Array 1 2722-4625 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSMK01000085.1 Cupidesulfovibrio liaohensis strain XJ01 NODE_177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 2722 36 100.0 33 .................................... GATCTTCACCAAGATGATGGTGGCGATGGCGAT 2791 36 100.0 33 .................................... TTATTTAAACTTTGATTTCTTGGAGGAAAAGAC 2860 36 100.0 34 .................................... AGTTTCACCAGCCAGATTGCGAACATGGTCACAA 2930 36 100.0 33 .................................... CGCTTCAGGGCGCGGCGTTCGTCTCGGTGAACT 2999 36 100.0 32 .................................... TCTTTTTTTACTTGCGGAAGCCTTTCATGACT 3067 36 100.0 32 .................................... TTTTCAGGAATGGTGATTTCACCATTGAAGAC 3135 36 100.0 31 .................................... AAGTTGAAGTCCTTGGAAATTTCTTCGAAGA 3202 36 100.0 33 .................................... TCTTTCAAGACGGGCGTCCGTGGCGCAGCACCA 3271 36 100.0 33 .................................... TTGGCAAGGGCTACTCCCATGAAGCCCACAGGC 3340 36 100.0 33 .................................... TCTTCACAGTGCGATGTGTTTACCCCCTGAACA 3409 36 100.0 33 .................................... GCATAGAAGCGGGGGAGGAATGGGGCCAGAATG 3478 36 100.0 33 .................................... TTCATAACCTCCGCAAATCTTGGGTTTTCATAT 3547 36 100.0 31 .................................... ATCCAAAGTAAGCTCCTGTCCGCGCAATTCG 3614 36 100.0 33 .................................... CGATGCATCCATATAATTTTTTCCGGTCAAACC 3683 36 100.0 34 .................................... ACCGTCTACCTGCATGTCACGCCCCGACTCTGCT 3753 36 100.0 32 .................................... CCAATCACACCGCCGTTGTTGGCATAATTGTC 3821 36 100.0 34 .................................... CCCGTGCCTCGTTCTCTATGGCCTTGCTGATGGC 3891 36 100.0 34 .................................... TGTTCCAGTGTCAACTCCTGCCCGCGCAATTCGG 3961 36 100.0 35 .................................... AACACGCACAATAGAAATCTCCTTGTCCTTTGCAA 4032 36 100.0 34 .................................... GGGTGAAAAACACGACGAGGGCCACGACAATAAT 4102 36 100.0 34 .................................... TTTTTGGTCATAATCAACAGCGGTCACACGGCCA 4172 36 100.0 32 .................................... TTCTGACACCAAATACTTCAAACACACGCTGA 4240 36 100.0 33 .................................... ACGGTGCATGTTATGGAACTTCATTCCGTATAC 4309 36 100.0 34 .................................... TCAATGTTGCGTTTCTTGACGAAAAGTGTGACTC 4379 36 100.0 34 .................................... GCTGTTGCGATGAGTCGTTCCGAAACCCTGTCGA 4449 36 97.2 35 ......................T............. CCACTGTTGATCTTCGCAACCTGTCCCTGACGGGA 4520 36 100.0 34 .................................... CGTTGTCTACCAAACCGATTTCGGTCAGGTATGC 4590 36 88.9 0 ..........G.....................C.CG | ========== ====== ====== ====== ==================================== =================================== ================== 28 36 99.5 33 CCCAAAAGGGACCTCTACTGCGCAGTAGGTTGTGAC # Left flank : CCCCGCATCAAGCACGCACTGGTACACGCTGGCCTGCACCCGTTGTCCGTAGCCGTCCAGAACACGGCTGACGCGCAACCGCTCCCGGTCATCCGTGATGTCGTACGCGATGATGTGCATGCCGCTCCTGCCAACAGAATGCAGTGTGACGGGTAATATACCGTGAATGCTCGGGATGTAGGCCACGCACGTCCCGCTGTAAAGGCAGGTGGATATGCAGGAGTGCGCCCAGGCAGGTGCGCAGGTGCGCTGCTGGCAATAACCTGTTGTGCACGTTGGTGAAATTTTTTTGGGTCAAGATCGCGTGCATAGACGAGTGAGGCTGTGTAAACCCCGTTTCCCGCAATCTGTAACCATCTGATAAAGAAGCTTGTTTTTCTGACAGACCCAAACGCAAAGGACCCCCCTGTGGAAAACGTGTGAAAACTTGCCCGAAAGGGTGGGGGGTGCCGAAAACAGGCTTGAAAATCCTTGCGAGAGTAGGGTAAGAGGGAGTCAGT # Right flank : GTCACATCAATGACGGTGCGCCCCCAAGGTTCACGCATTCCTTACCTCGCAAGCAGAAAGGCCCACGCGACATTCCGCGTGGGCCTTTCTGCTCATGGCGCCTTCAGCGCCGGGTTTGCGGCATCAGCCGTGATGCTCCGAGCCGTTTTTTTCGGTGTACATGCGGGTGTCGGCCTTGCGCAGCAGCGTGGGAATATCCGTTCCGTCGTGGGGGTAACGGGCAATGCCGCAACTGGCGCCTACCTGCAGGATGCGACCATCCAGTTCGAACGATCGTGCCACGGCCCCGCACAGCTTGCGGCACAGTCGCTTGAGGTCGTCGGGGTTGCGCAGCCCCTGTACCAGCACCACGAACTCGTCCCCGCCCCAACGCGCCACGGTATCGCTCACGCGCATCTCCTCCGACAGTCTGCGCGCCACCGCCTTCAGCAGGGCATCGCCCACGGCGTGGCCGCACGTGTCGTTGATGAGCTTGAACCTGTTCAGGTCAACGAACACCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCAAAAGGGACCTCTACTGCGCAGTAGGTTGTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //