Array 1 78114-78343 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXL01000001.1 Consotaella salsifontis strain USBA 369, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 78114 32 100.0 33 ................................ GTGATCCGAGCGGCGCGCGCATCCCGGTATTCT 78179 32 100.0 34 ................................ GCGAGCTGTGATACGAGCGCCGAAGCGCAGTAGT 78245 32 100.0 35 ................................ TCGGTACTTAACGGACAACCCAGGCACCACCTCAT 78312 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 4 32 100.0 34 GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACCGTGTTGGCCGAGATCGCCGCTCAGGTTGGCGA # Right flank : CGACAGCGCGGCGGACGCGGCGGCAGTCAAGGAAAGTCGCCCCCCGTGCGGGGGCGTGGATCGAAACCGTGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGTGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.80,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.15 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], // Array 1 6016-4128 **** Predicted by CRISPRDetect 2.4 *** >NZ_FUXL01000009.1 Consotaella salsifontis strain USBA 369, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6015 32 100.0 35 ................................ CGTCCTTGGGCGCAGGGACGGGAAAACAGCCAAGC 5948 32 100.0 33 ................................ GTACGTCAGCGGCTGCGAAGCGGTCCCAAAGCC 5883 32 100.0 36 ................................ GACTAGACGGGCATACCAGGCCGCCGCGTCTCCTGC 5815 32 100.0 35 ................................ TGGCGTCACAACGAACTGAGCGTTGTTGCCATCGC 5748 32 100.0 34 ................................ ACGTAAAAGAAATAATACTCCGTCCACCAACCGA 5682 32 100.0 33 ................................ AAGGTCCGTTGCGGCGGAGGATCGTGCCGGTGC 5617 32 100.0 34 ................................ ACGAAAAGCTTCGAAGGCTTGGTCTTCGAGGGAG 5551 32 100.0 34 ................................ CGCTCCTCCTTGGGCGGCAGCGCACCCTTCTTCC 5485 32 100.0 34 ................................ TGGATAGACGATGTAATGATCTGCTCAATGTAAT 5419 32 100.0 34 ................................ GGCCAAGGTGCCAGCCGAGCAGCAGGCGGCGACG 5353 32 100.0 33 ................................ ACGAAGATCGAGAACGCCCTGACGCGCTATATC 5288 32 100.0 34 ................................ TCGTCGGCCGGGCGATCGGCGGCATGGTCACGAG 5222 32 100.0 36 ................................ GCCTACAGCCGGGTCGCAGCCTGACGACAAGCAGGC 5154 32 100.0 34 ................................ GCTGGCCGATGCCATCGATGTTCAAAACATCACT 5088 32 100.0 34 ................................ TGCTCCGCGCGGCTCATAACGGCCCCAGCAACGC 5022 32 100.0 33 ................................ TGAGAAAGCCGAATTTGTTGAAGCGAACAAGGC 4957 32 100.0 34 ................................ CATATTTTGATACATGAGGTGTTGCTCGGGCTTG 4891 32 100.0 33 ................................ CGCAGGGCGCATTTTCCATGGTTCGCAAGCCGC 4826 32 100.0 36 ................................ GGGGAGCTTGACGGGAGTCTTGCACTCGGCGGTGAT 4758 32 100.0 36 ................................ CATCCAGTCATTGGCGCCGTTGTCCGCAATATCTAG 4690 32 100.0 36 ................................ GTCAGTACCTAGTGCGTCAAAATCAACACCCTGACG 4622 32 100.0 33 ................................ CAGAGCCCGTCAGGCGCTCGCATCCGCTACCCG 4557 32 100.0 35 ................................ TGCTCAAACGGCGTCGCGATCTCGCCGACAGCGGG 4490 32 100.0 34 ................................ CGAAGACGCGCCGATCAGTGAGACGGCGTTCTGC 4424 32 100.0 34 ................................ ACGGCCTACACCTCATCCGACAACATCGGCACCT 4358 32 93.8 35 ........T..T.................... AGGATATCTGCGCCGCCGGGCGCGCCGTACCCCTG 4291 32 90.6 35 ........T..T...A................ CCAGGCGGCCCGCTCGGTCGTCTGCCCCTCGGCAT 4224 32 93.8 34 ........T..T.................... GTCGCTCGACCGCCAGCACTACCATTTGATCATC 4158 31 87.5 0 ........T..T......-...........C. | ========== ====== ====== ====== ================================ ==================================== ================== 29 32 98.8 34 GTCGCCCCCCGCACGGGGGCGTGGATCGAAAC # Left flank : CGTCCAGAGCCGGCTTCGGGGAATTCGACCGGATCGCCTGCGGCAATCTTACGCATGGCGCCAGCACAAAATCAGCACGAGAGGCAAGTGACGGCGCCTGATGCCGCTGCTTTGCTGGCAGATGGTCTGGGGAACAGGATCGGCGCACGGCCACGGCGCTCAGTTTTGCCCGGCAGGGAGCGCCAAAGGCACCGTGATCGGCGTGAGGAGTGGGCGTCCAAATCGGTTTGGATGCCGATAAGCTCAAGGAGCCAGGTTGGATGACGTTCAGGGCCGCCTGAAGGCGCGGGGGCGGCGCGCGTGCGACCGGCATGGTGTTGCCGCGCGAACCCTAAGCGTGCCGGACATCGCCGGGAGGTTCGCGCTGGGTGTAAGTCGCGGACATCATTGGACAATCCGAAGTAGGGCCTGATCCAGTGGCCGAGGCGGCGCGACCGTCTCGTATCGTTCGCGCAGCCGGGATCATTCCGCCTGGCGTATCAAAGCGCTATTTAAAGGCC # Right flank : CTGCTAGGCCCTCTCTGGCCATTTCAGTGCGTCGTCGCCCTACGAGACGCGCCATGCGCATCGCGGGAAATGGCTTTCCATTCTCTGGGCTGGATGCGCGGAATGCATGGATGTAATCTATGTACGGACAAATAAGCCCAGGGCCCCATGGACCGTATCGATCGCACAGCAGCGACCCCCTATTACCAGCAGCTCGCAGACATTCTGTTGCGTCAGATCAATGAGGGGCGCTACGTCCCCGACGATCGTCTGCCGTCGGAGAGCGAGCTTTGCCGGGAGTTCGACCTATCGCGATCGACCGTGCGCGAAACGCTGCGCAGCCTGCAGGATCAGCGCATCATCAAGATGGTGCCGCGCCGCGGCGCCTTCGTCGCCAAGGGCATCGATCGCGGCTGGATGCTCCAGGTCACCAGCGGCTTTTTCGATTACGAGGCCCACCAGGGAGGCAAGCGGGTGGCCACCAGCGTCATTCGTGCCGCCTTCGAACAGTCGTCCCCTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCGCACGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //