Array 1 199204-202654 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADFAU010000002.1 Burkholderia gladioli strain BCC1819, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 199204 28 100.0 32 ............................ TGGGCGAGCGCATCAAGCATGTCGGTGGCCGG 199264 28 100.0 32 ............................ GTCGTCAGCGCAGCGCAGAGCGCGTTCGCGGT 199324 28 100.0 32 ............................ GTGCTGCCGCCGCTGATCCGCACCTACCTCGA 199384 28 100.0 32 ............................ TTGAGGTTCGCGTCGTCGTCGCGCTTCGCGAG 199444 28 100.0 32 ............................ TCGCCGGCAAGCTCATCTGCTGGTCTGGCTAC 199504 28 100.0 32 ............................ GCCGCGAGCAAAATGACCGTGACGACGCCGCT 199564 28 100.0 32 ............................ TGGAAGCCCTGGAATACGCCGTGGGGGCAATG 199624 28 100.0 32 ............................ GATGTTCTGGCCTTACGGCCCGCGCTTGATGA 199684 28 100.0 32 ............................ CGTGGACGCTGACGAACGCGTGATCGCGCTGC 199744 28 100.0 32 ............................ CTCGGCATCGACCCGGGCATCACGGGCGCACT 199804 28 100.0 32 ............................ GACGCGTCCGGACTCGACGTCGCCGCGTTCAT 199864 28 100.0 32 ............................ CGCTGCTGGGCTCGTTCGGCGTCTCCGGTCGG 199924 28 100.0 32 ............................ TGTTTGCCCTTGATGCCGCGGTGCAGTCCGGT 199984 28 100.0 32 ............................ ATGCCGACAAGACCATCCTTCCCCTCCACCAG 200044 28 100.0 32 ............................ TCCGCGCCCTTCTCACCTCCCCGCGAGCAGCA 200104 28 100.0 32 ............................ GTCGAGAAATTCACCTTCATAGCTGTCGAGAC 200164 28 100.0 32 ............................ CAGCAGAGCCTCGAAGATCTTCCTGCGCTCCC 200224 28 100.0 32 ............................ TTGCGCAGGCCAGCGAGGATGTCTGGCATTGC 200284 28 100.0 33 ............................ TAGCAAATTACGGAGGCTTCTGATGGCCAGCTC 200345 28 100.0 32 ............................ CTCATCTCTTTGCCCCAATGGGCCTTTCAGGA 200405 28 100.0 32 ............................ TTAAACGTCGCGCCGAGGAAGTCGCCGATATT 200465 28 100.0 32 ............................ GATCACGGCCAGCACGATCCAGAGGGAAAATA 200525 28 100.0 32 ............................ ACTCGAAAGCCAGATGGCTGCCGAGGAAGTCT 200585 28 100.0 32 ............................ GTGTCCGGATCAGTCCAGAACGCCGACACCTC 200645 28 100.0 32 ............................ GCATTGCCTGCGAGGTGCCAGCACGTGATCCA 200705 28 100.0 32 ............................ ATCGTCATCTGCGCGCCACTTCAAGCCGGGTT 200765 28 100.0 32 ............................ CGAGCGCGGGGCCGTCCAGCAGGGGAAACAGG 200825 28 100.0 32 ............................ ATGCCGGACAGGTGCTCCCACTTCGCGCACTC 200885 28 100.0 32 ............................ TCATTGAGTAGCAGGCAGACCCGGTGGTCAGA 200945 28 100.0 32 ............................ GATCGAATTCGGTGAGCTTCCGCCGGACGGCA 201005 28 100.0 32 ............................ ACCCGGACCAGGCCAAGGCGCGCAAGCCGATC 201065 28 100.0 32 ............................ GCTTGGGGCGGTAGGTCTGCCAGGGGCGGTGA 201125 28 100.0 32 ............................ TGGTCATGCAGGAAGTGCGCAACGAGAACGAT 201185 28 100.0 32 ............................ ACGACGACGAGCCGAAATCGTCCATCCACACC 201245 28 96.4 32 ..................T......... TACTTGGACGGCCGGCAACCGCTTTTCTCGCA 201305 28 100.0 32 ............................ GCAGACTCGTGGCGGGATCTGGGGCGTCTACC 201365 28 100.0 32 ............................ TCCCGTATCAGCAGCGAGTGGGCCGCAAGCAC 201425 28 100.0 32 ............................ TGCGCCACGTTCTCGGCTTCCCGAATTTCCGC 201485 28 100.0 32 ............................ TCCTGGCGCGCGGTCCCCCCTCCCCGCCTGCC 201545 28 100.0 32 ............................ TACATCCTCGCATCCGAAGACGGCGCGAGCCT 201605 28 100.0 33 ............................ ACGTCTCGACCATCGATTGCGTGTTCGCTACGA 201666 28 100.0 32 ............................ TGATCGACAGCAGCGAAAGCGGCATCGCACGC 201726 28 100.0 32 ............................ ATTGCACCTTCCGAACCGACTTGCCGACCCAT 201786 28 100.0 32 ............................ TGTGGTAGCCCGAGAGTTCGGCGCTTCTTCAC 201846 28 100.0 32 ............................ GCTCGTGAACATGTCGTCTGCGTGGTATTCGA 201906 28 100.0 32 ............................ AAGCGCGGCACGCTGATCGTCGGAAATGCGGC 201966 28 100.0 32 ............................ AACGGAAGCTGCTCGGTGATTTTGAGGGTGAT 202026 28 100.0 32 ............................ CAGGGAAGTGCACCCGAAAGTGCACCCAGGAA 202086 28 100.0 32 ............................ TTGTGCACCAACTATGTTGCAACCAGCGAAAG 202146 28 100.0 32 ............................ TGCTGATGCGGGAGAGGCGGTGGGGATCGTGG 202206 28 100.0 32 ............................ TGCGATTGCGAGGCGATCGGAGGCGCGTAGAC 202266 28 100.0 32 ............................ CTTGTAGTTGTCGCCGCGAAAGCTCGCGCCGT 202326 28 96.4 32 .......................G.... TCATCAATCGCGGCGCGCATCGCCTCGACTTC 202386 28 96.4 32 ..............G............. ACCAGTCGCGGCCCACAGAAACCAAAATCGCA 202446 28 100.0 32 ............................ AACTGGCCCGAGCATCTTCATGAACCCAGGCC 202506 28 96.4 32 .........T.................. ATACCGCGCGCTCGCTGACCAGGCCGCCACGC 202566 28 100.0 32 ............................ AGTCGATGCAGTCGGCGGCCGTGCGCCACGGC 202626 28 92.9 0 ...........T.C.............. | T [202650] ========== ====== ====== ====== ============================ ================================= ================== 58 28 99.6 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGACGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCTGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTATTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAAAGGGCGGAAATTTGGGTGGTTTGCCCTTTCGCGCGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGCTA # Right flank : ACTGCGATATGAAAGTCCGGCAGACGGGCAAGTTTTGCCTCCGGCGCGCGTGTTTTAAAATCGTAGCGCCAACGGCATCGTCACCGAAGTCGTTGATATGACGGGGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATTCGCGCATGTTCGCACTCGATCGCGGCACAGGCAGCGCCACAAACCAGACACAAGACAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCATCACCTGCCTGCAGGTGACCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACGCCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAATACGGCGATGGCCGTGCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATCCCGCATCCGCGCGACTACGCCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //