Array 1 1256658-1256366 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJA01000001.1 Clostridium botulinum strain BrDuraAf Cbot0050oBrDuraAf_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1256657 30 100.0 35 .............................. TAATTTACGTCATGTGTTTTGTAAGAGTTTAGCAG 1256592 30 100.0 35 .............................. GTGGATATGAAATTACCTTATCATTTGTTGGATGT 1256527 30 100.0 34 .............................. GATTATATTAAAAGATTTAAGTACCTATATAGGC 1256463 30 100.0 38 .............................. GACAGTATAACTTTTGATTCTTATTATAATTTAAAAGT 1256395 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 98.7 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : AATCTATTATGTCATATGTTAGTTGAACAGTAACATAAGATGTATTTAAATTATAACTAATTCAGAGTATAATCTCTTACAAATCGTTGAACAGTAACATAAGATGTATTTAAATTTATAACCGCTTGAGAATGTGGCTATCTTGAATGGAATGTTGAATAGTAACATAAGATGTATTTAAATGAAGAAATGAAACAAGCGGCCATAAGTGCTTTAGGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AGAGAACCCAAATCTACGATTTGGTGTGAATCGCTTACTCTTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTAGGGATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAATCATAAATAAATTTAATTTTAAAAACCTGTCTATTTTTAGGTCAGGTTTTTAGTATTTAAAGGGAATAGATAAAATAGTTTTTTGTAGTTATGTAAATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAATTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAA # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 1257660-1256911 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWJA01000001.1 Clostridium botulinum strain BrDuraAf Cbot0050oBrDuraAf_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1257659 30 100.0 36 .............................. AGCCCCATTGCTATTTGTGCAGCATTAATGTTCCCA 1257593 30 100.0 35 .............................. GCTACATTGACCTTAAATGTTCTATTTGCATATTC 1257528 30 100.0 36 .............................. TACTCAAAGTGATGACTCTTTTAGGTCGTATAAGTT 1257462 30 100.0 34 .............................. TACATTTTCATAAATCCAGTCGCCACTTTATTAG 1257398 30 100.0 34 .............................. TAAAATGATAGAAACCTATATTCATTCCTACTGC 1257334 30 100.0 36 .............................. AGCTTAATAAATCTTGTATTTCTAACATCTCAATTT 1257268 30 100.0 36 .............................. GTTTTTCCACAACCTGTTTGGCCACTTACTAAAACA 1257202 30 100.0 36 .............................. TACTTGATGTGTAATAATCTATTATGTCATATGTTA 1257136 30 100.0 34 .............................. TATAACTAATTCAGAGTATAATCTCTTACAAATC 1257072 30 100.0 38 .............................. TTATAACCGCTTGAGAATGTGGCTATCTTGAATGGAAT 1257004 30 96.7 34 ......T....................... GAAGAAATGAAACAAGCGGCCATAAGTGCTTTAG 1256940 30 86.7 0 ........A......G............GC | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 98.6 35 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : GATAACTAGTTTAGAAATAAAAAGATTATGTTTTAAAATTAATTTAACAATATAAATTACAACAAAACTTTTTATGGTTAATTCTAGCATATCCAATACCACCCCCTATTTATAAGTGAAAGACTCACCAATATCCTAGGAGGATAAAATATTCAAAACCCCCGTAGCCATCCACTACGGAATTACTATCCTAACTTGGATATTATATCATAATTATCTATACTAAAAACAGAGGAATTAAATGGTAAATAACATTTTAGTTTAGAATACTACGTTTATTTTAGGATAAAAATAACAAATAATTATATAGAATACGCTAATATTTTTCCAACCAACTTTAGCTTACAAACCTATCTTAGCTCTTGAAATATAAGGCTTAAGGTAGGCTTTTCTTATATATTTATAAAATATTATAATCGGTTGGAAAACTTTCTTTAAAACCTTGTAAAATCAAAGGCTATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATTAATTTACGTCATGTGTTTTGTAAGAGTTTAGCAGGTTGAACCTTAACATAGGATGTATTTAAATGTGGATATGAAATTACCTTATCATTTGTTGGATGTGTTGAACCTTAACATAGGATGTATTTAAATGATTATATTAAAAGATTTAAGTACCTATATAGGCGTTGAACCTTAACATAGGATGTATTTAAATGACAGTATAACTTTTGATTCTTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //