Array 1 183789-182605 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCAN01000026.1 Streptomyces hygroscopicus subsp. hygroscopicus strain NBRC 100766, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 183788 28 100.0 33 ............................ GGTTACCCACAGACTTGCTCACCGCGTTCGGAC 183727 28 100.0 33 ............................ GGGTCAGAGACGGCGCCGGTCCGGAGCGAGCGC 183666 28 100.0 33 ............................ GTGCACCCGGATCGTGCACACCCCCTCATGGGC 183605 28 100.0 32 ............................ CGGCACCACGGTCACCCAGATGTACAGCACCA 183545 28 100.0 33 ............................ CCCCCCTCCCCCGCCGAGCTGCTGGGCCTGCTC 183484 28 100.0 33 ............................ GCTGCGCCGCCGGGAGGAGCGGCTCGCCCGGCT 183423 28 100.0 33 ............................ CCGTCCGTCCGCCGCCCCGTACGCTGTGATCTA 183362 28 100.0 33 ............................ GGGCGACACGCTCTCCTCGATCGCCAGCGCGCA 183301 28 100.0 33 ............................ CCAGCGCGACACCGAGACGGTCGTGAACATCGC 183240 28 100.0 33 ............................ GCTGCGCCGCCGGGAGGAGCGGCTCGCCCGGCT 183179 28 100.0 33 ............................ TCCCCCTTCGTCATCAGCGGCACAGACCGACTC 183118 28 100.0 33 ............................ TTGATGCTAGATGCGCTGATCGCGATCGGGGAG 183057 28 100.0 33 ............................ GGGGTTCCCGGGCTACGTGAACGGCGTGCAGCG 182996 28 100.0 33 ............................ CGGGTTCGTGAAGCCGAAGTCGACGCCCCAGAT 182935 28 100.0 33 ............................ CTGCCGGGCCTGATCGTGTCGGGGCTGGCTGCG 182874 28 100.0 33 ............................ GAACGACGACGAGGTCCTCGAGACCAAGTACGG 182813 28 100.0 33 ............................ GAACGACGACGAGGTCCTCGAGACCAAGTACGG 182752 28 100.0 33 ............................ GGTGGTGACGGGCAGCGCGATGCCGATGGCGAT 182691 28 85.7 31 ...........G.............CCG CACATTTAATAACCCGTGATCGCAAACGCCT 182632 28 92.9 0 ...........G.........C...... | ========== ====== ====== ====== ============================ ================================= ================== 20 28 98.9 33 GTCGGCCCCGCACCAGCGGGGGTGGTTC # Left flank : GACCGCACGTACCGCCTCGGCCCCCTTCGGCCATAATCGCTGAAAGGCTGGCGTCGCCTTCCCGCAATCGTGCACCCCACACAGCCAAGCGAAAAACCCGCGCCCCCGGCCCTCTCCCCCCGCAACATCGTCCAACACACCTTTGACAGACGGCGCCAGAAACCCGTCCCACATGCACTCAGCAACCGCCGCCGTATCCAGAAGATGCGACAGAAGGAGATTCTTCCTCCCACCCGCCTTCTCCTCGGACTTCCCCCAAAGCACCCCAAGGGCTGCCAAAACATCCAGGCCATCGCCAGACAAGGAACGCCCCACCACATCTCCCTCTCTGCTCCGTAAGCTAGTCGGGCACCCTAGCCCCCACCACTGACAGCACCCCCGAAATGACCACCAGAGCCCGCTCCCACCACCTCACCGACACAGACTCCGCCATCATGTGCGTCAGAATCGAACTAACTCAAAACAACCCTGATCACGGATAGAATCCCAGGCCAGCAAGT # Right flank : GAGGGTCCCGGGTCCGCGCGGCCATCCCGGGTGTCGACCCGACCTCGACTCCGTACCGGCCCATCTGGCTGCCGCGGCCCGGGCGTATCTGCGTCAGAAGTTCATGACGGTCCCGGTGGCCGTCTCCGGCGCCAACTTCGGCATCGCCGAGACCGGCACCCTGTCGGTGGTCGAGTCAGAGGGCAACGGCCGCATGTGTCTGACGATGCCCGACACCCTGATCACCGTCATGGGCATCGAGAAGGTGCTGCCGCGTTACCAGGATCTGGAAGTCTTCCTGCAGCTGCTGCCGCGCTCCTCGACCGGTGAGCGGATGAACCTGTACACCTCGATGTGGACCGGCGTGCCCCCGGGCGACGACCCGCAGGCGTTCCACTTGGTGCTCCTCGACAACGGGCGCACCGCGGCGCTCGCGCGTCGCCCCTGCTCCCGCGCGGGCGACCAAGGGCGGCTGAACCGCCGGGGGCGCGCCACGGGCCGGTCACCTCGCCGAACGCGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCAGCGGGGGTGGTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGGCCCCGCACCTGCGGGGATGGTCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.90,-13.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 197827-194019 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCAN01000026.1 Streptomyces hygroscopicus subsp. hygroscopicus strain NBRC 100766, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 197826 29 100.0 32 ............................. GTCGCGCGGACGTCGGCCAAGGGGTCGAGGCC 197765 29 96.6 32 ............................A GAAGCAGCGGGCCAAGAAGAGGGCCGCGCGCA 197704 29 96.6 32 ............................G ACCACCGAACCCGAGCGGGCCCCCCGCCTGCT 197643 29 96.6 32 ............................T CCACGTCGGGGAGCTTCCAACGACAAGACGAG 197582 29 100.0 32 ............................. CGGGCAGGCTGGATTTCGGGCGCCGGCCGTCA 197521 29 100.0 32 ............................. GGAGAGGGCGGCCGGCTCGCCACAGCCGTCGA 197460 29 96.6 32 ............................G CGGAACACCCTGCACCTCGCCATCCACCACGT 197399 29 100.0 32 ............................. GTGACCGAGGACAGGCCCTGGAGCACGAGCCA 197338 29 100.0 32 ............................. GGGATATTCGACCGGGTCAGCACCCCGTTGTA 197277 29 96.6 32 ............................T TGACGCCTCCCAGCGGTCCTCCGCGCGATGTG 197216 29 96.6 32 ............................G TGGCCGGCCAACTTCACCGAGCCTGACATGTA 197155 29 96.6 32 ............................G TGCCCGCGGGACTTGCAAGGCAGCCACGAGAG 197094 29 96.6 32 ............................A CAGGGAGCCGCCGCGTGACGGAATCAGGGCTC 197033 29 100.0 32 ............................. GGACCCGCGTGAGGCCGCGACGCTGCTGCGCC 196972 29 100.0 32 ............................. GCCTTCAGCCGCTCAGCGGCCTCCTCGGCCGC 196911 29 96.6 32 ............................G GCAAGGCTGTCGATCTTCCAGCGGTATGGCAT 196850 29 96.6 32 ............................G AGGGCCGCCAGGTCCTCCGTCGCGGCGGCCAT 196789 29 96.6 32 ............................G CCCGGCTCTCCATCCAGGGCATCTCCGGCTCC 196728 29 96.6 32 ............................G CGGGAGCGTGGCGGTCTGGTCGGCGTCCAGCA 196667 29 96.6 32 ............................G CCCGGCTCTCCATCCAGGGCATCTCCGGCTCC 196606 29 100.0 32 ............................. GCGTACAGCGAGGTCCGCGACACGTCGATCAG 196545 29 100.0 32 ............................. CAGCAGGTCAGAGCACTACCACCCGGGTTCTG 196484 29 96.6 32 ............................T GCATGCACGCCTTCAGCGCATTCAGGCGCGCA 196423 29 100.0 32 ............................. TTCACGCGTCCGACCCCGAGCGGTATCCCGAA 196362 29 96.6 32 ............................T TGCCTCTTGCACTGTGGAGGCCGCCCAGTCCA 196301 29 100.0 32 ............................. GGTGGTGACACCCGCCGCCGTCTTCACGGTGC 196240 29 100.0 32 ............................. AACGCGCAGCTTCTCCTTCGCGGCGAGCCGTT 196179 29 100.0 32 ............................. CCGGAGGTGTTCCGGTCGGAGGCGGAGGGCGG 196118 29 96.6 32 ............................G AGCTGTGGTCCGAGGCCCGCAGCGTGGGCTTC 196057 29 100.0 32 ............................. GGCGGGTGCTCCAACGCTTCTCCCCTGAGCGG 195996 29 96.6 32 ............................G ACCGCACCATGGGCGAGTTCATGTGGCTCGAC 195935 29 96.6 32 ............................T GCCTGCATCAGCAGCATGCCCCATATCGCCGC 195874 29 96.6 32 ....................A........ GTCATCCGGACGTGCTGGGTGATGGGCGACAC 195813 29 96.6 32 ............................G CGCCCCCGGATCTACTGCTCGGAGGCGTGCAA 195752 29 100.0 32 ............................. TCCACCCAGCCGATCTCGGCGGCCGGGTGGTC 195691 29 96.6 32 ............................G TCCGTGAGCTGGCGCCCGCTGGTGATGCGGAC 195630 29 100.0 32 ............................. CTGTGGATGCGGTCGGCGAGCTCGCGCCGCTT 195569 29 100.0 32 ............................. TCCCGGGACAACCCCCGGCGGGGCTCTCTGCG 195508 29 96.6 32 ............................G GGGCCTGGGCTCTGCCCGGTGGCCACGTCGAC 195447 29 100.0 32 ............................. GGCGGGTGCTCCAACGCTTCCCCCCTGAGCGG 195386 29 96.6 32 ............................G CGCGACGAGGAGGTTGTGTCGAGTCTGCCCAC 195325 29 96.6 32 ............................G GGTTGTACGGCTCTCAGGGGTGCCTCCACGGG 195264 29 96.6 32 ............................G ACCGCACCATGGGCGAGTTCATGTGGCTCGAC 195203 29 96.6 32 ............................T GCCTGCATCAGCAGCATGCCCCATATCGCCGC 195142 29 96.6 32 ....................A........ CGGGCCAGCCAGTACGGCCCCTTCTGCGCCCG 195081 29 96.6 30 ............................G ACGAGGTTCCGCATGGGGATGCACTCGAAG 195022 29 96.6 32 ............................G CCGTACGTCCAACAGGCCCGCCGGTCGGGCGT 194961 28 96.6 32 .....-....................... GGCAGCATCGCGTCCTTCGGCGCGGTCCGACG 194901 29 100.0 32 ............................. ACGGCGGTGGCCGTCGGTCTCCTCGATGAGCC 194840 29 100.0 32 ............................. CCGCCCTTGAGTCGCTCGCTCCGCGCCAACTC 194779 29 100.0 32 ............................. TGTTCAGCAGGCCATTTTCGGCCCTGCTCGAC 194718 29 93.1 32 ......T.....................T TGATCACCGCGCTGTACGAGGAGGACGGCACG 194657 29 96.6 32 ............................T CGGGATGAGCTTCTGGCGGGTCTGCGGGAGGC 194596 29 93.1 34 ....................C.......G GCGTTCGGCAACCCCACCCCCGACCCCACGCGGT 194533 28 93.1 32 .....-......................G CCGTAGAGCCCGCAGGTAGGCCCCCACGACCA 194473 29 96.6 32 ............................G TTCACCACGACCGGCGGGGACATGAGGTGGCG 194412 29 93.1 32 .....................A......G GTGGGCGGCGCAGCGGACCGCATGGGTGACTC 194351 29 82.8 30 ......................GTTC.A. GGGGTCCGTACCGGAATTGGCCGCCACAGT 194292 29 89.7 32 ................T....A......G CCGAGGCGTAGGGCTCTGCCGGACCGGCTTAT 194231 29 100.0 32 ............................. CACAGGCCCCGCGCTTCGAGCTCGCGGATCTC 194170 29 93.1 32 ....................A.......T GTCGGCCTGCTGCGTGGTAGTGGGCGGCTTGT 194109 29 93.1 32 .................C..........G CCGACGCGGCCACCGTCACCCGCTGGTCCAAG 194048 29 96.6 0 .........................G... | G [194022] ========== ====== ====== ====== ============================= ================================== ================== 63 29 97.1 32 GTCGGCCCCGCGCCAGCGGGGGTGGTTCC # Left flank : CGGACAGCTTCATCGCGGGGCTGCGGGGTATGGAGTGCCTACATCCCGGCACTCCTCGACCAGCACATACAACTTTCCCGGCCAGCAGTTGTACATCACCCACCAGCTGCACCACGGCATCGCCAACGCCCGACCGCTACACCCATTGCCCACGCCGATCGACGATCGCGACACGTTAACCCACCGCGACATACGCCGCCACCGCGACCACCGCGGCAGCATCCTTCACGAATACCAACGTGCAGCACTACTTACACAGATGAGCTATTCGGCAGGGAACAGAGCCACCGATTGCCAGCATGGGAGCGACCGGTCACCCCGCTGCTCCGGCCTCCCCCGCAATGCACTTCGCGCTAGACCTCACCTCTGAGATCATCTCCAACATGACCACGAGACCTCGTCCTCACCACCGCGCTAGACGGCCCGCTGGCGCTGCTCACGCCAACCTCCAACTGAATGAAAACGGCGTTGACCGGGAGTAGAGTCCCAGGTCAGCAAGT # Right flank : GGCAACAGTGTGGGGGGCCTTGAGGGGGCCGACGCCGTCGTGATCTCGAGGGCTGCGGTTCGATGGTGGACTTTGCCGTGTATACGAGCGTCTCGCGGCCAGGGTCGACAGATCCCGTTGAAACCCCAGGGTCACAGGGTCAGTCAGTGGATAGGTCAGACCCGCCGGGAGACGCTCCTGAATATCCTCCCTGTCAGTCGGGCAAGGCAGGCGCAGGCCGGCGCTCCGCAGGTGCATGCCGACGACCTACTGGTCTCAATCCCCGGCTGTCGGTGTTAGCGTCGGTTGCGGGCTGACAGCAGCAGGCCGTCGTAGTCGACGGGCCTCCAGCGGTCACGGCCCGCGGTGCGGACAGCCCAGCCCTGTTCGTTGGATGCGGGTTCGACGAGGACTGCTTGGCCGTCGCCGATGCGGGTGGCGAGGGTTTCCCAGAGGCGGTCGCGGATGCGGCGGCTGGGGTTGCCGACGAAGACTCCGGCGTTGACTTCGACCAGCCAGCG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCAGCGGGGGTGGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [25-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 204752-201920 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCAN01000026.1 Streptomyces hygroscopicus subsp. hygroscopicus strain NBRC 100766, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 204751 29 100.0 32 ............................. ACCTTGCGCGGCAGGTGCGGCGCATCCTGGAG 204690 29 96.6 32 ............................C ACGATCGTCCCGGCCGTGAACAGGTGGGCCAG 204629 29 100.0 32 ............................. TGATGCTGAGAGAAGACCGGAGGGAGTGCCGG 204568 29 96.6 32 ............................C CGCCGAGACGCCGAGCACACCACACACGCCCA 204507 29 100.0 32 ............................. CACCGCTCGCTCCTGGTGGACGCGGACGGGGA 204446 29 96.6 32 ............................C ATTTGAGTTCCTCTCAGTTGTAGTGGCGCCGC 204385 29 96.6 32 ............................A TCATCGCCGACAACATCCGGGTGGGCACAGTG 204324 29 96.6 32 ............................T GCGACTGTGGCTGATGTCTGGCCGGGTACGGT 204263 29 100.0 32 ............................. TGGTCCGGATTATGTGTGAGCGCGATGACCCC 204202 29 96.6 32 ............................T CTCCCCTCGCAGGAGACCAGCCAGGACGAGGA 204141 29 96.6 32 ............................C CGCGGCCGAGCACCAGGACCACGACCACCACC 204080 29 96.6 32 ............................C AGGTAGCGGCTGAACTGCTGGGCGTCCTCGGG 204019 29 100.0 32 ............................. CCCGGTGGGGCCTTCCGCGTATTTGGATCAAG 203958 29 96.6 32 ............................A CAGTCCTGTCACCCGGCTGCAACCGGACCAGG 203897 29 96.6 32 ............................T CTGCTGCGGGTCGAACTCCCGGACCATGGGAC 203836 29 96.6 32 ............................T GGTGGTCAGCGGCGAACGCGGCCAGAGCGGAG 203775 29 100.0 32 ............................. CCGCCTCCAGGACTCTGTGCGCCCGGCTCGCG 203714 29 100.0 32 ............................. AGATCCCCGCCGTCGGGAGCGTCCGGCATGTC 203653 29 96.6 32 ............................C CCCTGCCGGTCGCCAAGGACCTCCCGGATCTC 203592 29 96.6 32 ............................C CCATGCTGTGGGCACTGCACGACAGCCCCGTC 203531 29 96.6 32 ............................C TCCCGGCCGTCCTCGACCGAGGGCGTTACTGA 203470 29 100.0 32 ............................. TAGTTGTGCTTCTCTCCGCCCACGGGCGGCAT 203409 29 96.6 32 ............................C GCCACCTCCAGCGGGTAACGCGGTTGCCCCAT 203348 29 96.6 32 ............................T CAGCGCCGCCAGGAGGGGCGGAGCGGTAGTGA 203287 29 96.6 32 ............................C AGGTCAGCCCTGAGAACGACCCGGAGTTGCTG 203226 29 96.6 32 ............................T CGAACACCGGTACGCCTGCACGCTCCCGATTC 203165 29 96.6 32 ............................C CTCAGCCCGCGGCTGGGGGACGGCGGTGACGG 203104 29 96.6 32 ............................C GGGCCGCCCCTTGGCGTCCCCGCCCGTCGGTC 203043 29 96.6 32 ............................T ATGGAGCCGCCACCCGGTGGAGGAGGGGGGAT 202982 29 100.0 32 ............................. CTCTACGCCGACCGGCACCGCATCGAGATCAC 202921 29 100.0 32 ............................. AGGCGGAGACCCTGAACAGGATCGGGCTCAGG 202860 29 100.0 32 ............................. CCGCACACCCTCGCCGAGCTGCTCTCCAGGTG 202799 29 100.0 32 ............................. ACCAGGCCAGCGGCGGTTAGACCTGTTGGGGG 202738 29 100.0 32 ............................. CGCCCCGCCCTGCACGGCGAGACGTCGTGCCC 202677 29 96.6 32 ............................C CGCCCCGCCCTGCACGGCGAGACGTCGTGCCC 202616 29 100.0 32 ............................. GCCAGCGAGCACCGGGCCCGCCTCGACCGGCC 202555 29 100.0 32 ............................. CGTGGACAATGGGTGTCCACGGCTTAGGGTTG 202494 29 96.6 32 ............................T GCAGAACCTCAGCCACCGCCATCCCAGCACCT 202433 29 96.6 32 ............................C TTCGGAGCACAGGCGTACTTGCAGGTGATGTC 202372 29 100.0 32 ............................. TGCCGCATGTTCGGTTCGACGTCCACCCGAAC 202311 29 96.6 32 ............................C ACGATCAGCCTCTGGGAGCGGGAGGCCCGATA 202250 29 96.6 32 ............................C AGGCCCTGAACGCGACCGGCTGACCCCGGCCA 202189 29 96.6 32 ............................T GGGCCCACGGGCCGACGACATTGCCAACACGT 202128 29 96.6 32 .....T....................... CGCCTGGCCCGCCTAGTCGACCGGGACGCAGC 202067 29 89.7 29 ...A...................T....C GCGGAGGAGACCATGCGCGGGTCATCACC 202009 29 86.2 32 C...T.G.....................C AGCTCCGGGGTCACCCCGCTCAAGCGCACCTC 201948 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 47 29 97.5 32 GTCGGCCCCGCGCCAGCGGGGGTGGTTCG # Left flank : GCCGGTGCGCCAGCCAGGTACGACGCCAGAACCTCGAGAATGACGTCCCGGTGCTCCTCGACCAGCACATACAACTTCCCCGGCAAGCAGTCCCACATCACCCACCGGCCGCACCACGGCATCCGCCAACGCCCGACCGCTACACCCCATTGCCCACGCCGATCGACGATCGCGACACGTTAACCCGCCGCGACATACGCCGCCACGACCACCGCGGCAGCCTCCTTCGCGAATCCCAACGTGCAGTACACCTGCACGGATGAGGTATTCGGCAGGGACAGAGCCACCGATTGCCGGCATGGGAGCGACCTGGTCACCCCGCTGCTCCGGCCTCCCCCGCAATGCACTTCGCGCTAGACCTCACCTCTGAGATCATCTCCAACATGACCACGAGACCTCGTCCTCACCACCACGCTAGACGGCCCACTGGCGCTGCTCACGCCAACCTCCAACTGAAGGAAAACGGCATTGACCGGGAATAGAGTCCCAGGTCAGCAAGT # Right flank : CTCGCCGAGCTGGCGCGCGTCCTGGGGGTGCCGTCGGCCCCGGCCGGGCGGTGACCTGCTCGGCTGATCGTGCGGCCGGTGAAGACGGTGTGGGCCGGGATCTGTGTGACCTCCGCGTCCGAGATCAGCTCGCCGGTGTCAGGATCGATGACCACCCTCGGGTAGCGGACCGGTGTCCAGGCGCCCTCGGGTATAGCAGCGCTTGCGCGCTTGATGGAGGGGTTCATCCCCGTCGTGATCGAGAAGTGAGCATCGGCCCGGTGGCAGGCGGCCACCACGTCGGCGTTGCAGAACTGGCTGTCCGCGCGCAGGATGCGGGTGCCGGTGCAGCCGGCCTCGCCGGCGGTGGCCAGGGCTTCGGTGACGAACCGTTCGAACCCCGCGGGAGTCGGCTGACGTGCCCTGCCGCAGCCGCACGGCGGCGATCACTGGCCGGGCGGTCGGGGTGCAGATCGTGGCCAGCAGCGGGTGCAGCGTGCGGATCCCCTTGAACCGGCCGG # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCAGCGGGGGTGGTTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //