Array 1 102866-102594 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000021.1 Streptomyces sp. SID8359 SID8359.c21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 102865 29 100.0 32 ............................. CGGTTCCGCAGGCGTTCGAGCTGGACGAGGAG 102804 29 100.0 32 ............................. GTGCGGATGGCGCTCCGTACGTCGGACGGCCC 102743 29 100.0 32 ............................. GTGAGCGGATCATGCGGGTGGGTCTGCCAGGC 102682 29 100.0 32 ............................. TTCTCCACCGCCGCCGGCTGGTCCGTCGCCGT 102621 28 89.7 0 ......................-..A..T | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TGACATCGGTCCGGAGTGCGCGGACGCCGTACGCGAAGGCATTCTCCGATGGCTGACCGGAGCGACCAGGAACGAGCTGACGTCCCACGACCGCCCACCGCTTCCCACGGCGGAGGAGCTGGCCACCGGGCTGCACGTACGCCCGGAGGCGGGCCCCGGGCTCATCGCCCTACGAGCAGTGCTCCGACACTCCCGGCTGCACCCCGTCGACTCGCTACCCATAGCCCACCTGGGAGCGGGGTGGCAGGCCGCCGACAAGGGGGTGGGGCGGCTCTGGTGAAGGGGGCTGAATTGCGGGCGGTGGTACGTCGAGCTTGCGGCTGCGGTAGCGGGGGCGCGGCCCGAGGCTCATCCGGCGGGGTGGACAGCGTGCCCACGACCGGAACAATGGGGACTCGGCTCGCGCCTCGGGCCGCCGATGAAGCGAGGTCGATATGTCCGTTTCCCGGGAAGTGGTGGAAAACAGCACCTCGGCCGCATAAACCCGCAGGTCAGGAACT # Right flank : CGGCGGAGCCGACGAACGCCCCCCATCTGCTCGTTCCCCAGGGCGTGCGCACCCTCCGAAGCACCGCGAAGGACGGCCGACGGAGGATGCACAGCCCCGGACCTGGCGGCGGCAGCCGGCGCTCGGTGCAGGCGCTCAATGGCCGTACGCCCCGCACGAGTCCCGGCCAACGTCTCCCGCCGCTACCGTCCCGCAGCGATACAGAGGTCACGCCCGCGCCGCATACTCCGCGAGGGCGAGCGCGCAGTGGACGGCATGGCCGTCCTCGCTGACTCCCCACGCGTCGGCCAGCGCCTCCACGATGCTCAGGCCGCGACCGCCCTCCGAGGTCTCGTCCACGGCCCGGAGCACAGGACGTACGGGAGAGCTGTCCTCCACCCGCATCGTCAGATGGGTGACGTCAGCACACCAGGTGACGGTGATGTCCTCTCCGCCCCCGTGCTGGAAGGCGTTCGTCACCAGCTCCGTGAGGACGAGCGCGGCCACGTCGATGCACAGCT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched ATGGTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 364660-364082 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000003.1 Streptomyces sp. SID8359 SID8359.c3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 364659 29 100.0 32 ............................. ACGTCGGCGCGAATGCTGCGCTTCTGGGGCTT 364598 29 100.0 32 ............................. TGCCAGAGGTGCCCGGCCGCCGTCGCCCCGTA 364537 29 96.6 32 ............................A ACGCACACCATGTCTGAGAGGGGACCCGCCAT 364476 29 100.0 32 ............................. GAGCGTCGTCCGTCCGATCTGCGGCCGGGAGG 364415 29 100.0 32 ............................. CTTCCGGCCGCGTCTACGTAGCCTTCCCACTC 364354 29 100.0 32 ............................. ATACAGGGCGGTTCCCCGGGGCGTCTGGGTCA 364293 29 100.0 32 ............................. ACGGCCGGGCGCACGATCAGCGCTCGGAAGCC 364232 29 100.0 32 ............................. TCGATCCGGATACTCGGGTACCGGGCCTCGTC 364171 29 100.0 32 ............................. GTCGGACAGGTCCGTCCGCGCGGGTGCGTCGT 364110 29 96.6 0 ......................C...... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 99.3 32 GTGATCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CACCGAAGGACGTCTTCGCCCGCGCCTTGCACATGGCGGACCTCTTCGCGGACTCGAAGCAGGACTTCCCGGGGGCCGCCAGGATCATCGACCGGGTACTGAAGCTGAAGGACGAACAGCCCACGCCGGCGCAGCGGTTGCAGCTGCTGGTGTTGCGCGGGGACCTCGCGCAACGGATGGGAGACGCGGAGGGAGCACGGGGGTGGCTGGAGACGGCGGGATCGGTTCAACTCGCCGCCGAGGAGGAGGCCTTGGCCCGTGATGCGCTGGCTCGACTGGAGGAGCTGCGGGGGTGATGGAGCAACCGGTGGACCGCTGAAGGCTACCCCCCCAGGCTCGGCGGGGGCGCCCCCTCACGTCTCTCCGCCGAATCACCCGCCATGTGGGGGGCTCTCGAACCAACTGCGCCCAGCCGCCCTCTCTGTGATCATGTAGAGGTGAGCACGCAGCCCAAGGGTCACGAACTGGCAAAACCCCTGTAAACCAGCAGGTCAGGAAGT # Right flank : GAATCAACAGCGGTAAGGGTGACCTCAGCAGCTCTCCTCGAACTTGACTGCAGTGAACTCGACCGGCTGCCCGTTCAGGGCGGTTCCGGGGGAAGGCGACTGGGTGCACACCCGCCAGTTGCTCTCCATGAGCACCTTCCGGTCCTGGGCCGCATCCTTGACGGTGATCGACGTACTGGAGTCGAGTGCCTTACGGGCGGCCTTCACGGACTTCCCGACGAAGTTCGGCATCCTTCCACCGATCACCTCAGGGTCTTTCGCATCACGAGCCGGGCACTCCTCCTCCAGCTTTACCGTGCCGAAGTCCAGCACCGTGTCTGTGGGGATGACCTTGCCCGCCGCCATGTTCTGCGAGCAGACCTTCCAGTTCCGGTCGAAGGCCTGCATACGGCCACGACCGGCGCTGTCGTGGGACCTCAGTGCGTAGAAGCCTTCCTCCTGCGCAGCGTCCTGTGCGGACTGGAGTCCCATACCGACGAAGTCGGGAACCGCCCTCGACT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 458164-458982 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000007.1 Streptomyces sp. SID8359 SID8359.c7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 458164 29 100.0 32 ............................. GGCAAGCCGCCCGCCGAGACCACCCAAGCCCA 458225 29 100.0 32 ............................. TTGACGAAGCGCTCCGCGAAGGAGTCGCTTCA 458286 29 100.0 32 ............................. CCAATAGTGCAGGTCTCGGTCTCTGAGCAGCA 458347 29 100.0 32 ............................. CTGACGGGCTGCCCCGTGGCCATGGCGTAGTC 458408 29 100.0 32 ............................. GCGTCCGTCTTCCACGACAAGCCGGTCGACTG 458469 29 100.0 32 ............................. TCCATCCCGGAGGGGTTGCCGGCCTTCTTCTT 458530 29 100.0 30 ............................. GTCCGCGACCGGACATGGCAACCTCGCCCC 458589 29 100.0 32 ............................. CGGGAGTTCACCGAGGACGAGGTGACCCGGAT 458650 29 100.0 32 ............................. CAGTTCGACAGCCTCCTCGCCGTTCTCACCGA 458711 29 100.0 33 ............................. GGGTCTACCTCGTGGCCCACGCCCAGAGCCTCG 458773 29 100.0 32 ............................. CTGGTCCGGCTGACCGGTCTGCCCCTGTGGGT 458834 29 100.0 32 ............................. GACGATCGTGTTCCCGTCGCCATCCTGAATGA 458895 29 96.6 32 .........................C... GGGGCGATGACGATCCCTACCTTCCGGCACCC 458956 27 82.8 0 .............AC.......--A.... | ========== ====== ====== ====== ============================= ================================= ================== 14 29 98.5 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : AAGTCACCGCCGACCAGACGGCCGGCATGCCCGAAGCCCTCGCCTCCGCGGTCCGCGAACTGGTCGCGGAGTACGAGGCCAAGGAGTCACCGGAAGCGATCTGCGCCCGCGACGCGGACAAGCTGGAGTGCCTGCTCCAGGGCATCGAGTACAAGGCCCAGGGCTACGAGAACGCCCAGCGCTGGATCGACAACAGCCGGAGGCGCCTCACCACCGGGACCGCGAACCGTCTGGCGGACGAGCTGCTGGCGCAGGGGGGCATCGATTGGCTGCGGTCGGCTCTGGGAGGAGAAGCAGAGCTAGCCACAGAGCAGCCCCTCAGAGGGGCACCCATGAGCGGCCTTTCGGCGGTGACGATATGGCACTGTGGGCGTGCAGCCGGGTGAGGAGCCCGTTCGCTGTGTTCACTCTGGACCACCTACAACAAGGGAGATATGTCCGTTTCCCTGGAAGTAAGTAAAAACAGCCCCTCGGTGACATAAAGCTGCAGGTCACGGACT # Right flank : CTGCCTTGCCCGTCTCTTGGGTCCCGAGCCTCGGGCTTCGAGGCCGGTCCGTTCACTCTTTCTCGTGTACGGGTACGGGCGTGGCCCGAAGCTTGGGCTCCGAGACCCGGGCGTCGGGACACGAGGCCCGGGATTCGAGCGCCTTCTTTAACCGGTAGGTAAGAGAGGGGGTTTGGGAAAACCTCCCGCCCACCCCACCCAGGTCACAGCTGGGGAAGTATGACTAATGGTGGCGGCTTGCGGCGGAGTGTCACGAGTGCTTACGGTTCGAGAACTAAGCGACCCCGACAGGTGTTGGAAGCACCAGGCCGGGGTCTAACCGCAAGATCGCTAACGAAGAAGGACGATCCCGTGGCTACCCAGCACATTAGCTCTGCCCTGCAACCTCCCGCACTTTCCCACGCGTACCCGATGGCGAATCCGGGCTACGGAAAGCGCTCAGCGCCGAACCAACTGCCGCGTAGCGCACGGGATTTCTCCTTACTGCCGACGCGGGAGCG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 460596-461053 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000007.1 Streptomyces sp. SID8359 SID8359.c7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 460596 29 100.0 32 ............................. CCGCCCGCCGATCTGGAAACGGCCGGGCAGCA 460657 29 100.0 32 ............................. AGTTGCTGCAGGACCCGCATGAACATCGCCGC 460718 29 100.0 32 ............................. CATGACGGGGTCGGTCCGGACGATCATGACGG 460779 29 100.0 32 ............................. GGGTGGCCCTCGCTTCGTTGTGCGGACCATAC 460840 29 100.0 32 ............................. CGTGCCGGGTCAGCTCGCCTCGGTGCACCCAG 460901 29 100.0 32 ............................. TTCATCGCGGGCGGCGCGATCCGGACGAGCAT 460962 29 93.1 32 .......................A.C... GTGACCATCACAAGGATGCCGACCGTGCGTAC 461023 29 72.4 0 A..........C.AC..C...C.A.G... | TC [461046] ========== ====== ====== ====== ============================= ================================ ================== 8 29 95.7 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CCCTCACCGCGGGCCTCCCGGCCGAGATCAACTCCCCCGTCGGGTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCTCCGAACCTGCCCCCGCAGACCACCCGCCCCACCCCGGCCACTCCCGCCACCCGCGTCCTGGTCGAATGCACAGAATGCGGCACCCCCGGCCCACCCGAAGCCCTCCCTGACGGCCTCTGCCGCCCCTGCCGCCAAACCCGCGACACCAGCCCCGAGAACCCGCCACCCGCCCTGACCACGCCACCCGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCTGTCTGAACCGGACACTCACCGTGCTGCTTGGCCTCAGGGAAACGAGGGACGGTCTCGGCAGCCGAGAGGCAGAATTGCTTTTGACAGACGAGCAACCGACCAGCAACGGCCCGTACGGTGGGGAAAATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CACCAACCCCCTCACACCCCCAACTCCCCCCGCGAATCCGCAACCGCCTCCGGATACGCGGCCAGCATCCGACGGGCCACCGGCAGTGGCATCCGCACCACCACCGGCTGCGGGAGTGTCAGTTCGCGTTCGGCGACCGCCGTACGCGATGAACGCACCCGGTCCGTCACCCGTGCCACCACCCGGACGTCCAGGGTGAACTGGACCAGCACCGAAGCGAACTTCGGCTTGTGCAGGGGCATCGAGCCCGCGCCGCCGGCCGACGCGTCGGTGGCCGAGCCCGCGCCGCCTCCGTTGGCCATCAGTTGGTTGAGGCGGAACTCGTCGGCGTTGAGGACTCCGGCGCCCAGGAGGCCTCGGGCCTGGCGGCTCTTCTCGGCTGCGGACTGGGCGTCGGTCTGGGTGGGGCGGGGGGCGGTCAGGTCGCTCTGGGCGACCGTTTCGAACGTCATCTTGTCCCCCGCCCCGAGGATCCGGCCGGCTCTCAACCGGGCGTGGAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1651-895 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000008.1 Streptomyces sp. SID8359 SID8359.c8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1650 29 89.7 32 A.G.....................G.... CGCACCCTGGCCCTGCAGAGTGACCCGCTCGT 1589 29 89.7 32 A.G.....................G.... GGGGGACCGTAACTTGAAACTGCCATGGCCTG 1528 29 89.7 32 A.G.....................G.... GAGCGACGTCGCGCCGCCGACGGACAGGGCGG 1467 29 100.0 32 ............................. TCCTCTAGGCGGCGGCCGGGGTAGTACCGCTG 1406 29 100.0 32 ............................. GGCTCGATCGCTGCACACTGGGTGAGCGCCCC 1345 29 100.0 32 ............................. TCGATGCCGTCGACGAGGACGAACACGCAGGA 1284 29 100.0 32 ............................. TTCCAGGGGACGTGCATGCCGGCGGTGCCCAT 1223 29 100.0 32 ............................. AGGTACGAAGCGAAAGCCTGGCTCACCGCACA 1162 29 100.0 32 ............................. AGGCAGCGGGCGTCGGCGATCCGGACGATCTC 1101 29 89.7 32 .....T......TG............... CGTCGCGAGGAGCCATCACCACAGGTGGTGGC 1040 29 75.9 32 .........A..TG.A.......AG...T GCCTCACGGTGAGGCATTATGGGGTGGTATCC 979 29 86.2 27 .CA.....................GC... TAGGGCGACCCGTACTACGCGGAAGGC 923 29 75.9 0 C.GA.................T.CCA... | ========== ====== ====== ====== ============================= ================================ ================== 13 29 92.1 32 GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : TGCAGGCGGAGCGGGTGCAGAAGGGGGAGCGGATGGTCCCCGCGCACGCGGGGGTGGTCCAACTCCAGTTGCTCGATCACCCGGTTCTCCGCAATGGTCCCCGCGCACGCGGGGGTGGTCCCGCCGCGTGCCCGCGCCGCTTCCCTCCGGCGAGATGGTCCCCGCGCACGCGGGGGTGGTCCCGCCTCCCGGTCGGCAGGTGCACGGCGGTCCACATGGTCCCCGCGCACGCGGGGGTGGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTCATGGTCCCCGCGCACGCGGGGGTGGTCCCGTGTCGCGTTTCGCCACGAGCTTCTCTCCGTC # Right flank : GATCTCGACGGGTCACATGAGTACCTGAAGCCCCCTGTAACTAGGGCGATCCGTACTCTGCTCAAGAATCAGGCGCTCAAGGACACACCGAATCGACAACATGTCGAGCTATACGGGCTCAGGAAACTACTGTCGCGGTATCGGGAACACACAGACGCAAGTAGCGAACTCGATGTAGCCCTCACCTGCCTTCAAGGGTCAGGAAGTCCACACACGCCGATTTACGGCTAAGCAGCAAGGAGCCTCCAGTGAGTAGAAAAGTCACACTTACCGGACAAGACGAAGGCGGGCAGCCGCTGTTCGCCTTCTCGGTATCCGCCCGACTGGTCGTACATCCAGCACTCTTCCTGCTGGCCTGGGCAATTGCCGCCATCACAGCCATCGCCTCAGTCGTCATGCTTTTCCCAGCGCGCTAACGGTCTCAGACCCAGAGCCACACTTAGCCTTGCGGTCGCCCCCCCCGTTACCTTTCTCGTGGCTCCGCAATGGGGCCTCCGGCC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : ATGGTCCCCGCGCACGCGGGGGTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2302-1967 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000008.1 Streptomyces sp. SID8359 SID8359.c8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2301 30 96.7 31 .............................C GGCGACGCTCCGCTCTGCCTTGCGGACGGCT 2240 30 100.0 31 .............................. AGCTGGACCGGTCGGGCACCGATCTCGCGCT 2179 30 96.7 31 .............................T GCAGGCGGAGCGGGTGCAGAAGGGGGAGCGG 2118 30 93.3 31 ............................AA CTCCAGTTGCTCGATCACCCGGTTCTCCGCA 2057 30 100.0 31 .............................. CCGCGTGCCCGCGCCGCTTCCCTCCGGCGAG 1996 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 6 30 97.8 31 ATGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : GATTCGGCAACCTCACGGAACTCAGCGTTGTGCACCTGGAACAGCTGACCAGCGCCCTGTACGTGGAGGACCACACCCAGGTCAGCACCTACGCGGACGCTCATGAGTCACTCACGGCCGCAGCACTCTCCGTTGAGAAGTCACTCGACCTGATCAAACAAGCAAGGGACCAGAAATGATCATCCCCGACTCTTCAAGCCTCCCCGTCGCCTGGTGGAAGTCCTCCGCGTCCCACGCCCAGTCCGACTGCCTGGAGTGCGGCATCGTCGACGCCGACCACATCGCCATCCGGGACAGCAAGACGCCGAACGGGCCGGCTCTGGTCGTCGGCCAGGGTGCGCTCGCGGCGATGGTCGGGGCGGTCACGGCCGGGCTTCTGTAGCTCTGTGCCGACGGGCGGAACAGTGAGGACAACCTGCGAAGCAGGGGTGCTTATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCCACTCAGCCGCATAAACCCGCAGGTCACGAACT # Right flank : CCTCCCGGTCGGCAGGTGCACGGCGGTCCACATGGTCCCCGCGCACGCGGGGGTGGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACTCATGGTCCCCGCGCACGCGGGGGTGGTCCCGTGTCGCGTTTCGCCACGAGCTTCTCTCCGTCATGGTCCCCGCGCACGCGGGGGTGGTCCCCGCACCCTGGCCCTGCAGAGTGACCCGCTCGTATGGTCCCCGCGCACGCGGGGGTGGTCCCGGGGGACCGTAACTTGAAACTGCCATGGCCTGATGGTCCCCGCGCACGCGGGGGTGGTCCCGAGCGACGTCGCGCCGCCGACGGACAGGGCGGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 60208-60541 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000015.1 Streptomyces sp. SID8359 SID8359.c15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 60208 29 100.0 32 ............................. CGTGTCCTGAACGACACGTCCGAGGCGGAGAT 60269 29 96.6 32 .....................T....... CTCAGCAGGATCTGACAGGAGCATCCATGGCC 60330 29 100.0 32 ............................. ACCTCCCGGTGGTCAGGGTGGGGTCCGCTGGA 60391 29 100.0 32 ............................. AAGGGCCCCTCGCACATGGCCAAGCTGACCGG 60452 29 100.0 32 ............................. CCGATGCACAGGATGATGGCGACCATCGGCTT 60513 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : TGCCACCATCGACTCCCCCACCGGCTTCCTCCGTCACCGCCTGACGACCAAGATCCCGCCCCAACTGCCAGCCGAGGGAACCGAATCAGGCACCACCGCTCCCACCGCCCGCAGCCTCCTCGTCGAATGCACGGAGTGCGGCACCCCGGGACCCCCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCCACAGCAACGAGACCGGGACCTCCCCGGCCGCGCCCACCGCAGCACCGGACGTCAAGGCCCGCATGGCGAACCTCCGGAACCTCCTCCGAAGCGTCTGAGGAGGGCGCCAGCTGATCAGCATCCATTGAGCGGCCACTTATCGGAGAACGGAGCCGCCGATCTCGGCAAACAAGGGCAGAATCTCTCCAGGCAGGCCCAGAGTTCGGGAACGGCCACCTGCACGGCGAGGGAGATATGTCGGTTTCTTAAGAAGTAAGTAGAAACAAGCCGCACGCCGCATAAAACCGCAGGTCACGAACT # Right flank : CGAGCAGCCTGAGCAGCACTACCTCCTTCAGCCGTGGTCCCCGCGCACGGCGGGAACGAACCCGCCTCCGTACTCGCCCCCCCAACCGGGGAGTAGGCACACCGGCACCCTGCCTGTCCGGTTGTCCGGGCGGCCCACGAGTCCCGCTGAATCCGGGCTACAGCGCCTCGCCGGGAATCGACAGACAGGCCTCGCGGAGGCGGTCCAGCAGCGGGTGTTCGGCGGCGAGCGCGGTGCCGTCGATGGCCGACAGGGGGCGGACGCCGATGCCCGCGTTCGTCGCGAAGGCGGCCGCCATCCCGTAGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTCTGCGGGCGGTGTCGGGTGCTCGCGCAGCAGGGCCGTCGTCACGCCGGGCAGTACGGCGGATCGCGGCCACAGCACGGTGCCGTCCCGGTCGATGAAGCCGACGTTCCAGGTGGCGCCCTCGGTCACGTAACCGTCGCGGCCGACGAAGAGCGCGTCGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 101932-102510 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGS01000013.1 Streptomyces sp. SID8359 SID8359.c13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 101932 30 100.0 31 .............................. ACACCGGGATCGTCGTCTCCGCCACGTCCAA 101993 30 100.0 31 .............................. GCCGCCGCCCGGGTCACCGGGCGGCGGCCCC 102054 30 96.7 31 .............................T GGACCGGCACCTGGAGCATGAACTTGAAGCT 102115 30 96.7 31 .............................G GGGCGAACTCGAATTACAGCTCGATTGCCCA 102176 30 100.0 31 .............................. CGTAGTCATCGCCCGACGGCCCGTCGCCGCC 102237 30 100.0 31 .............................. CCCTCGGCCCCTTCGCCGTCATGGGCAAGAG 102298 30 96.7 31 .............................T TCTCGATCTTCGGGGTGGCGTCGGAGATCCA 102359 30 96.7 31 .............................G TGATCACCGCCGGTGGCGCGAAGTACAAGGT 102420 30 83.3 31 ..........T..GT..........C...A GCAGCGCCACGGGCAACGGCTCGTACAAGAC 102481 29 83.3 0 ............T........A.-.C...T | A [102508] ========== ====== ====== ====== ============================== =============================== ================== 10 30 95.3 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : TACCTGACCACCGCCCTCACCGCAGGCCTCCCCGCCGAGATCAACTCCCCCGTCGGCTTCCTCCGCCGCCGCCTGACGGCCAAGCTCCCACCCCACCTGCCCCCGCAGACCACCACCCGCCCCGCCGCTCCCTCCGGCCGCGTCCTGGTGGAATGCACGGAGTGCGGCACCCCAGGCCCCTCCGAGGCCCTTCCCGACGGTCTCTGCCGCCCCTGCCGCGAAACCTGTGCCACCGGCCCCGGCGACTCGCCGCCCGTCCTGCCCGCACCACCCGACATCAAGGCCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCGGACGGCCGCCGATTCAGGGGAACGGGGGTCGGCCTTGGCGACCGAGGGGCAGAATCACTTGCGGCAGGCGGGCAGTCCGCCAACGGCGATCAGAACGGCGGGGGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : TGTGTGCGGCCGGACTGGTGAAGGCCGTCCAGCGTGCGCCGCGAGCGTAAGCGTGGCCGCACTGTCCGTTCAGCCCACCTGTTGGCTGAACGGACAGCGTGTCGGGCGGAGTTCGTCACCGTACCGGCGCCTGCGCGCAACACGTCACGTCCTTCGGCGCGCGGCCGGTGCGCCCGACCCCCCGTACGTTCCACGCCCGTCCGAGACGCTCAGCTGGTGAAGTATCCGGCGTCGAGCCCGACCCAGCCGGTGATTCCGCGCGGATCGTAGAGGTGCAGGGAGCCGTCGGTGAGGACCTCCCACCGGACGGTGAGAGAGCCGGAGACCCCGGCGCCCGTCGTCTGACCGACCATGCCCTGGGTGCGGTTGGGGCGGATATGGGGCGGGAGGGTGAGGATCTTCTCGCCGTTGGCCCAGGGGGCCTTGTCCGCACGGGACAGCCGGAGGTGGAGGTCGATGCGGTTGCCGACCTGGCGGTACTGAGGAACGTAGTTGCCGGA # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //