Array 1 50160-44970 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFDM01000002.1 Acinetobacter baumannii strain TG89524 Acinetobacter-spp-TG89524_75, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 50159 28 100.0 32 ............................ TGCTGTAAAGTCGCCTTCATTCTCAGTAGCAC 50099 28 100.0 32 ............................ ACAATCTTTATCGTCTCGAGAGCTAGCAGAGA 50039 28 100.0 32 ............................ ATTTATGAAGCTCGTAGAAATCGACTTTTCCC 49979 28 100.0 32 ............................ AGTAGTAGGAATTGCTTGAGATTGGTTTAATT 49919 28 100.0 32 ............................ TTAATCGGCTGTAGATTTTTATTGATCAGAAT 49859 28 100.0 32 ............................ TTTATGAACTCATAGCATTTCAGAAGGCAAAT 49799 28 100.0 32 ............................ TAATGCACCGCCTGCACCTGACACATCTGAAA 49739 28 100.0 32 ............................ CAAGAGAACCCACCCCAGTTTTTTCGGTAGTT 49679 28 100.0 32 ............................ TTGATGGAAGCTTTTGGGAAATAAATGACCCA 49619 28 100.0 32 ............................ TGAATATGTTAAAAACTTGCCATATTGGCAGA 49559 28 100.0 32 ............................ TAATAAGCCATATGATGTTGATGTAAGCCAGA 49499 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 49439 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 49379 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 49319 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 49259 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 49199 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 49139 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 49079 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 49019 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 48959 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 48899 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 48839 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 48779 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 48719 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 48659 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 48599 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 48539 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 48477 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 48417 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 48357 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 48297 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 48237 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 48177 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 48117 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 48057 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 47997 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 47937 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 47877 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 47817 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 47757 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 47697 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 47637 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 47577 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 47517 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 47457 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 47397 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 47337 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 47277 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 47217 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 47157 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 47097 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 47037 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 46977 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 46917 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 46857 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 46797 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 46737 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 46677 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 46617 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 46557 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 46497 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 46437 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 46377 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 46317 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 46257 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 46197 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 46137 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 46077 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 46017 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 45957 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 45897 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 45837 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 45777 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 45717 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 45657 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 45597 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 45537 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 45477 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 45417 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 45357 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 45297 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 45237 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 45177 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 45117 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 45057 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 44997 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 87 28 94.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 55250-57792 **** Predicted by CRISPRDetect 2.4 *** >NZ_RFDM01000002.1 Acinetobacter baumannii strain TG89524 Acinetobacter-spp-TG89524_75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 55250 28 100.0 32 ............................ AACATCAGGCGTACTTATATCGGGTGTCTTCT 55310 28 100.0 32 ............................ AGTTGTCGTTACCAATAGCGGTAAGGTTTCTC 55370 28 100.0 32 ............................ GCTACTGACATTAGCCAGAAAGTCCAGAATCT 55430 28 100.0 32 ............................ TTGTTGTCATGCAAGTTCTGCAAAAATGCCTT 55490 28 100.0 32 ............................ TCCAGAACTAGCTCACTTAGAACGCAATGCTA 55550 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 55610 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 55670 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 55730 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 55790 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 55850 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 55910 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 55970 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 56030 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 56090 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 56150 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 56210 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 56270 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 56330 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 56390 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 56450 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 56510 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 56570 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 56630 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 56690 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 56750 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 56810 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 56870 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 56930 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 56990 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 57050 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 57110 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 57170 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 57230 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 57290 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 57350 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 57410 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 57470 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 57530 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 57590 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 57645 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 57705 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 57766 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 43 28 98.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //