Array 1 114-1007 **** Predicted by CRISPRDetect 2.4 *** >NZ_OEST01000015.1 Bacteroides cutis strain Marseille-P4118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 114 45 89.4 30 T...-..G.A.-................................... TCCTTACGTCAAACTTCCCACTGTCTATAT AC,G [119,128] 192 47 100.0 30 ............................................... GATACAGCAAGGCTTTTATTCCCCGATGCC 269 47 100.0 30 ............................................... TGCTTTTGCTTTCGGATTGTCCGCCCAGAT 346 47 100.0 30 ............................................... ATATCTGACAGCGTAGCGGTTCTTCCGTTG 423 47 100.0 30 ............................................... CCCGCAACAAATCTTTCTCCACTACATTGA 500 47 100.0 30 ............................................... TCCACTGCCGCAAGCAAGGATATGAATGAC 577 47 100.0 30 ............................................... TTGGCAACAGGTGACCGAGGCGCTGCATTG 654 47 100.0 29 ............................................... GAAACGGTTATGCTAAAGAAGCATTAAAA 730 47 100.0 30 ............................................... GCTGAACCACTCGTTCATGTCGTTCACTGA 807 47 100.0 30 ............................................... TAAAGATAAAGTATTAGTTCTTAATAGAAT 884 47 100.0 30 ............................................... CGTCTTTGCCATCCACGCTTCAAAATTTTC 961 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 12 47 99.1 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAAC # Left flank : GATTTCTATCTCTTGCAATACTATTTGCAAAAGTATAAAATCAAATCCCGGAAAAATTTTATTCGCGTAATGCATTAATATAAACTAATTTAAATCATGTCTGAGAAAATTTCT # Right flank : CTGAATATTCATTACATTATAATATTCAACTAGTTACTACACCATTTAGAATTAAAAAAAGAAGTATGTTTCCCAGAAAAAATCCCGCCTAATAGCGGGATTTTCTTTTTAGAACAGCTCCAGTTGCTGTCCCGGAGTATTTACTTCCATAGTCTTCTTTCCATAAAAAAGTTCAATACTTCCGAATTGTTTATCCGTAATACACATAATTCCTACGTTTCCATGTTCAGGCAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACTACTCGCACAATGACGAACATATATAGAAAACTGAAACATCGTGAATCCATCTTTTTGCAGTTTTTTTTTAAAATCCACATACGCCTTTTTATCTATCTTCGTCTCGGTAGGCAAATCAAACAATACAAGTACCCACATAATACGATATTCACTAAATCTGTCCATTACATCTCCGGATAAGATATCTTACGCAGTTCACCACTAAAACATTTATAGAGTGAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 612-180 **** Predicted by CRISPRDetect 2.4 *** >NZ_OEST01000002.1 Bacteroides cutis strain Marseille-P4118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 611 47 85.1 29 T...CCG...TT..G................................ GACACAATTCTGAATAAGCGTCACCAATA G,G [593,595] 533 47 100.0 30 ............................................... CCATAGCATTAAACACATCAAAAGCTTCAA 456 47 100.0 30 ............................................... TACGGGAAGGCTTATTCCGCAAGGTTTTTA 379 47 100.0 30 ............................................... TGGAAATTGTGATTTATCTGAAATTGAGAA 302 47 100.0 29 ............................................... CGTATAGAAAGTATATTAGGTACACAGAT 226 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 97.5 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAAC # Left flank : CTATCGCAAAATACTCGAATATTCACTCATTGTCTCACAAATAAAGGCTGACTCCTGGCGGTTTGAAACGGCACGCGAACGCTACACCCAACTGATGCAGCACCAGCCGGAAGTCATCAAACGAGCGCCTTTATCCCATATCGCATCCTATCTGCTGATGACGCCCGAAACACTGAGCCGGGTACGTTCGGGCATACTGTAGGCCACCCATCCCTGTCTAAAACTCCGGATACCGGTAACATAATCTGTATTTCCATGAAAAACAGAAAAAAACGGTTATCTCTACGGGCAAAATATAGGGTTCTTTGCATGGTGAGCGGTAAAACCGTAGGTGGTCAAGCGTTATTTTGCCGGATTATCCGGGGCTAAAAAGGGCAACGGATAAGTAGCAAATCTTTCTCTTAGCCCTTCATTATCCTACATTTTAACGATTTGGAAAGGTATATAAGAATTTGGCTTAACTCTCCTCAATACCAAACACTTACTTTATTTATCCAAAT # Right flank : CCTATCAATTCATTAGTACATCCACGGAATGGTTGTGATTTGCTTTCATTTTACACTACTGTCCAAAGAAATTACCCCATAGGTTCAGTTGATCTGAATCGGAATCATTCATCGGACGTTTTGGTTTAATAAACAGTTCGCCTAAAGGCTTCCTCTCAAAGAGTACTTTGCCGACTACGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //