Array 1 11139-14802 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTI010000015.1 Synechocystis sp. FACHB-929 contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 11139 37 100.0 35 ..................................... GATTGTTGTGCCCCTGGCGGTCGCTTTCAATGCCT 11211 37 100.0 37 ..................................... TAATCCTAATTAGGTTTGAGTTAGTATCTAGTGCCAT 11285 37 100.0 33 ..................................... ACAGATTTTGCTTCAGCTAGTACCAAAGGCTAG 11355 37 100.0 37 ..................................... TCGTAACTACCTTCTAAGTCTGTAGCGATGAATGTGG 11429 37 100.0 37 ..................................... CAAAATATAGGGAAGAATTTTAGAAAGAACCTCAGAA 11503 37 100.0 39 ..................................... AACTAAGGCATCCCATAGCATTCCGCTACGATCTATCAG 11579 37 100.0 35 ..................................... TAATAATTGCTGATTAATCGTGGTGGTGGTGGTGG 11651 37 100.0 36 ..................................... GATATATGGCTAAATATTGCTCAAAAGATTTTAATA 11724 37 100.0 35 ..................................... ATTAGATTGGTCGTGTTTTGATTAACGGTGCTAGC 11796 37 100.0 35 ..................................... TTGCCATCCCAGGCAACATAGCAAGCATGGAGGTG 11868 37 100.0 35 ..................................... TTGCCATCCCAGGCAACATAGCAAGCATGGAGGTG 11940 37 100.0 35 ..................................... TTGCCATCCCAGGCAACATAGCAAGCATGGAGGTG 12012 37 100.0 36 ..................................... TTGCGGACAGACTCGATTAAGTCAATAACAGCTTGG 12085 37 100.0 36 ..................................... CTTGCCCTAATTTTCCTGGTGGAAAAGCCGCTGGCT 12158 37 100.0 35 ..................................... ATAGCAAGTTGCTAGAGAAAGCGCAACAAAACAAG 12230 37 100.0 34 ..................................... GAGGTTAAATTGTTGTCGATTCAAGAAGACTTGA 12301 37 100.0 36 ..................................... AATAGACACGAATTCCGGTTCCAGACCCAGCCCGTT 12374 37 100.0 35 ..................................... TTCTTCCATCAGTCCAAGTTCTTCAACAATGTCTA 12446 37 100.0 35 ..................................... TGCTGAAGAAGCTGGAGAGAATCGGGCATCGCTAT 12518 37 100.0 35 ..................................... ATTCCAGATGTGGTGGAAGAAACCTACGCCCCCGA 12590 37 100.0 32 ..................................... AATCAGCTTCCGGCGTTGCCATTTGGATTCAA 12659 37 100.0 34 ..................................... GTGAGGGGGCCAGATCCCTGCCAGATCCCCCAAT 12730 37 100.0 35 ..................................... ATTAGATCTTTGGCATAAGGCAACCGAAACTGATC 12802 37 100.0 35 ..................................... GATTATCGTGCTTCCTTCGATGCTAACTTTGCTCT 12874 37 100.0 35 ..................................... TCCATAATGATTCTGCCTCGTTTCTACTTGGTTTA 12946 37 100.0 37 ..................................... TGTATGTCACGCCATCGGACAGGTAGGGAAAGCCTGG 13020 37 100.0 38 ..................................... CAACTGGCTAAGCTGGTCATAAGGCTTTGGGAATGAAA 13095 37 100.0 34 ..................................... TCGGGTTTCCCTCCTGGGTAATGACGCCTACGGG 13166 37 100.0 34 ..................................... CAAAGCTGGCACGGAAGCCCTTAAGGATATCCTC 13237 37 100.0 37 ..................................... GATGCAGAGATTCCACCACCAAAGGAGAATCCGATAA 13311 37 100.0 37 ..................................... AAAGATTGGGACTTTTAACTGCAAAATACCAGGCTAG 13385 37 100.0 41 ..................................... ATTTGTTGGGCCATCCTGCCCTGTCCATTGAGGTTAAGCGG 13463 37 100.0 37 ..................................... AAAGATTGGGACTTTTAACTGCAAAATACCAGGCTAG 13537 37 100.0 41 ..................................... ATTTGTTGGGCCATCCTGCCCTGTCCATTGAGGTTAAGCGG 13615 37 100.0 35 ..................................... AAGTAAGGTTCAAACGCCGCTACGCAGTCTGGTCC 13687 37 100.0 33 ..................................... CAAAGTTGGAACGAAAGCTAACGACAAAAACTA 13757 37 100.0 38 ..................................... TTTAGCCATCGTCGGATTCTAATCGATCCAAAAGTCGG 13832 37 100.0 37 ..................................... AATCCTACCAAGCGGCTTTTGGTGGGCCTGGCTCCGA 13906 37 100.0 36 ..................................... TTCGGTTGATTGATGAAGATCTGATCGTCGAGTGGT 13979 37 100.0 34 ..................................... TCCCTTTTCGGGGATAGGTGGTGTCCCTTTTCGG 14050 37 100.0 35 ..................................... ACTACCAGGGGGAAATTGATGGTATTCCCGGCAAA 14122 37 100.0 35 ..................................... ACTACCAGGGGGAAATTGATGGTATTCCCGGCAAA 14194 37 100.0 36 ..................................... GGGCAATGTTAAGCATGGCTAGAAGGAATAGTTAAC 14267 37 100.0 33 ..................................... TTCCATTAATGATTCTTCAAAAATCACTCGATT 14337 37 100.0 36 ..................................... ACTGTTACTAGCCACCGCCCAACTCCTTTAATACTT 14410 37 100.0 37 ..................................... TCTTCTGTTACGTAGATTTTTCCTGTTTCGCCAACAG 14484 37 100.0 37 ..................................... CATCGCTCCCAGCATATTGTCCTGAACGGTCGGCAAT 14558 37 100.0 34 ..................................... GATTTTTCCAGTGATGGTGCATACCTAGCCGTAG 14629 37 100.0 32 ..................................... TAGTCCCTCCCACACTGCCAATATTTCTTCAT 14698 37 100.0 31 ..................................... TCCGTCTGTATGACTTATACTCGCAAGGATT 14766 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 51 37 100.0 36 CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC # Left flank : AAAATGCTTTATTTGATTATTTATGATGTCCCGGCTACAAAGGCGGGTAATAAACGACGAACTCGTTTGTTTGATCTCTTATCGGGCTATGGCAAATGGCGACAGTTCAGTGTGTTTGAGTGTTTTTTGTCAGTCAAGCAGTTTGCTAAGTTACAAACGGCGATGGAGAAGTTGATTAAACTTGATGAGGATGCAGTTTGTATTTATGTGTTGGATGAAAATACGGTGCAACGCACGATTACCTACGGGACTCCCCAACCAGAAAAACCTGGTAGTATTATTATCTAAGAAGTCATTCTTCAAATTTTGGCATACCTATAGCGAGGGCCTTTTCCCTGGGGGGGTTGCCAAATTGCTTCTGAACCTTGAAAAATCAATACTTTCACGCATTCAGACTGCGTACTATTTTGAAGGTCTGGCTGATTTTGGAAAGATATTCTGGAAGGTTTGCCAAAGTCTGCTTTCCTCCACTTTCCCCGTAAGGGGTCGGAGGGGGCGGT # Right flank : CACGCCGCCAGCCCACCAGCGCCAGTTAACATCATCTCCAAGTCTAAACTGAACCCCACCAGTAGCGCTAAAAACAGCTATTTGAGAATCAGCCATGATTGTTTTCCCCGGTTGCAGTTTTTAGTTTAGAGCTTTCTCCCCTGTCCACTTTTTCGGGGCCACCTTACAGCCCTGGTAATAGGATTTGCTTCTCACTGCCATCACTATTGATGGGACACTCCACTCACGTAGTTACAGAAACCTCCCTTGTTAGGAGACCACTGCCATATATTTTGCTTTTTATCAAACGAAATTACTGCTTATATTTTTTGACTCTAAAACAGCAGTCACTGGCACAATTAGATTAGGTTTATTGTTATATTCCTATGCCTAAACTTAAAAAGCTTACTCCCAAGGCCGAAGCCCAATCTGAGTCCACCAGTCTAGACCGTCTAAGGGAACTGGCCCAAGACCCCAAACTGGCCAAGCTAGTAGCGGCTAATTATATGGCCCCACCGGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : I-D [Matched known repeat from this family], // Array 2 63322-67601 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTI010000015.1 Synechocystis sp. FACHB-929 contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 63322 37 100.0 36 ..................................... TGTAGTAGAACCAATCGGGGTCGTCAATAACTCCCG 63395 37 100.0 40 ..................................... CGGGGCTTGGGGGGTTGGAGTCCCCGCCCCCGTGGTGGGA 63472 37 100.0 42 ..................................... TGTGAGTTGCATAATGCCTCCTAATGGCTGTTGGACTCATAA 63551 37 100.0 36 ..................................... CTTGGTATTTGTAGTTCTCGATGAGTGTTTTAGGCA 63624 37 100.0 36 ..................................... TGATAACGGGATGCCAGCCCTAAAGGTGATGAGCGG 63697 37 100.0 39 ..................................... CGTTATCCGGCAAAGAAACCACACTACTAAGCTCGACAA 63773 37 100.0 39 ..................................... TGGGCCGGGCGCGAGTTGTCCTCCTGTCCGAGGCCCCAC 63849 37 100.0 39 ..................................... CGTTATCCGGCAAAGAAACCACACTACTAAGCTCGACAA 63925 37 100.0 39 ..................................... TGGGCCGGGCGCGAGTTGTCCTCCTGTCCGAGGCCCCAC 64001 37 100.0 35 ..................................... CTATTAAGGCTATTTTCGCCACTTCTGTTTGAAAG 64073 37 100.0 44 ..................................... GTCACACCTCTTCACGAATCCTCACATCATGAATAAGCTGCACA 64154 37 100.0 39 ..................................... CGCGGGTCGAGATGTCGCTGGACACGCTGGTGCCGGACA 64230 37 100.0 38 ..................................... CTGGGCGGACTGGAGTTGCCACCTGCCGATGGCCTGCA 64305 37 100.0 41 ..................................... GAGCCAAAGTCAACTAGCACAGGCACGGCAAGCCATCCTGA 64383 37 100.0 38 ..................................... TCGTGCATCTGCGCATAGGAAGAGGTTAATTCCTCAAC 64458 37 100.0 38 ..................................... AACGGGCAGCCCGAGTGGTGGGCATCGAGGTGGTGCTC 64533 37 100.0 40 ..................................... CCCCGCCACATTTTCGGATTAGAGGATTTGAATCGGCCGT 64610 37 100.0 42 ..................................... AGTTTCTCAAACTTTTCGGCGATCGCCGTCCAGGTGAGTTGA 64689 37 100.0 43 ..................................... TAGCGAAAAGTTATAGTTACCTTTGACCGGAGCTACCAACTCA 64769 37 100.0 35 ..................................... CCCCGCTGCCACGAGGGCAGCTGTAGACGCACCCC 64841 37 100.0 40 ..................................... TTAAATATACCCATCCCTAATAAAGGATAGAGATCTTGCA 64918 37 100.0 37 ..................................... GCTCTATTCTAATAACCCAAGCTTTTTTCAATTCTAA 64992 37 100.0 41 ..................................... CCGCTTGGTAGGATTGACCACCAAAGCTAGAAACAGGCACA 65070 37 100.0 35 ..................................... AGGGCGGTTAATCACTAGCGGCGATCTAGATATTG 65142 37 100.0 45 ..................................... TAGACTTCTATTTCCCCTCTTGCCGAGGGATGATACTGCAATTGA 65224 37 100.0 38 ..................................... TGCGCTCTCTTATCAAACGCCGCAACGCCATCAAGGCT 65299 37 100.0 39 ..................................... ACGAGCGGAATCTTCTATGGATCGGATCACATCCTTAAT 65375 37 100.0 37 ..................................... CTGGTGTCGGGGTTGTAGTATTCGTCTCGGTACAACA 65449 37 100.0 40 ..................................... ACTATAGGGAGCGTTACCCTAGCTAGACATTGCCTAATCT 65526 37 100.0 40 ..................................... AAGAAGCAGAATAATGCGATTGAGTGGACAAAAATAAGAA 65603 37 100.0 34 ..................................... GGTTACGTATCGGCGTAACCGCCACTCCTTAGAG 65674 37 100.0 39 ..................................... CGCCTCCTGCGCCCTGGAGGGGTGATCCTACACCTCGCG 65750 37 100.0 36 ..................................... GATTCTGGTATACGTTTATCCCACCACTCCTTAGCT 65823 37 100.0 35 ..................................... CTCGTAAGCTAGGCAACGGCCTTGCTCGATGCACA 65895 37 100.0 36 ..................................... GGTGCAGCTGCGCCTAAGGAGATGGCTGTACAAGCT 65968 37 100.0 39 ..................................... CACCTAGAGGGTACCTCCCGGTTAGACCGGGGCTCTTAT 66044 37 100.0 36 ..................................... AACATGGCCACAACAACCTTCCCGGAGCAAGGGATG 66117 37 100.0 40 ..................................... GGCGATATTTGGCGTGCCAGCCAAGTGAATTTTGGCGCTG 66194 37 100.0 36 ..................................... AACATGGCCACAACAACCTTCCCGGAGCAAGGGATG 66267 37 100.0 40 ..................................... GGCGATATTTGGCGTGCCAGCCAAGTGAATTTTGGCGCTG 66344 37 100.0 40 ..................................... CTAGCCTTTGTGGCTAACCCTCCTGCGCTTTGACATATAG 66421 37 100.0 35 ..................................... TTTTACCTCTTGCTCCTGCACAAGCTCAGCCTTAA 66493 37 100.0 36 ..................................... TCCTCCTCGCCTCTGAGAAAGAGTATGAAACACTGT 66566 37 100.0 37 ..................................... ATGAACAGATTGCCATCTTCTAGGCGGATAGCCTGGG 66640 37 100.0 40 ..................................... CGCCCATTGTTTGTGCTTCCGGAAGAAGTCTTTCAACTTC 66717 37 100.0 43 ..................................... GTTATCACGAGTTATCTTGCGCAAATCTTGTAGTGCATCTTTT 66797 37 100.0 37 ..................................... TTTAGCGGAGGAGACCTCTTCTATTTCTCCTATAACC 66871 37 100.0 41 ..................................... GGGAGAACCCTAAAAAGTTCTCCTGTCTAATCGCCACCTGT 66949 37 100.0 35 ..................................... CGCTCCAGAGTGCGCCGCCGCCGAATTGCGGTCCA 67021 37 100.0 45 ..................................... GAGACTCTATCTTTGGAGTTTCTAAGACATTGGCGGTTTCTAGGG 67103 37 100.0 41 ..................................... ATTGCTTGGCGTAGGTTGACTTACCCGAGCCTGGGAGACCA 67181 37 100.0 40 ..................................... TCCAAGGGCTCTTCGTCTTCAAAGGCCTTAGTTACCTCTG 67258 37 100.0 45 ..................................... ATAATAAAGCACCCTCAACGGACTATGCCATGAACAACAGGACCC 67340 37 100.0 34 ..................................... GTTGCCAGTTTTGCCGTTTTTGCTGTTCTGAGAT 67411 37 100.0 46 ..................................... CCCATAATAATTAGGCTCGCTACCATAAGGGGAAACTTCTTCCAAG 67494 37 100.0 34 ..................................... GCGCCTGAGGTGGTCAATAGTGACCCCATGGCTC 67565 37 97.3 0 .......................T............. | ========== ====== ====== ====== ===================================== ============================================== ================== 57 37 100.0 39 GTTCAACACCCTCTTTTCCCCGTCAGGGGACTGAAAC # Left flank : CCCAGTGGGGGAACGGTGCTGACACACCCAACCCGCGACTGGGTTTATTTATGTTAGTTTACCCTTTCTATGGGTTCAAAATGTGTCTATCCCGACAAAATTAGGGCTATTACAACAACTCGTTGACACTGGCCATAAGTCTCAAACCCTTGTCGTGTCAGCGTTTGCTCGAAGTAAAAAATAAAACTCGTGGACACTACCATAGACAATATTTGCTTCTGTAATTGCTTCCCAAATCAGATCAAGTTTTGTTAAGCACTTGACGATTTTCAGCGGACGTTGTAGCAGTGAGCCTGACTTTGTCTGACGGAGCTTATGTAAAGTTTTATGGATTAATGCTTGCTTTCAGCAAATTTAGGTATTACTATGACCTTTATAGCCAAAAATAAGGCTTTTTATTGTTATGTTTTCAGTACGTAACAAATCGTTAAACGTCTACCTCTTGTTTGGCGGATTGGCACCTCGAAAACCGCATACAGACTGTTTTTCAGTGTGATAGG # Right flank : CGATCAGCAAAAGTATCTCAATTGCTGACAGTGTCATAAACCTGAACAAGAGTCATTCCACGTCCAGAAATATTAAGCATTTCGTTGTTCAATTTTTTTACTACTTGCCGTAAGCCCAACCATTGATAATATCAATCAACTCATTGGACCAAGGGTTAGGATTGCGGTCTTGATAAATTTGCCAAAGAGACTGATAGTACCAAATAATGCCAGATTTGCTCCGACTGAACTTTTGCCAAATATCATTCCCATAGCGGTGTAGGTCGATCTCAATAGTGCGGGCATTATGGAGAGTATCCGCCAAAGAAATTTTCAGCACAGCGAGGGAAATGCGAGACATTTTTTGTAAATGCTGTTGTTTTCTCTCTTCCCAGGGCGGTTTCGGCACTGTGGAGCTATCGGAACACCCCAACACTAATTGAGCTACGGTTTCCCCAAACTTTTCCCGAATTACATTGAGAGTGGCTTCTCCCCCTTGGTCCTCCACCGCATCATGGAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAACACCCTCTTTTCCCCGTCAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCAACACCCTCTTTTCCCCGTCAGGGGACTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 3 84928-86517 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJTI010000015.1 Synechocystis sp. FACHB-929 contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================== ================== 84928 36 100.0 36 .................................... CTTTAGGTGGGCGTTGACCTTTAGATTAGGAATGGT 85000 36 100.0 36 .................................... AGCGCCACAGCTGACAGAGTTCCTGAAGGAAGCTAA 85072 36 100.0 35 .................................... CTGAGTGATTTTTATCAATTGTCGAGCTTAGTAGT 85143 36 100.0 36 .................................... ACAGGAGTGTTAGCGCACTGCCTGTCATTACTATTA 85215 36 100.0 39 .................................... TTAGATTGCGGGGGCTAGTGACGCCATAGTTTAACGACA 85290 36 100.0 36 .................................... AAAGATATTAGGCTATCCTTCGGGGTAGTCTTTCTT 85362 36 100.0 35 .................................... AAGTGTTGTTGCCTAGTGTTATACCAGAATATCCC 85433 36 100.0 37 .................................... CTCATTAGTGCTATCTTCTTGTTGATGGATTAGAACA 85506 36 100.0 37 .................................... TCTACTCTGGTGAAGACCAAGTGGATTTCGTGGTGAT 85579 36 100.0 36 .................................... GTTAGTGCTTGGTTGTGGTTATGCTGCAACTAAGCC 85651 36 100.0 37 .................................... ATCGATATACTTTTTAGCATCAGCTAAATGATAAAAA 85724 36 100.0 35 .................................... TTAGAAAGTTTTGGTTAGTTTCCATTCCTCTTTTT 85795 36 100.0 39 .................................... ACCAAGCTAGTCACTATCCGATCAACCGTCGTTGCAGGT 85870 36 100.0 42 .................................... TATCAAGAGTTGTCTAGTCAGTTCCAAGAAAAACCCTGGGAG 85948 36 100.0 41 .................................... TGACCTGATTCCTCGAGAATTGAGACTCCTAAAGAAATTGC 86025 36 100.0 35 .................................... AGTTCCAGTCGTGCTCCAAGGGCTCTTCGTCTTCA 86096 36 100.0 47 .................................... AACTTTGGAAAATTGCCTTCATACCATTCTTTTGTTAAACCGTTGTT 86179 36 97.2 37 ...........C........................ AGCAACAAAACAGCCAGCAGCAATTAATAAATCAGTT 86252 36 100.0 39 .................................... ACTCCGTGGCGTCGTACCGGTACGCCTGGGCTTCGTCCA 86327 36 100.0 43 .................................... TGAAATAACCCCCATAGCGGTGGCCATGGGGGCGTTTTACTAA 86406 36 100.0 40 .................................... ATATCTGTTAGCTCAATTTGAGCAAGTTCATCATTTTTTA 86482 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================================== ================== 22 36 99.9 38 GTCTCCACTCGTAGGAGAAATTAATTGATTGGAAAC # Left flank : TTAATTCGCTAATTGATGTTTCTCTATGTTATTGCCTACGATATTCCTGATGATCGCCGTCGTAAAAAGATGGCCGATTTATTAGAAGGTTATGGCCAAAGGGTGCAATATTCTGTATTTGAATGTACATTGTCTAAGTCTAAGTTTAATGAATTGCAAAAACGTCTCCGCAAAATTTATCAATCAGAGGAAGATAGTTTGCGTTTTTATCCTTTGTCTGGGCATACCCTCACCCAGGTTGATATTTGGGGGGAACCACCACTCACTAAGCCCCCTGGCTCAGTCATTGTCTAAAATCTATGCTGATTATTGGTGTACCATTGCGAGGCTGATGGAAAATCGCTGTAATGTCCGTTTTTCGTTGGGAGCCTCGATGGCTTACTGTATAAGGATTTCAGCCGCTATTTTTGCGTTGAGCTTTTCCGATTATGGTCAATTTTTGCTGAGCCTCGCAAATGAGGATTGGATGCCTTGTCCCGTAAGGCTTTAAAATGGGGGCA # Right flank : CTAGCTACGATAACAATTAGTATTACAAAAATATGAATTGAATTAATAATTTAGCCTACGGGAAAATAGGTTTTCTACTGCCATGCTAAAAAATAGATGTTGAGTTAAGTCATCCACCATGCAACTAAAACACTGGCAATCTCAAAAACAGGAGCAAAAAAAGAGTCCAGGGGCTCCCAAAAAAGTGCGGCGACAAAAAGCCCGCCTGCAAGCCCTACGAAAAAAGCTCCATTCTTCCTGGGCTGGAAACCAGCCATAATAATTCGTTCACCAGAACTCGCAATTTTTCACGGAGAAGCCGACAAACATGAATAGTATTTTCACCATTAACCCCTATTGGACCGGAAGCACCTGGGCGTTTGATGCGGCCGAAGTGGGTCTATTAGGGGAACCCTTTGTTTCCGGAGCTGACGCCATTTTGAGCGCCATTGTCAAGCGGGAACTGGCATTGGAGACAGAACAAGGCAGTCAATTCGAGCTAATCTTCAGTGCCGAAGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACTCGTAGGAGAAATTAATTGATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTCTCCACTCGTAGGAGAAATTAATTGATTGGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.40,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //