Array 1 2148-2648 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKB01000449.1 Azospirillum brasilense strain BR11019 NODE_449_length_5319_cov_5.469569, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2148 32 100.0 34 ................................ AGGCGCCAGCTTTTGTTCTCCTCGCGCAGCTCCG 2214 32 100.0 34 ................................ TCCAGTTGGACCAGCAACCCGCCCGTCTGCCTTG 2280 32 100.0 34 ................................ GCCTGCGAATGTATGCTTGCCGGCGGACCGGCGG 2346 32 100.0 37 ................................ ACGATGATGCGGCAGAGGTTGTACCTGACCGATGGCC 2415 32 100.0 35 ................................ GCCGAGACCATCAAGAAGGCGCACGGCCTGAACGA 2482 32 100.0 35 ................................ AAGCGCCTGGGCGTCCAAGAGGCGTTCCGGAAGAT 2549 32 96.9 34 ..............................C. CACACGCTCGAGGAAGCCGGGCTGATCGGAACGC 2615 31 81.2 0 ........T...........-..CT..C..C. | CC,G [2641,2647] ========== ====== ====== ====== ================================ ===================================== ================== 8 32 97.3 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : CTGGATGGCTACCCGCCTTTTCTATGGAAGTGAATCCCCATGCTGATGCTCATCACCTACGATGTGAACACCCAGGATGCACCCGGGCGCCGCCGGCTGCGCCGGGTTGCCAGAGCCTGTCAGGATTTTGGGCAAAGGGTTCAGTTCTCGGTTTTCGAATGCGACGTCGACCCGGCACAATGGGCCGTTCTGCGGGCCCGTTTGATCGGAGAAATCAATCAAGAGACGGATAGTCTCCGCTTCTATCATCTCGGAGCCAACGCGGCCCGCCGCATCGAGCATGTGGGCGCCAAACCGGTGCTGGATCCCGGTGGCGCATTGATCTTTTGATCGGTGCGAACCGGAAGCGGACACGAAACCCCCGAGGGGTTCGCACGTCATTCTCATCAATGACTTGTGCGGCTCCGACACCGGAATGACTGCTTCCGCGGCCGCTTCCGAAGTAGGTTCGCATCCGTCGGGGGATTGTGGGTTCTTGAACAAGTGCATAAAGATGAGGA # Right flank : CGAATCGCTCCTGTTGTGAAAATCGGTTCATAACGGCCCGGGGAAATTCAGCGTTCCCAGGGCATCGGCAGGTTCAGGCTATCTGTAACTTGATACGGGTGTATTGAGTCATGGTTGGGCTAAACCTGTTGATGTTTTAAATAGGTTAAGTTAGGCCGATTTTTGACGGCACTATTTCCATAATAAATCTTAAGACAAATGGGCCGTCACTGCTCAATTATTATCACTGCTTCGGGTGAAGGCTCACGATGCGCTGCGGCGGTTTGGTTCTGCCCGGTTTAGGTGTGGGCGGGGCGCCATCCGTCTGCTAAGGAAGAGGGCGCGGCCGCCAGCCGCGGGTGACGAGAATGCGAGGGGCGGGAAGCGCGTGTTCGTTGATAGCTTTATGAATGACCGATGCCTCTCATGCGCTGATGTCCGGTCCGTCCATGGCCGGGCGGCGCAGGCGGAGGAATGATGACGGAATCGTTCCCTGCCGGGGCACGCGCCGGGCGCCCATC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 7589-8487 **** Predicted by CRISPRDetect 2.4 *** >NZ_WFKB01000060.1 Azospirillum brasilense strain BR11019 NODE_60_length_14194_cov_6.104926, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 7589 32 100.0 36 ................................ CTCACCACCGCCTCTTCGGTCGGTTGAAGGTGCTGC 7657 32 100.0 35 ................................ GCGCGTCCAAGCGCGGAAAGATCTTTCCGGGAATG 7724 32 100.0 34 ................................ GGCTACACCCTGACCGCTGAAGACACCATCGACG 7790 32 100.0 35 ................................ TACTTTGGTGCGGACTGGGGGTTCAGCGTTGACCC 7857 32 100.0 36 ................................ GCTACGACATGACCATCATGGCGCAGATGCTCGGCG 7925 32 100.0 33 ................................ GCCATGCCTGCCAGCGAGGCCCCGGCCTTGGGC 7990 32 100.0 34 ................................ GAGAACGTGCCCCGCATCGCCCAGCGGAGCCGCG 8056 32 100.0 35 ................................ GAAGACGCATCCGCAACCGTTGCAGAGCCGCGTAG 8123 32 100.0 36 ................................ AGCACCACGGCGTGCCGGCGCTTGGCCTTGGCCCTG 8191 32 100.0 34 ................................ ACCTCGATCTGGGTGAACGAGGCCCGCGAACTGC 8257 32 100.0 34 ................................ ACCGCCTCTCATCCGGTGAAGGAGGCCGCGTAAT 8323 32 100.0 34 ................................ AATGGGGCTTTGACCGACACGCCGCGTCCTGAGA 8389 32 96.9 35 ............A................... CGTCCGCGTCCGCTTGGTCAGAGCGGGCGCGGCGG 8456 32 96.9 0 ....................C........... | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 99.6 35 GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Left flank : TCGTGCGCCAAGGTCCGCTTGCCTCGGCCGGAGCGGCAGTCGAGGCATGGCCTCCTCCCAACGGAATGGACAGCGGTTCGGGCGGTCGTTCGCTCGGCCCGTTAAGGACTTTTGTTCGGGAGAGGGGTGCGGTTGAGTGTCGGAAGAGGATAAGGATCGTCGTAATCGTCAAGGCTGAGGAACGGGTTCCGCTTGCCCCATCTGGGAGCACATGGCGCCCGCCGATGTGCAAACGGTGGGCGGAACACTGATCGGTGTCGAGGCGGCCTGCCGTATCGAGCACAGGGTGTCAAACCGGAGCTGGATTTCGGCGACGCGTTGGTTTTTAAATCGGTGCGAACCGGAAGCGGACATGAAACCCCCGAGGGGTTCGCACATCATTCTCATCAATGACTTGTGCGGTTCCGACATCGAGATGGCCGCTTCTCGATTCGCTCCCGATGGAGGTTCGCGCCCGTTGGGGGATTGTGGGTTGTTGAACAAGTGCATAAAGATGAGGA # Right flank : CAGATTATTACTATTTCGAATGCTTTGAATCGGGCCATCTTTATCATAGAACCCAAGTCACACTAGTTCGGATGGACCCTGATTTCTCAGAACATCAACAAAGACTGCCCAAGCGTGACCCGACATAAGCGGCTTGGTCACTGGGAGATGGCCCTGGCGACGAAGTCTTAACGGAGCAGCACCATGGGGCCGATCCCGCAGCGCCGATCGATTGTCCTGCCCTCGCGCCGATTCTATTCATAAACGGCGTTTCTGACATCGGTCGGAAACGCCCCAGCCATGCCTTCGAACGCGGTGTTTGTCAGGGCAACCACCGAGAGGCCGTTCTTACGGTCGATGAACCAGGAATGGCCGCAGGCACCGCCCCATTGCAGCGTGCCAGCGGCCAGCGGTGTGCCCGTCAATGCCGGATCGTCCAGCACCGCCCAGCCATAGCCGAAGCCCCAACCCGGCCCCTGCGTTTGCGCCGTCGCGCCGACCTGATCATGGACTATCAGCCC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA //