Array 1 6764-8596 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDCK01000007.1 Enterobacter roggenkampii strain GN02208 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6764 28 100.0 32 ............................ TGGCTGAAATACGAAAGGAGCAGGAATGAGAC 6824 28 100.0 32 ............................ ATTTCCGGCAACATGTCATGGCTAACCACCAC 6884 28 100.0 32 ............................ AGACGCGGCGCTAAAGTAGTCAGCCACAATGT 6944 28 100.0 32 ............................ TCATGGCCTCTATGAAGCTGGCGGGAAGAGAT 7004 28 100.0 32 ............................ GTTCGTGCTGATTGACCTCAACAAGCAGGAAT 7064 28 100.0 32 ............................ GTGGAGTATTCAATAGCGTAACTGTTTACCTC 7124 28 100.0 32 ............................ ACACGAACGCGGCGATTCAATCAAAGCTGCCT 7184 28 100.0 32 ............................ TCGTCACCCTCCCCGATAAGCTCCAGCATAAG 7244 28 100.0 32 ............................ TCAGCCAGCGCGGTATCAATCTTCCCGGCTTC 7304 28 100.0 32 ............................ TTTACTGTTCGCCCACTTCGCTACCTGCTGGA 7364 28 100.0 32 ............................ TGCACAGCCTGATCTACAAACAGGATGAAGAT 7424 28 100.0 32 ............................ CGAAATGTGACTATAAGAATCACACTCTAAGT 7484 28 100.0 32 ............................ GCAGACCTGTGTCCAATGGGTGAGGGTCACAA 7544 28 100.0 32 ............................ GGTGCAGTCTCTTCGGTCATTGCTTCATCCAT 7604 28 100.0 33 ............................ AGCAGACAAGGATAACCACTGTATGGACGCCAT 7665 28 100.0 33 ............................ CTGTGCTCAGGGCTTGCGACTTTGGGTACTCAG 7726 28 100.0 32 ............................ TAAGCGTGTGGGCGACCTTCCGGCCCGCAAAA 7786 28 100.0 33 ............................ TATACGGTCACCGAACCACAGGAAGACGGCAAT 7847 28 100.0 32 ............................ ACCTTGGCGCAGAAGGCCGCCAGGGTGATAAC 7907 28 100.0 32 ............................ GACACAGGTCTGCGGGCAGCTCCCATATCTCG 7967 28 100.0 33 ............................ AGCTCGGGTAATAGCCTGTTGCCTGATACGTGA 8028 28 100.0 32 ............................ GGACGGAAGACGATGGGGTAGCGTTATCAACG 8088 28 100.0 32 ............................ CGGGATGCCATACGACATTGAAGGCGCAGATC 8148 28 100.0 33 ............................ GACAACCCGCGCCGTTTCATCAGCCAGTTTCAT 8209 28 100.0 32 ............................ AGTTTTGCCGCTGCAATCTCGCTTCTGACCTT 8269 28 100.0 32 ............................ GTGTCCCGCAACTCAATGCGCGAGGTGATTAA 8329 28 100.0 32 ............................ ATTCGCAGATGGTCGTCACCCGCGCTCTCTGG 8389 28 100.0 32 ............................ TCCTGGAGAACCCCCAGGGCAACCAGTCTTTT 8449 28 100.0 32 ............................ CAGCACCAGACGATCGCGAAGCACCAGACCCT 8509 28 96.4 32 A........................... AATAAAAAAGGCCACCCCGAGGGGTAGCCTTT 8569 28 78.6 0 ...............A.....AC.ACT. | ========== ====== ====== ====== ============================ ================================= ================== 31 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAGGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACCGAGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCGAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : AAAAACAACTCTCTAAAACATTCAGCTTACCTATTTAAAACTTAATACGATCAAACCCACATTCTTTATTTTTCGCAATAAATAAAAAATTCATTCACATGCCAATTATATTCCAATGAATATATTGTTCGTAAAGATAATGCATTAAATGGAAAAGTGATTTTTCACTTTATTATCACGGTAATTACTCTTCATTTGATACCCGTCACATTTGTTTTCATCTTATCTTCGATAACATACCGCGCATTCAACACTTTGAAATAAAAGCCCTTGCTATGTCCGTAAACAGCATCACTCCAACAGACTTAAAAACCATCCTGCATTCAAAACGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGTGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATACCACGGCAGTGATGCTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 18094-19623 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDCK01000007.1 Enterobacter roggenkampii strain GN02208 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18094 28 100.0 32 ............................ ATGCCGTCCCAACCCCCGCCACCGGGCGGGAA 18154 28 100.0 32 ............................ GGGAAGACTGCCGCCGCTACGAGCTGCACCGG 18214 28 100.0 32 ............................ TCGTCGAGCTGTCAAACGTGCCCTTTAAGCAG 18274 28 100.0 32 ............................ TGTTACGCGCCGGACAGCCAAAGAAGGGAACC 18334 28 100.0 32 ............................ ACAACATAGCTCGGTCTCCGGTAGGGAGGCAT 18394 28 100.0 32 ............................ TGACCGGATGGGGAGAGCAGACGACAGGAAAC 18454 28 100.0 33 ............................ CATTGTTATAGCTCCCATACCACCAGCCATCTT 18515 28 100.0 32 ............................ CGAACGAGCAACAGCTCATTGCACAATGCACC 18575 28 100.0 32 ............................ TGACTTCATCACCATCTGGCATCACTTCTGGC 18635 28 100.0 32 ............................ AAACAACTCTACGGGGATACGGCAGACTGGCA 18695 28 100.0 32 ............................ TGGGACTTCAGAATCATCTGCTGTTCCAGTTT 18755 28 100.0 32 ............................ CGGGAAAACTGGCGCGGCTACCAGGTTCACAA 18815 28 100.0 32 ............................ TTTTTCGGCACTCAGCCAGAGGCCAAAGAGCA 18875 28 100.0 32 ............................ GTTTACCCGCTTTCATGTTGCGAACTGCAACA 18935 28 100.0 32 ............................ TGGTCGTTTACACCTGCCGCTTTCAGCTCTCC 18995 28 100.0 32 ............................ GTGAGGAATAAACCGCAGAGAGCTTTTTGGCT 19055 28 100.0 32 ............................ AGGTGACGAACGCCACTAACGATATGCGCTCT 19115 28 100.0 32 ............................ TGCCGGATGTTCGATAGATGGGACGTGGAAAT 19175 28 100.0 32 ............................ AAACGACATTACAGAGGGCCTATTCCTCGTAA 19235 28 100.0 33 ............................ AGCAAGCCAGCGCACGTAGGCTCTGACCAAACT 19296 28 100.0 32 ............................ TTACCGTTATCGCCGATAATATGAATAGCGGC 19356 28 100.0 32 ............................ TGAACGGATTCGAGCCGGACGTACGCATTCTG 19416 28 100.0 32 ............................ CACCACCCGGGAGCGTAACCCCAGAAAACAGG 19476 28 100.0 32 ............................ AGGGAAATGGACAACCATCACCACAGGATGAA 19536 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [19561] 19596 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 26 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGTTCGCTCTCGTCAGGCGTTAACGTCCGGCCCGCGCTTTTTCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACGCTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTGATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGAGGGGGATTAATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGGTTGTGTAATTTATTGATTTTAAAAGAGTATTCTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTAAGCTTTTTTTTGTATGCAAATCAGAAGGGGGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGATTAACCCGACCTTTTAAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAGACAACA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //