0 37 .............................. CACATGAATTTCGGTCGTGCACATAAATTACGGCACC 402718 30 96.7 37 .....................C........ GAAGAAACTGTTGTTCCGGTAGAAGAATTTAATCTTA 402785 30 100.0 36 .............................. TGATGAATTACTACACCTCCAATAATACTTGATTCC 402851 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 99.2 37 GATAAACAAAAACAAGAGTTGTATTGAAAT # Left flank : AAAAGCCAGGCGGTGGTTTTGATTGGGGTGACTTATCAGCAAAGAGGACTGAATGAGTGCTGTGGTTGGTGTAATCAGACAAACTGCCAGGGCTGCAGGGAGAACCAGAGCGTCTGTGTATTTGATCCGGTGGATCTGGGAATCGCATTGGGATCGGCAGTCAGTGTGGCATCCTTAAACCACGTGGACAATCGGATCATGTTTTCTGTTGGAAAAGGAGCACTATCCTTGGGGATGCTGGGACCGGAAGTGAAGATAATCCTTGGAATTCCGTTGGCTGCTGCGGGAAAAGCGCCATATTTTGACCGTAAATAACGGTGTAGTTTTCCCAACCGGCTAAATTTAAAAAGTGGTCCAAAACGTTGATTTTACAGGGGCTGCAGAGGATTTTTAGGATTAGTTTTGAAAATGGACGGCCGGTTGGGAAAAAAGCTGGAAAACGTTGAATATATCTAGGTTTAGAGATATAATGGAAACTGAAGAATGGCTTAAAAACGTTG # Right flank : TACACTTACCTCCTCTTTTGTCAAAGGACGTCCACAGATAAATAAAAATAAAATGAATAATAGATTGCTTATCTTAATTTGAATTGTTTGAAAGTACTATGAAATGTTGTATTATTTTGAAAAATATAGTAAAATAGAACAATAGAGTGGTTTGTGTATAAAAGCTACTAATGAATCATTCCCTCCAGGGCAGTCGTTACGATAGGTACTATCAGCATGTATACGATACGAGGGTGCATACAAAAGAAAGGGGTGGGGCAGTGGATTTACAAGTTTTTGAAATCCGGCTAAAAGTATATCTGTTAGAAGATATCCCTGTAGAAGCAGTTCAAAAGAAGACAGCCGCACTGATTGACATTTGTCTGAGCAGAGACGAAGCACTTCTGAAATTTCATGAGACGAATCAATTTAAGAATTATTCTTTCGGAAATCCATATCCATTGGAAAAGGACAAAATTTATAAAAAGGATAAGGTGTATGTCATAACAATCCGCACCATT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAAAAACAAGAGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA // Array 1 93924-95214 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRH010000002.1 Anaerostipes caccae strain DFI.1.4 FDHGLMNP_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 93924 32 100.0 34 ................................ TTACCGACTGCTTACTGGGTAAACGGAGATACAG 93990 32 100.0 35 ................................ CTCTTGGAATGGCTTTAGGAATTGAGAAAAACGCC 94057 32 100.0 34 ................................ GTGTAAAATTTATGTTCGCACTCCAGACATTTTC 94123 32 100.0 34 ................................ TTTAAGACGGTGTGACATATCCTCAAAATACAGT 94189 32 100.0 35 ................................ TGTTTATACCAGGAGTAAATATCATTACTTTGCTT 94256 32 100.0 35 ................................ AGGTCGGGTTTGGTGATGTCGCAAAAACATACACC 94323 32 100.0 34 ................................ ATAAGAGAAGACTTAGGATTATCTCAAGCAGGCC 94389 32 100.0 34 ................................ GTAAAATCTCCTGTCCAGGCTAAAATGTCTTGGT 94455 32 100.0 35 ................................ GCCACTGTTGCGAAAGAGGCAGACGTAGACGAATA 94522 32 100.0 34 ................................ CTGTCAATACAAAGGATTTAATACAGATCCATGG 94588 32 100.0 34 ................................ GTGCACATCGTTAGCAATACTTTGTCTTTACTAC 94654 32 100.0 34 ................................ TCCGCTATAGAAAAGGAGGCAAGTATGCAGAAAG 94720 32 100.0 34 ................................ AGATCTGGCGATAAACCGGACGGACGACATAGGC 94786 32 100.0 34 ................................ ATAGATATTTTGTTTAAACCGGTCTGTTGTGATA 94852 32 100.0 33 ................................ CTTAGAGATATCTTTCATTGTTGCTCCCCGCAC 94917 32 100.0 35 ................................ TACATATTTAATAATATTACCAGGCTGCATATCTA 94984 32 100.0 34 ................................ ACCGTGGGAAAAGAAAACACGGTCAAGGGCTTAG 95050 32 100.0 34 ................................ AAAAAAACAGGATGCCTATAAAAATGCTGTAGAG 95116 32 100.0 35 ................................ ATTAATATCACGACTGAAGGATTTGTCAGAGAAGG 95183 32 78.1 0 ......T...A..A.....AA..C....G... | ========== ====== ====== ====== ================================ =================================== ================== 20 32 98.9 34 GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Left flank : TGCATATCCGCCTTTTTTATGGAAGTGAGGTAGCAAACGTGTTAGTGTTAATTACTTATGATGTAAATACAGAAACATCTGCGGGAAAGACAAGGCTTCGGAAGGTCGCTAAGCAGTGTGTGAATTATGGGAGACGTGTACAGAATTCGGTATTTGAATGTATACTTGACAATGCCCAAAGCGTGCTGCTAAAGTCTATGCTTACAGATATCATAGATGAGGAAGTAGATAGTTTACGGTTTTACTACTTGGGAAATAATTACAAAACGAAAGTAGAACATGTAGGTGTAAACCGTGGAATTGCAGCGGATGAGACATTAATCTTATAGTGCGAATTGGAAGTGAACACGAAAACCCAGGGAGGCTCGCACCAAAAAAGTTGCACAAAAACAGTATAAATGAAAAGAAAAGTTATCGGTTTATGAATTGAAGATTAGTTGTGGTTAGCGAAATGATACAAATTAAATATATATGTGGAGGTATTTTTGTTGAATTTTGCT # Right flank : TTCATACCAGAATGAATAAGTGATGAAGAATAAGACTTTTCATTTTGATATAAAAGGAAGCATATTCAATGGGGATTAAAGGAATCATGCAGGCCAGACATATTCTATTACTTGCGTCAGGAAAACAGAAAGCCCAGGCTCTGTATGAGGCTGTTTACGGTGATATCACACCGGAAGTCCCGGCATCTATCCTTAAATTACATCCCCATGCTGCCGTATTCGCGGAGGAGGCTCTCTCTGTGATCAAAGAAAAATCTTGAAAATAAAATAGTTTGTTGTTCCTTTGTTGACATTCTTCATGTAAGATAAACCAGAGGTGATAACAATGAACTATAAGATTTTACTCGTCGACGATGACAAAGATTTATTACAGATGCTCCGTAGCTATTTTGAACTGAAGGGCTATCTCATAAAAACAGCGGTCAACGGACTGGAAGCTATGGAGCGGATAAAGGATGCCCCGGATATTATCCTGCTGGATGTCAACATGCCGGGGCTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCCTCGTGGGAACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.40,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 677665-677890 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRH010000002.1 Anaerostipes caccae strain DFI.1.4 FDHGLMNP_2, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 677665 30 100.0 36 .............................. TCTGTAATTTCCCGGATCGTCACATTGTCAAAGACC 677731 30 100.0 34 .............................. TCAGTAGTCGCAGTAAATTTAGAAATCTGTATAC 677795 30 100.0 36 .............................. TTTGCAAGTCTTCTTGTGCCTTCATCCCGAGATAAT 677861 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GATAAATAAAAACAAGAGTTGTATATTTAC # Left flank : GGCTTTGGGCTGATTTATGTGATTCATCACATTGAAAAACAAAAGATTTATTATGAATTTGGAAAAGAACACTGCTTTTTTGTGGTTGTGACATAAGTGAGGAGGAAAAAGAAATGCTGCCGAATGATCCGGTGATACTGTTAAGCTACATCAATACACAGCTGAGGGACTATTATGACAGTTTCGAGGAACTTTGCAAGAGTCTGTGTGTAGACTCAGGAGAGATCAGTACAAAACTTTCGGGTATCGGTTATGAATATCATCCTGAGACAAATCAATTCAGATAGTGGAAAATAAGGGCTGCCGGATGGTCGGCTTATATTGTGTTTCCCAACCTCAAAAAGAGACGAAATGCCGGGAGACCGCTTAAAATGGCGGTTGGCAGCCGATTCGAAAGAAAATGCCGGAAGAACAGAAACGGTTGGGAAAAATTCAGAGAAACGTTGAATTTATCAGGGAAAATGACTATAATAAAAATAAGGAATGGCAGAAATACGTTG # Right flank : CAACAAATGTAAAATACGAAAAGGCATTGAGCTTCTTTAATTTCACAAGAAACTCAATGCCTAAATTTTTACTTTTTCATATCCTATTGATTCGATACATTTATAAAAACTGCTCAACAAACTCAACCGGAAGCATCGTTCGCTCCGCAGTTTCTTCTGCGGAGAGCCCCTGTGACAAGAAACGTTTTGCAACACTTTCCATGCTCTCTGCCACTTCTACGATATATTTGTCATAATCATAAAACCGCATAACACGCTGGCCCCATGGATATTCTTTGATTCCATGGAGAAATTCAATCCCTTCCAGAGCTTTCAGCTTATCTTCCCAGGCGTCCAAATCTTCCACTTCAAAATAAAGCTGAAAATTATCAGGTTTCTCCTGAGGCTCCAGTTTCACTCCGACCAATTCTTCGTAGTTAGACTGCAGAGACAGGCCATTTTGAAAAGAAACATGAACCCCCAGATCCATCTCTACCGTTTGTTCCATTACCTTCTCATAA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAATAAAAACAAGAGTTGTATATTTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 781571-781865 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCRH010000002.1 Anaerostipes caccae strain DFI.1.4 FDHGLMNP_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 781571 31 100.0 36 ............................... TTTTACCATGCACCTGCCTGAAATGCAAGGAGCCGA 781638 31 100.0 35 ............................... GCCGATAGCATGGATGGAGATGCCGGAGCCGTATA 781704 31 100.0 34 ............................... ATCTGATACTGTGTTACATTACTAACTTTGTTCC 781769 31 93.5 35 A................A............. TGGGTAGTGTGCTGGTCTATGGCAGCAAAGTTCTC 781835 31 74.2 0 A........GT.....AA.........T.TA | ========== ====== ====== ====== =============================== ==================================== ================== 5 31 93.5 35 GGATAAACATCAACAAGCGTTGTATTGAAAT # Left flank : TCTGCTGGTGAGGCCGTACAGGGAAAGCAAGAAGTTAAAGGTTGATTTGAAAGAGGTAACAGGAACAAGATAATATTGGAAATAGAGAGGTCTGCACCTGGTGTGCAGACCTGCATGATAAAGGAGGTTTCTATGGGAACAATAGCAGTAGGTTTGGCTGTCCTTGGTATTGTCAGTTTGATCGTCAGAAGCATGGTAAAGGATAAGAGACAGGGAAAGTCGATCCAGTGCGGGAATGACTGCAAACATTGCGGCGGGCACTGCGGTCATTGAGAAATGGAGAGTTGTCTCAGCTGACTACATTGAGGCTGGCTGATAATGATTGGATTTCCCAACCACAAATATTTAAATAGAATGGCAGAACCGCAGAAAATGGTGGTTTACAGGCGATTTGAAAGAAAAAACAGAAAATATGAAGGTGGTTGGGAAAAAACAAAGGAAACGTTGATTTTATCAGGGAAACTGGCTATAATAAAAAATAGAAATGGCTTAAAAACGAG # Right flank : AAAGATCTTCTTTCTATGTCCAGGAGACAGAAATTATAATTTCTGCCTTCTATTTTTTTGCCTTCTGTCTGCTGAACCACACCAGTCCACAAGCTGCCGTTTTTATGTTATGATAAAAGAGCAAAACACAAAGGAGGAGCTATGAGATTTGGTTACGATATCCCGGATTCTTTTTGGAGCCTGTTCCGTTCTGTAAACCGGGATCATTACATAGAAGCGCTGCTGAAAATCAGTGAAGAATATGAATATAACAACTACTTTCTGAGCCGGGAGGTCTGTATTCAGGTCCTGAGCGACTGGAATGCGGACAAGCGCATCTGGCTCCAGCGGGAAGAGTTTGAATCAGAACTGGATGTACTGGAGACTCCCCCAAACCGGATACTAAACTGGCTGATTAAGACCGGCTGGCTGAAAAAACTGGATGACTTTTCTACGCTGACATCCAACATTGTCATTCCCGATTACGCGGCCGTTTTTCTCGATGCTTTTGAACAGCTCGT # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:0, 3:3, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGATAAACATCAACAAGCGTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //