Array 1 405373-410522 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034543.1 Streptococcus periodonticum strain KCOM 2412 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 405373 32 100.0 36 ................................ TTGAACTGGGTTGAAACAGTTGGCATCGCTAGGAAT 405441 32 100.0 36 ................................ AATTTTATTTGCAATCAAGCGTTGAAGTTTTAGATC 405509 32 100.0 35 ................................ ATCTTTTACTTGCTTGTCAAAAGCGGATTTTGTCT 405576 32 100.0 35 ................................ TTGTTTGTTCATTTATTGATCCTTTCAACTGTAGT 405643 32 100.0 33 ................................ AAGTGGTTTGGATTTTTTATCGGAACTAATTTT 405708 32 100.0 34 ................................ CTGAAAAAGGGCGCACAATTGTAGAAGGAGAAAT 405774 32 100.0 35 ................................ AATCATTCTTGTTTTCCTCCTATGTTTTTTATTTC 405841 32 100.0 34 ................................ TATCTTATCTGCAGGTTGCTTCGTGAAGACTTCG 405907 32 100.0 36 ................................ TTGAACTGGGTTGAAACAGTTGGCATCGCTAGGAAT 405975 32 100.0 34 ................................ AATTTGATTATTTCCAATGAACGCTCGTCTCGTC 406041 32 100.0 33 ................................ AACCTTAACGAAGACCAAAGCTTTGAACGATAG 406106 32 100.0 34 ................................ ATCAAAGAATCGCATACGTCCTTTTGGAACAAGT 406172 32 100.0 35 ................................ AGAAATAATGACTTCGAATTACTTGTTCCAAAAGG 406239 32 100.0 35 ................................ TCAAAAAGTCAATAATAAAACTACTTGGAAAAATA 406306 32 100.0 35 ................................ CTGAAACAAGTGTACGCAGACATATTACCAAAATT 406373 32 100.0 33 ................................ TCAAAAAGTCAATAATAAAACTACTTGGAAAAA 406438 32 100.0 33 ................................ ATCGCTGCGGTCATGATAGATTCATTGCTTGCT 406503 32 100.0 33 ................................ TAGATTGCTCATATTGCCAGTACTTATTTCGTC 406568 32 100.0 34 ................................ TATCTTATCTGCAGGTTGCTTCGTGAAGACTTCG 406634 32 100.0 34 ................................ ATTTTCGGTTTCGTTATCCGCAACGATTGCTTGT 406700 32 100.0 34 ................................ ATCGAATGAAGAACTTGCGATATACAAAGTACTG 406766 32 100.0 33 ................................ ATCAAATTCTTCGTATAAGATTTCATAAAGGTC 406831 32 100.0 34 ................................ TATCAGCCAGTCAAGATTCTTTTTGGCTTTCTTT 406897 32 100.0 35 ................................ CTGAAAAAGGGCGCACAATTGTAGAAGGAGAAATT 406964 32 100.0 34 ................................ GATTTAAAACACTTATCCAAGGCGCTGGAAAAGA 407030 32 100.0 33 ................................ AAACAATTGGCGGATGATAAGCTCGCCGATTTC 407095 32 100.0 37 ................................ AAGTTCTTCCTTCGACATCCTGCTATATTTTTCTGCC 407164 32 100.0 36 ................................ ACCTAATCTACAAAACTAGCGTGGCAATGTGGGCAA 407232 32 100.0 34 ................................ TTCTGCGGTAAAAGCTCCACTTGAAAAATCCGTA 407298 32 100.0 35 ................................ TGTCTTTAGCTCGCTAATTTGTCGCTGCTGATGTT 407365 32 100.0 35 ................................ TTTTGGAAGCGCAGCATGTATTTAATAGCGTTGCC 407432 32 100.0 35 ................................ AATTGAGGTGGCACCGCGCTCATACGCCCTCACAC 407499 32 100.0 35 ................................ CGAACGAGTGAAACGGGTTTGATACTCACCCGAAA 407566 32 100.0 36 ................................ TCTCCTTACAAATATCTGATAGGTATTTTTCCGTCA 407634 32 100.0 34 ................................ CTTGTCATACTCATAAAAACCACCCACTTCGTCA 407700 32 100.0 33 ................................ CGCAACTGCATTTACATTCTGCATAAACTCTTT 407765 32 100.0 35 ................................ CTAAAGAATTGATTTTTGGAGACGAACCTAACAAA 407832 32 100.0 34 ................................ AGGGAATTCTAAAAGATTGTTACACTATCAAATG 407898 32 100.0 34 ................................ TCGTGTAACAACAGAAGACGGTAAAGTTCAAAGT 407964 32 100.0 33 ................................ TGGTGGTTATAGACAGAATGTTGCTGAAAATTA 408029 32 100.0 35 ................................ TGCCTTGTCTGGGAAATTAACAAAGCAAATTTGGT 408096 32 100.0 35 ................................ ATCGTTCCGGGTAGAAACACTAAAATGTTACTCCC 408163 32 100.0 34 ................................ ACAATCCCAAAATTGTATAACGGACGGCTACACG 408229 32 100.0 36 ................................ AAACTTAGAACCAAACAAGGTTACAGGTCTTAAAAA 408297 32 100.0 33 ................................ TTTATATTTGATGATGAACTTTACAAAGATGAA 408362 32 100.0 34 ................................ TAGCATGAGATTCACACATTTGTCTTTTAAGGAT 408428 32 100.0 34 ................................ TAATAGTATTATTGGGCAGTTACGGGGTATGTAT 408494 32 100.0 35 ................................ AAGTGACGGCGGTCTTTTATGTGTCGAAAGAAAAC 408561 32 100.0 35 ................................ TGAATCCCATCTTGGCTAAGCAACGTTTAGGCTAG 408628 32 100.0 34 ................................ TGGCGTTGAACGTTGGCGTCCGTTTGTAGAGCGT 408694 32 100.0 35 ................................ AACCTCAGTCTGGTTAATATTAGTCTGGTTAATAT 408761 32 100.0 35 ................................ GTTTAAAAGCTCTTTAGCCCTCACTCTCTGTCTCC 408828 32 100.0 34 ................................ TTGTACTAAGCATGTATGGCGGGTCAATATACAT 408894 32 100.0 35 ................................ TCCTGACTAAGTGAGATAATCTTGTCTTGTTGCTC 408961 32 100.0 34 ................................ TTCGTCGTCAACGAACTCCATGAACACTCTCATC 409027 32 100.0 34 ................................ TTAATTATTTGATAAAACTTGTGATAGGCTTAAT 409093 32 100.0 36 ................................ AAAGGCGAGCCAATCCAAAATCGCAAACTAACAAAC 409161 32 100.0 33 ................................ TGTTTTATTTTCATTGTGTTCCCTCATTTTTTT 409226 32 100.0 35 ................................ AAATTGTTTGATAATGTTATCTCTTGCATACTTCC 409293 32 100.0 37 ................................ CAATCTGTGCCAATCTTTCAGCTTGTCGTTGTATAAC 409362 32 100.0 35 ................................ TGGATGAATGAAACATGAACAATGTAAGCGAGAAG 409429 32 100.0 33 ................................ ATCATTAGCTTCAATTATTCCATTGATGATAAG 409494 32 100.0 36 ................................ GTCGAATGAAATTGTTATAGGACGAGATATAAAATC 409562 32 100.0 35 ................................ AAGGTGCAGAGTACTATTTGCAAGTTTGGGAATTG 409629 32 100.0 34 ................................ TGACTTGGGTAAGGTAAAGTCTGGAGAAATTATC 409695 32 100.0 35 ................................ AATGGCATCTAACACTTCTTTTTTAAATTCTACCG 409762 32 100.0 33 ................................ TAACAGCATTATTGGGCAGCTGCGGGGTATGTA 409827 32 100.0 34 ................................ CATTTTTAAAAGGCCGTACTATAAAATAAAAAAG 409893 32 100.0 33 ................................ CCTATTATCCTAGGTACTAGTAAAAATATTAAG 409958 32 100.0 35 ................................ ATGAGTGAGAATATGATTCTTCCAGTCGCAGTTGG 410025 32 100.0 34 ................................ TTTTCTGCTTCTTCTGCTACCAAATCAGCGATCG 410091 32 100.0 34 ................................ TGTGTTGGCGTTTACATCACCGCTAGCGTCATCC 410157 32 100.0 34 ................................ CCAGATTTGTTGTGTCCTTTTTTGACTCCCTGCA 410223 32 100.0 35 ................................ AAAGTTTTCCCCGAAAAGTTCTAAAACCATTTTCC 410290 32 100.0 33 ................................ ATCACTACCAAGCATTTTTGCTTGATATATGCC 410355 32 100.0 34 ................................ TTTCTGCCAAAGCTTCCATCTGGTGTGTATAAAT 410421 32 100.0 35 ................................ AACAACAAGTCGAAGACCTACAAGCACGAGTGCAA 410488 32 81.2 0 .....................A.A....CTTA | AC,A [410509,410516] ========== ====== ====== ====== ================================ ===================================== ================== 78 32 99.8 34 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : CCAAAGCAATCCGTGGAGAATTAGAATCGTATCCACCATTTTTAATCTAGGAGTAGGCTTATGATGGTTTTAGTAACTTATGATGTTAATACGGAAGCAGCAGCAGGTAGGAGACGTTTACGACATGTGGCAAAACTTTGTGTTGATTATGGTCAACGTGTACAAAACTCAGTTTTTGAATGCTCATTGACTCCAGCCGAATTTGTAGAGATAAAAAATGAACTATTAACTATCATTGACCAAGAATCAGATAGTGTTAGATTTTACTTACTTGGCAAAAATTGGCAAAATCGTGTTGAAACGATTGGTCGAGATGATAGTTATGACCCTGATGTAGGGGTATTGCTTTTATAAAAATTTGTGTGCGAACCTAGGTTACACATCAAAACCTGTGACATTCGCGCATCAACTTAGAATTATAGTGGCAAAAATCTCGTTTTATTGGGGAAACTAGCTCAATAGATTCTTGATTTTAGCTACAAACAGTGTAACTATGCGCT # Right flank : ATAAGCCTTTGCTCCCTTTCAAAAGGTATGCTACATTTTTTAACTGTCTTAGTCTTTGACAATACTGAAATTTTGCAGAAGTGTCCTGAAATCTTAACAGTATTTTTTGAAATTCTCTTACTTAGTGGAAAGAACGATTTACTTAGTGAGAGAGTGTACCAAAACTTGAGATTGGATAAATAGCGGCCCCACTTACATCAACATCTGAGGTCAGAAAGGTTCTTACTTAGTGTATACATTTTAGGTGGAGTACCTGAAATAATAAAGTTACCAACATCTTCCAATATCCCCCCATCAAAAAAGAACAGCTCAATGGCACTAGCCCCATAAAATGAGACACAAGAAAAGCCCTCCTGTTGAAATCTAGTAAACTAGAAACAGGAGGGTTTTGTTATGGTCAAAAAAGCGTATTCGGTAGAAACCAAGTTGGCCTGCATTGAAATGAAGAAGGTAGGTAAGTCCAATAAGGTCATCATGGAGACTCTGGGCATCAAAAATGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //