Array 1 9010-11658 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMVR010000072.1 Klebsiella pneumoniae strain S3 NODE_72_length_15078_cov_55.599253, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 9010 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 9071 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 9132 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 9193 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 9255 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 9316 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 9377 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 9438 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 9499 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 9560 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 9621 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 9682 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 9743 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 9804 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 9865 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 9926 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 9987 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 10048 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 10109 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 10170 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 10231 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 10292 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 10353 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 10414 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 10475 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 10536 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 10597 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 10658 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 10719 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 10780 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 10841 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 10902 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 10963 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 11024 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 11085 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 11146 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 11207 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 11268 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 11329 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 11390 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 11451 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 11512 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 11573 28 96.6 29 .....-....................... GGGTTCACTTGGGTGAAACTGAACTAACT 11630 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //