Array 1 1803-39 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSCV01000024.1 Methylocaldum sp. 14B contig00024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1802 37 100.0 35 ..................................... TTCGCCAATTCCTTCGAGCTGCGGGAAAATAAGCG 1730 37 100.0 36 ..................................... TCCAAATCAATTTTGAATGCTTAGTGTTTAAGTGCT 1657 37 100.0 37 ..................................... TCAAGACCCGCTGCGGTTCGCCTACGGGTTCGGCCTG 1583 37 100.0 34 ..................................... CCGCGTAATCAGTGTACACGGCCAGTCCAATCAT 1512 37 100.0 34 ..................................... TCGAGCCGGTCGGCGAGATCGTCGCGTACAGCGG 1441 37 100.0 36 ..................................... CGGCTTTGCGGTATCGACGAGTCACCCTGGGAAGAT 1368 37 100.0 36 ..................................... ATCGGAGATTACACCGCGCGGGCGTTCGAGTGGCGC 1295 37 100.0 34 ..................................... AACAATCAAGTCGGAGTGGTGGAACTTTACGGAC 1224 37 100.0 34 ..................................... TGGACGATCACTATTTATCTACACCAGGTCTCAG 1153 37 100.0 35 ..................................... TGAAATCGACGCTCAGAACCTGTTCGGCAACATCG 1081 37 100.0 35 ..................................... GCTGTGCCTCGGCTATGGGCCTATGTCGATTGGCG 1009 37 100.0 34 ..................................... ACTGGACGGAAAACAGTTCACGAACCCGGATTTC 938 37 100.0 35 ..................................... CGCTCAACGTCCTGGGCTACCGCGTCCCGAACGGA 866 37 100.0 35 ..................................... CCGTCACGGCATGGATTCCGACGAACACCGTGATG 794 37 100.0 37 ..................................... TTCTCAGGGATAATCGAACGCTGTTGTAATATCGAAA 720 37 100.0 34 ..................................... AATCGGAACGACGACGGAGACATAGCAATCAACG 649 37 100.0 33 ..................................... TGGATATGCTTGTTTGTATAACTCCATCCTCGA 579 37 100.0 37 ..................................... TACAGAAAACTATCGCCTCGCGAGCTTGAAGCGCGAG 505 37 100.0 35 ..................................... ATCCTGCCGCTGCATAAGAATCCGCTGGCAATACT 433 37 100.0 35 ..................................... TTGTTCCAAAAAACCGTTGGAACCAGTCCATACGA 361 37 100.0 34 ..................................... ACGGAGATGGCGCGGTGGCTCCGGATTCCTCCGC 290 37 100.0 35 ..................................... TTCTCGGCTAGTTCCTTCTGCATTACAGCGCTATC 218 37 100.0 35 ..................................... CCGCTTAATGCGTTTCTCGTGTAACTCCAAAATGC 146 37 100.0 34 ..................................... CAATTCGCCGTCACGTAATGCGTCATGAAATCGT 75 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 25 37 100.0 35 GTATCTCCCGGCTTAATAGCCGGGAGTGGATTGAAAC # Left flank : CTGAACCGCTGAGGTAAACATGTTGCTTCTGGTCAGTTACGACGTCTCGACCGAAACCTCGGAAGGCCGCCGACGGCTCCGGCGAGTCGCCAAGGTCTGCCTCAACTACGGTCAGCGTGTGCAAAAATCGGTGTTCGAGTGCAAGGTCGAGCCGATGCAACTGGAAATCTTGAAGAACGACCTGCTGGACATCATCAATGAAGAGGAAGACAGCTTGCGGATTTACCGCATCGTAGAGCCGCTTGAAAAAAACGTCATGGAATTCGGCAAGTTCAAGGCGGTCGACTTTACGGATACCTTGATCGTATGAGTGCTCTGCCGATGCGCGAACTGGAAGCAATGGCAAAATGCCGGGACATTCGCGCAGACCATAAACTTATGACTTTATTCCCTTTCGTTGCCAAGAATTCAAAATTTCTTCCGGCTTTGACACTCCCGGTCCTCCCGTTCGCGCTTTCCTGCCGTTTTTTCCTGATTTATTCTTGCTTTGCCGAAAGGCT # Right flank : CATGATTGCCCATTTAATTTTATGGGCAGAAGCGCGCGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCTCCCGGCTTAATAGCCGGGAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-15.30,-15.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 42606-45748 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSCV01000045.1 Methylocaldum sp. 14B contig00045, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 42606 29 100.0 32 ............................. ACGGCGTAATGGTAATTGTTAGCCGACAAGTT 42667 29 100.0 32 ............................. CCGCGCAATACGGCGGTTTCGCCGTGGCACTC 42728 29 100.0 32 ............................. GCCGCGCCCGCAACCGGGCGACGCCCCCTACT 42789 29 100.0 32 ............................. GCGGCAGATGCTCGGCCTCGCGCGGGGTAAAG 42850 29 100.0 33 ............................. GCAGACAGGCGCATTCTCGAAAGCGAAACCCGC 42912 29 100.0 32 ............................. TGATGGGCGCCGTCGCCCGCGAGTACGGATTC 42973 29 100.0 32 ............................. CGCCGCCGATCGGCACGATAAATTGGATCATC 43034 29 100.0 33 ............................. GCGCTCGCTCTCGGGCTCAGGAAAAGCGCCGAA 43096 29 100.0 32 ............................. GCAGAGCATTTCACCTGATGGAACCGGAGGAT 43157 29 100.0 32 ............................. ACCTTCATGCAGATCGAGATCGCCCGGCTCGT 43218 29 100.0 32 ............................. AACCCGGTCGAACTCGCCGCCATTCTCGGCTA 43279 29 100.0 32 ............................. TCCTCCAGCTGGTACATCACTTCGAGGATCGT 43340 29 100.0 32 ............................. CGCGGCCGCGCCGCAGAACGGCTCGACATAGC 43401 29 100.0 32 ............................. CGCCCGACCTTCAACCCGATCTCTTCGGTGCG 43462 29 100.0 32 ............................. CCTATATCGACGCCCGACGCCCGGTCACGGCG 43523 29 100.0 33 ............................. TCCAGGCCGCGCGCCTCCAGCTTGCGGCGGCCG 43585 29 100.0 32 ............................. GTCTGATTGTTTTGGCATCAGACCTGAGCGGC 43646 29 100.0 32 ............................. TGCGAAGTGGCCGGACAACTAGGCGAGAGACA 43707 29 100.0 32 ............................. CGCTCGGAATCCGGCACCGCGCCTGTTATCAA 43768 29 100.0 32 ............................. CCCTGCAATCCTGGGGCAACGAACTGCTCGAA 43829 29 100.0 32 ............................. GCTCTCCAGATCCTCGCCGCTCATCTCCCGCG 43890 29 100.0 32 ............................. CTTACTCTTTTATCCATGATCGAAATTTCCAC 43951 29 100.0 32 ............................. TCGGTCAAAGGCTTCACGATCGTCCGCCCAGC 44012 29 100.0 32 ............................. CCTATGCTGAGCTGGACCGCGAGATCGCCTTG 44073 29 100.0 32 ............................. ACCAACCGCTTAAAAACCGTAGGCATGAAGGA 44134 29 100.0 32 ............................. GACTCGGCGAAGTCGAGGCACTCGCGCCGCGC 44195 29 100.0 32 ............................. TCCGGTTACCTCCAGATCCGCGGCGAAACCAA 44256 29 96.6 32 ............................C CGGCTCCAGGAGCAGGCGTCATGAGACAGGTC 44317 29 100.0 32 ............................. ATCGCCGAGCGCCTGAACGGCAGACGATTCCC 44378 29 100.0 32 ............................. ATCCGCGTAGAGAGCAAGGAAGAGATTTTCAA 44439 29 100.0 32 ............................. CGGAAGGAGGGTTCGAAACAGACCGGCAAAGA 44500 29 100.0 32 ............................. ATCAGCGCGGTGACCGTGACCGATTCGACCGC 44561 29 100.0 32 ............................. TGGAGCAACTGGCCATGGACAGAGGTTGCACC 44622 29 100.0 32 ............................. GTATCAAGGTCTGCGCCGAATGGGAAAATTCA 44683 29 100.0 32 ............................. TACCTATCGGGCAGCAAGACACATAAGTTCCT 44744 29 100.0 32 ............................. CGACATCCTTAACAATTGCCCCGAAGCCCGAC 44805 29 100.0 32 ............................. CGTCGCCGTGATCCAGGCCGATGCGGCCATAC 44866 29 100.0 32 ............................. CGCTCTACTGGAAGACACCAGCTCGTATGCGG 44927 29 100.0 32 ............................. TCCGAAAGCAGCTCGCCATTGTCGACGACTGC 44988 29 96.6 32 ............................C GATCATGCTACGGCCGACGGCGAGCTATGCGC 45049 29 100.0 32 ............................. CAAATTGAAATGTTCATCGAGGAAAGCCTGTT 45110 29 100.0 32 ............................. TCGTTTGATGTTTTGTGAAACAGTTGGGCCTG 45171 29 100.0 32 ............................. GCCGGTCTGGCGTCTCGGATCGCAACACCCGA 45232 29 100.0 32 ............................. GTGCTCCGCGCACTGGCCGCCGCCCCGAATCC 45293 29 100.0 32 ............................. CTGACCTTGCGGCGATGGCGGACGGCTACGAT 45354 29 100.0 32 ............................. GTTGATGGTCCCCGATTCGGTTGCGGGGCCGG 45415 29 100.0 32 ............................. GCCGAATGCCTGGACCTGCCGCGCAAAACCTT 45476 29 100.0 32 ............................. GGTTTTCGCGCCGGTTGACCCGCTGAGCCAGC 45537 29 100.0 32 ............................. CCGCTGTACGACGAGATCCACAAGACCAGAAA 45598 29 100.0 32 ............................. ACTTACCGACGCTTCTTGACTTACGGCTCCGA 45659 29 100.0 32 ............................. AGGTTGGGTCGTCGTCGGTCGGGTAGCCGAGG 45720 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 52 29 99.9 32 CTGTTCCCCACGTACGTGGGGATGAACCG # Left flank : GCCATCGAAGACGTGCTCGCCGCGGGCGGCCTGGAACCGCCGGAAACCCCGGAAGACGCCGTCGGCCCCGCCATCCCCAACCCCAAGAGTCTCGGCGATGCTGGTCATCGTGGTTGAAAACGTTCCGCCCCGGCTGCGCGGCCGTTTGGGCGTGTGGCTGGTGGAAGTGCGCGCCGGCGTTTACGTCGGCGATTTGTCGAAGCGCGTGCGCGAAATGCTCTGGGCGCAAGTCGAAGCCGGCCTCGGAGACGGCAACGCCGTGATGGTATGGTCCACCAATACGGAATCGGGCTTCGACTTCGTAACCCTCGGCAAGAACCGGCGCATGCCGGTCGAATTGGACGGCCTGAAACTGGTGTCCTTCTATCCGCCCGAACCGGCCGACGGGGAGGGAAATAATGCTCTTTAACAACCCGGATTTTTCATTTTCAAAGCGGCGAATCGCCGGTAGAATTTCGACCGGTATTTTTTGCCAGTCCTAACAATAGGTTAGAAATGGT # Right flank : GGAGTCGGAGTAGCGCCCGGCCCGCGCCACCTCTGTTCCCCACGTACGTGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCACGTACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1052-42 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSCV01000051.1 Methylocaldum sp. 14B contig00051, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 1051 35 100.0 35 ................................... ATATCAGCAGATTTGCGTCGATGCTACGTCCCTGC 981 35 100.0 34 ................................... AAGCACTCTCTAAGGCAAGACCGAGCCGATAAAG 912 35 100.0 34 ................................... TGGTGACGCAAGTCGTGTCGGTTCAAGTCCGACC 843 35 100.0 37 ................................... ACGAAACCGTTACCAGTCCAGAGGCACGTTTTTTTTG 771 35 100.0 35 ................................... CTTCATCGCACCCTTCGCTAGATACACATACATCT 701 35 100.0 34 ................................... GTATATCTCCTGTAGTGAAGGTGTAAGAAAAAAC 632 35 100.0 35 ................................... TGCCTGGACCAGGTCGTTAACGTCAGACTGGCCAA 562 35 100.0 35 ................................... TCAGCTTCATCCAAAGCTTGATGTTTCTTGATTTC 492 35 100.0 34 ................................... GTGGGACCCGGCGGCGGCGAGCAGCGCTGTTTCC 423 35 100.0 34 ................................... AGTTGGCGGGAAATGGTGAGCATGATTTCCTTAC 354 35 100.0 34 ................................... TTATCGAAATAACCGGCGACTGACTTGTTGTCGT 285 35 100.0 35 ................................... GTATGCTCTGGGGCGGCATGCTGCCCGTTTGGGGT 215 35 100.0 35 ................................... CCATAATTATGAAGGCAGAGGTGGCTAAAGCGAGA 145 35 100.0 34 ................................... CAAGATCCAGACAATCGACCCTCCGACAACCAAC 76 35 97.1 0 ....................A.............. | ========== ====== ====== ====== =================================== ===================================== ================== 15 35 99.8 35 GTGCTTTTGAGAGAGGCCGCGAAGGCCGTTGAGAC # Left flank : TTCTATCTCGTGTGCTACGACATCGCCGACGAGCGGATTCGCGAGCGGGCCGCAGATATCCTTCTGCGCTACGGGGAACGGGTTCAGGAGTCGGTGTACGAGGTATGGCTGCGGGACGGGCGGACCCTGGCAGAACTCCGCGACGAGCTGTCCGAAGTGCTGGGCGAGGAGCGGCAACTCAGGTTCTACCGGCTGTGCGGACGCTGCCGGCGGGATTCGGAAAGCCTGGACGGCTTGCCCGTCGCCAGCCTTCCGGCGGCGATCATTCTTTGATACCGTGCGGAACCCGGTAAATTGAGAATCACCGTGTGGAATCAGCCACTTGAATCGGAAATTCTGAAAAAATCCGGGCAAATCGCCGCCGATATTTCAAAATCAACGGCTTATGCTGATTTTGCAGCCGTTTTTGGGGTGGAGCGGCGATTTTCAAGGCACGATCTTGACCCTTCCGCCGAATCGGCTATGCTGGGCCGCGGCGGATGGGGGGTTCGGAAGGCGCC # Right flank : CGTAATTACAAAGAGCGGCATAGGAATGGCTTGTTTAACGTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTTTTGAGAGAGGCCGCGAAGGCCGTTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.10,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 21185-22272 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSCV01000049.1 Methylocaldum sp. 14B contig00049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 21185 36 100.0 33 .................................... TCTTCCGTGCTGCCGCGCGGGTGCTGGTCGTGG 21254 36 100.0 35 .................................... TCAAAAGAAAACGCGGTTAAAAGACTTAAGCTTGT 21325 36 100.0 33 .................................... CACGTGGTCATTTCAAACCAAGCTATCAGCGTG 21394 36 100.0 34 .................................... TACCACTGTAAAACCTATGGGATTGGCATGGCTT 21464 36 100.0 35 .................................... ATTAATCCTTAATCAGGCCTGCCTTACGGCAGGCC 21535 36 100.0 34 .................................... TTTCATATCATGCCTCTGTTGTTATTAAATCTCG 21605 36 100.0 33 .................................... GCATCCACCCGGCGAGCTCGGCGAGAAATCCGG 21674 36 100.0 36 .................................... TCCAGTCCCATATTCTAGCCGCGTCTATCGCGTTCC 21746 36 100.0 32 .................................... CCACGTACTAACTAGAGTTCCAGAGACACAAG 21814 36 100.0 35 .................................... ACTTCCGTCCAGAGTATCTTTGATGCTTCCGTTGT 21885 36 100.0 35 .................................... GCGTTGACGTTGACGCTATGAATCAGCAGACCAAA 21956 36 100.0 35 .................................... GGCGGGGCATAGGGGCAGGCGGCAGCATCTCCCAA 22027 36 100.0 34 .................................... CTTTAGCGCGGGGCGATTCGCCGCGCCACCAGAC 22097 36 100.0 34 .................................... GGGTCAGGTTTTTGTCAGTCATCGTTTTATCTCC 22167 36 100.0 33 .................................... CTGCAATTCCTTTGCAGCACGAATTACCAAATC 22236 36 91.7 0 ................................T.CA | A [22266] ========== ====== ====== ====== ==================================== ==================================== ================== 16 36 99.5 34 GTTTGAATCGAGACCTTATGAAGAAGGGATTAAGAC # Left flank : AGTCCGGCCACCGACAAACGTTCCCGGCTCCAAGGCGAGATTTTGAACCTGCTGAGGCAACATCTTCCCCACGGACGGGTATTGTCCGAGTGCAGCGTACAAACCGCCGAGGGCGTAAAAGTGGCCGACGCGGTTTGGGCCAGCGCGGAGTTTTTCGCCCACCGCGGTTTGGCCAATCCTTCCCCGGAAGCCCCTGAAATCGTGGTCGAAGTGCTTTCGCCGTCAAACGGCCGGGCCGAAACGGAGGAAAAGAAGGAACTTTATTTCGCCCGTGGCGTGCGCGCATTCTGGGTGTGCCGGGAAGACGGCGAAATGCTGTTCTACAACAACCACGCCCGGCTCGAACACAGCACCCTGGCGCCCGAATTTCCGACCCGTGTCGAGTTGCCCGCATGACGCTCCGAAAATCGCAATCACTCGACGCTAACTTTTCGGTAAGCCGATTTTTCTGCAAACCCCTTTGTAAACCATTGACTTTGGAGGTGTTTTAGACACGAGCC # Right flank : AAACGATGAAAACCACGATTAAAAGAGCAATCATAAGCTCTTTCCAATAACCATTCTTTTTAACCATGACAACTTACTTCGTTACCCGCCATGCGGGCGCCATCGAATGGGCGCGCGAAAGCGGCATCGCGGTGGATCGACAATTGGCGCACATGGACATGGCCGTGGTGAAAGCCGGGGATCGGGTCATCGGCACCCTGCCCGTCCATTTGGCCGCGGAGGTATGTGCCCGAGGCGCCCGCTATCTTCATCTGGCGCTCGAAATACCCCCGGATTGGCGGGGACGCGAGTTGTCGGCTCAGGATCTTAGGCGTTTCGGCGCCCGCATCGTGGAATACCGCGTCATCGCGGCTGAAGGCGAAAACCCATGAGCGCACGTGTCCTGGTCATCCCGCGAGCCGAGTGTCCATCTTTACCGGAGGCTGATGCCTGGGCGCGAACCACCTGGACGTGGCCCCGGAACTGGTCATGGCGGCGTCGCTCGGAGGCCGAGGGCGACG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATCGAGACCTTATGAAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 26619-27075 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSCV01000049.1 Methylocaldum sp. 14B contig00049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 26619 37 100.0 33 ..................................... TGGTCTCCACTTACGGTTGTTGTTGGGGTGGTG 26689 37 100.0 33 ..................................... ATATTGCGTTTGGGAATGTTCGCGTTCTTCTTT 26759 37 100.0 33 ..................................... CCTTGGGCTATGCCCGTCCGTGGGCAGGAAAGT 26829 37 100.0 32 ..................................... TTGGCTCCTTTGCGGTTTCTGGTAGCGGCATC 26898 37 97.3 36 C.................................... CATCGTCATATCTCCGTAGGTTCTGCCCGTCCGTGG 26971 37 100.0 31 ..................................... TTCCTGCTAGCGCTTGCGTTGGACATCCCTA 27039 37 97.3 0 A.................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 99.2 33 GGTTTGAATCGAGACCTTATGAAGAAGGGATTAAGAC # Left flank : ATGGCTGGAACAGTACGCGTACAGTCTGGTCCAGAGCCTGAAAAGCGAACTCAAAGCGATACAGGACATCGGCCGAGGGCTGGAAGTCGAGCGGCAAAACGGCGCCGAGCGGATTCGCAATGAACTGGACGTTGCCTTTCTCGCGGAAAACCGGCTGTACATCGTCGAGTGCAAAACCCGCCAGTTCAGGGACGATATCGAGACCGGCGGTGCGGGCGCCGATGCAATCTATCGGCTCGACGCGCTTTCCAACCTCCTGGGCGGTCTCCAGGCAAAGGCCATGCTGGTCAGTTATCAGCCCCTGTCCACCGCCATTCAAGATCGCGCCCGCGCCTATGGGATACTGACCTGCGCCGGACCGGAATTGAAAACCTTGAAGGAAACCTTACGCCGATGGATAGGTTGAACCGCCCGGTACCGAATGCTAACTTTTCGGCAAGCCGATTTTTCTGCAACCCCCTTTGTAAACCATTGACTTTGGAGGTGTTTTAGACACGAGC # Right flank : CTTTTGTCGGTTCCGGGACCGGGAAGCTCGGCATGAACGGCTAGGTTCGCGACAGATGCGCTTCCCTTCGGTCAGCACATCCTACAAACGGATGGGCCGGGCGAAGAGTTGTCGAGCTGCGGAGGGTCCTTCGCCCTTTTGGTGGATTGCGGAAACCGGGATGTCGTAGGGTGGGTTAGGCGCATTCCGGCGCCGGCTGGCCATCGATCGCCGCGCTTCACATGCGCCGTAACCCACCAACGCTCGGCAACCTTGCCGCTCGCTTCGGCGGGTTGCATGCCTTGAGCGGAAGCGCGCCTAATTCACCCAGCACGGATATATGGGCTTCTAACGGGTTGCGCTGGTCACCTCGCCTGCCGCAAACGATCGTTTTAACCTAAAAACGGCAGTTAGACCGTACAAAATCCCGTTCACCCTTCTATACATCAGAACGTAGGTCGGCAATCTCTTCCCAATCGCAAACGGTCGCTTTAGTCGCGACCCTTCCAACAAAGCCCTTC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTGAATCGAGACCTTATGAAGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //