Array 1 12341-13649 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNVX010000023.1 Lactobacillus delbrueckii subsp. lactis strain FAM 1200 FAM1200-i2-1_scf23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12341 28 100.0 33 ............................ TCAGTCGCCTCCGCGATCTGATCGCGTACCTCT 12402 28 100.0 33 ............................ TGGGGCTTCCATCTTAGGGGTTCAGTTGGATGA 12463 28 100.0 33 ............................ TCCGTGTTTTATGGTCAATACCGGCCTTTGGGG 12524 28 100.0 33 ............................ CTTGCGAAAAATAATGCAAGTGTTATAATGTAA 12585 28 100.0 33 ............................ TCAAAAAAAGGAGACTTAAAAATGGAAACTGAA 12646 28 100.0 33 ............................ CAAATGGATCGTCATTGTGGCCATGTTTGAGGA 12707 28 100.0 33 ............................ TGAGGATGTCGTTTTCTACAGTAGTAGCCCACG 12768 28 100.0 33 ............................ TGGTACCGATCAAATCTATAAACAGTTGTATCT 12829 28 100.0 33 ............................ TAACACAATCGTCTTCGTCTCCGATGCTGATCT 12890 28 100.0 33 ............................ CCAAAGCTTGGAAGCTTTAAACACTAGATACAT 12951 28 100.0 33 ............................ CTTACCAAAAAATCGACATCGTAGGCGAACACA 13012 28 100.0 33 ............................ TTAAGCGAGTTCGGATTAGTGAAAATGATCGAT 13073 28 100.0 33 ............................ CCACCTCTTTACTCACGCGTATCACTTCGCCCG 13134 28 100.0 33 ............................ TAATTGCGGTGGGTTAGCAAGTGAGCACTGCCG 13195 28 100.0 33 ............................ TCCCGGACTGCTTCATCCTCAGACGTCCATAAA 13256 28 100.0 33 ............................ TGATATTTTACCGCTAGCCCTTGATCATGTCAA 13317 28 100.0 33 ............................ CTTTTTTTGAAAAATCTATAGCGCCTTGCAAAT 13378 28 100.0 33 ............................ CGATGTTCGAAAGCTATTGTAGTGATCTGCTTG 13439 28 100.0 33 ............................ CGACTGAGCTATATGATGAGTACAGCTCAGACT 13500 28 100.0 33 ............................ TGGTCTTGATCAAGAAAGTCAAGCTGCCACAAA 13561 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 13622 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.3 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : CGTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //