Array 1 1172761-1174518 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072600.1 Leptolyngbya sp. PKUAC-SCTE412 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 1172761 35 100.0 37 ................................... GACTTCACTGTGGGGGTTTGAGAGCTTCACAATTAAA 1172833 35 100.0 43 ................................... ATCACGGTGCTCAGTCAACTTTCTTTTTGATTTAGATACAGGT 1172911 35 100.0 40 ................................... CTAATAGAAGGAACACTTAGAGATATGGCTACTCTACCAA 1172986 35 100.0 37 ................................... CCCAGGGTTTGGAGGTGTTCGACCAGACGCCAACAAG 1173058 35 100.0 37 ................................... AGTCCCCAAAAGGGACCATGCTGGACAAAATAGAAAG 1173130 35 100.0 35 ................................... AAGGAACGGGGGTTGTAAGTCATGCAGATCAAGAA 1173200 35 100.0 41 ................................... TGCAACTACTTAAAGTCAGAGGGTTAACTCACCTGGCTAGG 1173276 35 100.0 37 ................................... GATGTGATGACCTGTCACAAACTACTGGGACTCAAGC 1173348 35 100.0 42 ................................... TCTCCAACCTTAACGCCATATTCGTCCAGTGCTTTGACGATT 1173425 35 100.0 38 ................................... CAACGGGTAGCACCGGCTGTAGTGCCTAGTGGGGGAGT 1173498 35 100.0 40 ................................... ACCTTGTAACGCTTTAGCAAAACGATTGCCCAACTTTGGA 1173573 35 100.0 43 ................................... TTGGGGTCTGAATGGACAAGTTACCTTGGTTAGGCAACACGAT 1173651 35 100.0 38 ................................... TTCTCACGCCATGCGTAGTAGTGAGCATAGCCAAGGAT 1173724 35 100.0 38 ................................... AGGTACTCCGGCAGATTCTAACTGCTTCTGGAAAGATT 1173797 35 100.0 42 ................................... CAAATTAAACAGCATATTTTTGTTTTGTTACTTAACTAACTC 1173874 35 100.0 39 ................................... TTTATCAACAAAATCTCTTACGAGCCAATCAGGCAGCTC 1173948 35 100.0 39 ................................... GACGTGGCGGAGCGTTTTGCACGCCCGCCAGTACGATAA 1174022 35 100.0 40 ................................... TTCGAGTATCAAGTATTAGCTCACCAACGGTTATTAGAAT 1174097 35 100.0 41 ................................... TACACCTCTATGTCGTGAGGTGTGAGATTTACGAACATAAA 1174173 35 100.0 43 ................................... GAGGGTCTTCCTTGTTGAGGACAGTGATGTTCGGAAAAGACAC 1174251 35 100.0 40 ................................... GCAAACTCGAGCTTCGCCAGATATGCACCAGAGCCAGACT 1174326 35 100.0 43 ................................... AATCCATTGCATAGCTGAGGAGAGAATTCCAGGTTTCTGCACT 1174404 35 100.0 44 ................................... TTTCCGGGTTTGCCCCGGAAACAAGCCATCCTAGGAATTGGAAA 1174483 34 80.0 0 ........................C.A.T.TTG.- | TT [1174510] Deletion [1174517] ========== ====== ====== ====== =================================== ============================================ ================== 24 35 99.2 40 CTTTCCCAACCACTTCCCCGCAAGGGGACGGAAAC # Left flank : TTCCCGACGACAGGCGGCGCACAAAACTGGCGACGTTTCTGGAGGGCTATGGGCGGCGCGTGCAAAAGAGCGTGTTTGAGTGCTTTTTGCCCCTGGCGGAGATGAAAACCCTCCAGCAGAAGGTGCAGCGGCGCATTAAGCCAGAAGAGGACAACGTCCGCTTTTACTGGATTCCAGCAGATGCACTGCCCAAAGTGCTGACCCTGGGCAGCGGCCCACCCGAACCGCCCCCAGAGTTTTACATTATTTAACAATTGCTGGTCGTTTTTTGAGCAGACCTGGATTATGATGAGCCTGTTGGCAATTACCGCCATAGGTTGGCTGAACCTTGAAAACCGCATGACTTCGTTGACCTATGGCGATGGTTTGCCCCATAAGGGTTTCAGCCATCGAAGTCTCCTAATTTTTGGGCCTTCGTGCCCTGATTTTTAGGTCAAACGTGACCTATGGAGATTGAGGCTACTGAACCTCTCAACCTGTAAAGGTTCCAGGAGGCTACC # Right flank : AATGTCCAAGCATCCAAAGAATATTTGAGGAACTCAATCAAATAGTCTTTGAGAACAATTGAAAGCACAATAAATGGTTGGCTTACCTATCTGGTTAAGCCACACTATCGTTCACATCAGAAGCGACGAAATTGAGTTGTAGCGGCGATTCACTCGCTGCCAATCAGAAAACCAAAGTGAACAGCTTAGTGACTTACTTTTGCTAGTAATTGATACGTTCTGGTTCTGGTATTGACACAATCATAACCATGAGCGTCAATACCACCTCTAATCGCTCAATTACTCTCTGCGATTCCAGCCGCTTGCGTTTCAGTGGCACCTTGCCAGGGTTTGCGATCGCGCATCATCGCGTTGAGAATGTGGAGTAACTTGTGCATACAAGCCACCAGTGCCACCTTTTTAGCTTTTCCCTGCTCTAACAGGTGTTCATAAAATTCCTTTAGCCTGGGATTGTGGCGCACGGCTGAGAGCATCCCCCTGTAGAGGACTGCCCGGACATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCCCAACCACTTCCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 2464370-2482687 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072600.1 Leptolyngbya sp. PKUAC-SCTE412 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 2464370 36 100.0 34 .................................... TTAAGCTGAATGGACTCCTGGTTAATTTTGTCTC 2464440 36 100.0 31 .................................... AGCCAAGCGAAATATATTTGTTGGCAAGCTC 2464507 36 100.0 36 .................................... GCAAACCCATCTGAAGTGGAATCTTGCCGTGGGCTT 2464579 36 100.0 36 .................................... CCTCTCTTTCTGGTTTCCCCTGATTGAGTCCGCCGG 2464651 36 100.0 36 .................................... ATGACCGTTTGCAAAGAAACTCGCCACCAGACCCCA 2464723 36 100.0 35 .................................... TTAGGACGGTCCGTAATAGAGGCATTGTCATGACC 2464794 36 100.0 36 .................................... GTAGTCGCCAAACTGTGTGCAAGCGTTTGCCGGGTT 2464866 36 100.0 35 .................................... CGAAGGTTCCAGGTTCAGCAAAGACTGCCAAAGAT 2464937 36 100.0 34 .................................... TGCTTGCCTGGGTAGCGATCGCAGGCAACAAACT 2465007 36 100.0 36 .................................... AAGGAGGAGCAAGAAAAACAACAATTGAAGGCACTA 2465079 36 100.0 36 .................................... ATAACTGCCATCATCAGTGCGTGGGCACTGCCAGGA 2465151 36 100.0 36 .................................... GAATTGAGTCCAAAAGGCAACAAAGGGCGGATAGCA 2465223 36 100.0 35 .................................... GATCTACAGTTTGTCCTCCAATATTTGGCCCGTAC 2465294 36 100.0 35 .................................... TATCTTGTGATTCCAAACAAAAAAATTAAGAAGGT 2465365 36 100.0 36 .................................... CGTTACCCGATTCGACTAAAGCAGTCGTTTGTGACA 2465437 36 100.0 35 .................................... GGTTCGTTAGCGGTGCCCTTCCGCCGTTTTTTGTT 2465508 36 100.0 35 .................................... GGGTTCGGCGCGATTCACTTTATTACGAGATCAAC 2465579 36 100.0 38 .................................... TAAACGAACAATTTGAAGAGTTGGGTAAGAGATTAGCT 2465653 36 100.0 35 .................................... TCGGATATGATGCTGAAGATGTGATCATCGTCCTC 2465724 36 100.0 40 .................................... CGACGTTTCTGGAAAGTTTTATCCTCGAATTACAGAGCAA 2465800 36 100.0 35 .................................... TCTAGATCGGTCCTTTACTACTGGCTGAGAAAATT 2465871 36 100.0 35 .................................... CAGAAATGGCAAAAAAGCCTCGTCAAGCGCAACAA 2465942 36 100.0 36 .................................... ATACTAGGTGGTTTTTTGTTTGCTAGAAAGTACTTT 2466014 36 100.0 35 .................................... CTCGATCACTATCAACTTGAACTCCAACGGGAAGA 2466085 36 100.0 34 .................................... CAGGCAAGAAACCCAGGGAGCGAGTAGAGGCTAT 2466155 36 100.0 36 .................................... TTTTTGGTGGTAGTCGTAGACCACGTTGATGAGCTT 2466227 36 100.0 37 .................................... GTAGCCGAGATCGCCTGCCTAGCCCGAATGAGTGGGT 2466300 36 100.0 35 .................................... GAGTGGGGGATTTGGGGGTCCCTCGATTCGGGAAC 2466371 36 100.0 37 .................................... GTCCCTACTTGAGCATAAAGCTCCTTCAGTTTGTCCC 2466444 36 100.0 36 .................................... GCAGTTCGCGCCAAAGAAACCGATATTATCCTAAGT 2466516 36 100.0 36 .................................... AAGTAACTGCACTTTGGAAGCAGTGAACTGCCCTAA 2466588 36 100.0 35 .................................... TATCGCTTCACAGCCTCTCAAGCCCCATCCCCTTG 2466659 36 100.0 36 .................................... AACCTAAGTGAGTGGACAACAATTAAATTATTGGAA 2466731 36 100.0 35 .................................... AACCGTATCTTTAACTGTTGGCATATGCGAACCGT 2466802 36 100.0 34 .................................... TTTAGCTGACCTTGGTAAAAGATTTGGCATTTAC 2466872 36 100.0 38 .................................... CGATCGCCGGTCAAAAAACGATTTCTTGGGCACAACCT 2466946 36 100.0 40 .................................... GACGCTAGGCAAGCATTAGACAACCTCCGATCGCGGCAAC 2467022 36 100.0 34 .................................... TTGGTGAACTTACAACCGGCTCCAAAGAGTGGTT 2467092 36 100.0 35 .................................... ATGAAAAAGGATTAAAAGCATTAATTAAAATTGAC 2467163 36 100.0 35 .................................... AGGATTTCTGTGCCGGCGTATTCCTGATAAGGAAT 2467234 36 100.0 36 .................................... AAGCGGCGGCCACGTAAGTGCCATGTCCATAAATTC 2467306 36 100.0 35 .................................... CAAGAAGGCGAGCGGATAGAACGTAGTGTCAGAAC 2467377 36 100.0 35 .................................... TTAACAGTTTTTTTTATCAAAATTGACAAATAGGT 2467448 36 100.0 34 .................................... GAGCCAGGGATTTAACGAACCGATACATCCCGGT 2467518 36 100.0 35 .................................... CCTGGGATTAAAACTTTCCAGGGCACCCTGCAATC 2467589 36 100.0 34 .................................... CAATTTATCGATATGTCGGTAGGATTCGAATCGA 2467659 36 100.0 35 .................................... CAGCCGATGAGGTGGCCGATGAGGTCGCCAGGGTC 2467730 36 100.0 34 .................................... TGGAATAATCTGGACTAATTGCGAATATTCAGCG 2467800 36 100.0 35 .................................... TTCACTTCTAACGTTTTTGCAACGACGTCTTTATC 2467871 36 100.0 35 .................................... GTACCTGATATTGCGGGGATGTCAGGCGCAAAAAT 2467942 36 97.2 34 ..................................G. AGGTGCGCTCTAAATAGATCGGGTCTAGACAGCC 2468012 36 100.0 36 .................................... AAGTCAGCTTGAAGTATATGCATGAAGAAGATATAG 2468084 36 100.0 34 .................................... TCCCGACCCGGCTTTCCTCTAAGGTTTTCGGCAT 2468154 36 100.0 34 .................................... AAAAAATTATTGGTTTTGCTTACTCTAGCCCTTG 2468224 36 100.0 36 .................................... GACGCTAGATCAAGGGAACGAGCGTTTGCTTCCCAA 2468296 36 100.0 35 .................................... AACTATTGTTTTTACCCCATTTGGCCCAAACGATG 2468367 36 100.0 35 .................................... ATTTTGGCGTTTTGCTTGGGCGCTCTTTTGATCCG 2468438 36 100.0 38 .................................... AAGTGAAATTTGCAGCAGGATCTCTTGTGATTACGCAG 2468512 36 100.0 36 .................................... GTTTAATCTCTAGGTCAATAGCCTTTTTCTTGCTAC 2468584 36 100.0 35 .................................... GCATCGTTTTTGTGTTTTATGGTTAGCGAATGGAA 2468655 36 100.0 37 .................................... TCTAACTAATCGAGTAAAAGATCAAGGAATTTGGAAA 2468728 36 100.0 34 .................................... TCCGCGTTTGATGCGAATTACAGCTTTCAGTGGT 2468798 36 100.0 35 .................................... GTGGTGTTTGGCGGGTCAGGGATGGGGTCGTCACC 2468869 36 100.0 36 .................................... CACCAATGCACCTAACAGATTGATATCCAAAACGTC 2468941 36 100.0 36 .................................... GTTCTGTTCGCGTTATTTGCAGTCGAAACAAATAGA 2469013 36 100.0 36 .................................... ACTTGAAATCCGTCTGCAAACGTAACAGTATTAAAA 2469085 36 100.0 35 .................................... GAATTAAATCGTGGACAAGCTTCTATCAATGCGTT 2469156 36 100.0 37 .................................... TTCTTCTAATTGTTTCTCTAATTCTTCTTTAAGTGGT 2469229 36 100.0 37 .................................... CGCTTAGGGCGATCGCCCAACTTCGGAAACTCTTCCC 2469302 36 100.0 39 .................................... ACTTAATTGGAGGAACAATGAACCTAAATAAATGGACAA 2469377 36 100.0 36 .................................... GACTACCTGCCAGACTCCTACACTAGGGGCAAAATC 2469449 36 100.0 35 .................................... GTAAGCTTATGGTCTTCCCAAAACTCTTGAAGATC 2469520 36 100.0 35 .................................... TATCCGAATAACAAATGGGGCGTCATTTGGCCCAA 2469591 36 100.0 38 .................................... AAGCTTTTCGATTCTTAGGTGCCGAAGTTCTTAGAGCA 2469665 36 100.0 37 .................................... ACACTGCCTCGTCTCTAGAACAGAAAATAGGACGATA 2469738 36 100.0 36 .................................... AATCTCAACTGGATATTTTCGATTTGTATCGGGAAG 2469810 36 100.0 38 .................................... ACCCTACTATTGTGCCACCAGAATTTTCAATTCCTGGA 2469884 36 100.0 36 .................................... CTGGGATAGCTGGGTTCCTTAACGAAATACTTCCTT 2469956 36 100.0 34 .................................... TCTAAACCACTTGAAACCGTTGAAGTCCATAATC 2470026 36 100.0 35 .................................... GGCTAAGGGAGGTGTGGCTCGACTACTGCAAGACC 2470097 36 100.0 38 .................................... AATTTCCTTATACTTATACCGATCAGTTTTACAATCTA 2470171 36 100.0 36 .................................... GCGTCTCTGACAATTTTGTCATTGTCGGCGGGCTCC 2470243 36 100.0 35 .................................... TTTTTTTCCCTTTGGGGTTAGCTAACTCGCTTATA 2470314 36 100.0 37 .................................... TCGGAGTAGTATCTAACCCGATCGCCAACTTAGAAGA 2470387 36 100.0 36 .................................... GGTTGATTGAGTTTTTAATGAGTTCCTAAGCCACGA 2470459 36 100.0 34 .................................... TTTTCTGCGTTTTCCATTTTTTTCCTCCGTTTGG 2470529 36 100.0 35 .................................... TAAAATTTACAGAAAGAGGAGAAGACAAAGTATAT 2470600 36 100.0 36 .................................... TAGCTCTACCCGCGCATTAGCGTCGGGCAGTGAAAG 2470672 36 100.0 34 .................................... ACAGAAATTTGGCAGAATTTCAAGTGTGGTCGAG 2470742 36 100.0 36 .................................... TCTTCCCAACGGTAAAAAACTTACTATTCCTAAACT 2470814 36 100.0 41 .................................... TATCTTCCGATTTAGTTCTGATTCTAAAGAAGTCTAAAAAA 2470891 36 100.0 35 .................................... ACGAATCTGATAGATCTTGCCTATCAAGATCTATC 2470962 36 100.0 36 .................................... GCCGTCATACCATTCATATAGAAAATCCGTATTGGA 2471034 36 100.0 35 .................................... CCCGTTCCGAAAAAGATTAAAGAAGCGATCTCCGC 2471105 36 100.0 34 .................................... ACTCTCACTTCGGCTATCAAATGGCGACTGATTG 2471175 36 100.0 34 .................................... AAGATTCCGTTGGAACGTATCTGAGGGAGATGGG 2471245 36 100.0 34 .................................... ATTTCCTTTACTTGACTGGGTATCCTAGCAACGT 2471315 36 100.0 35 .................................... AAAGGTAGTTTGCAACTTGGGGAGAATATTGATTA 2471386 36 100.0 38 .................................... CGGTTGCAGCAGGATATCAGATTACAGTTATTGACCAA 2471460 36 100.0 35 .................................... TAAATAACTCAAACGGAATGTGGCTGCCGAAAAAA 2471531 36 100.0 38 .................................... CATCTGAATTCTTTTTTTGTACTCGCGCTCGTCGAGGT 2471605 36 100.0 37 .................................... TGCGGGACCAAGTCTTCAACGATTTCAAAAATGGGTC 2471678 36 100.0 36 .................................... TAATTTGATTTCGCTTCTTTGTACGCAGCGATCGCG 2471750 36 100.0 35 .................................... CTTGTATAACTAGACCGGAATAAAACTCTTTATGA 2471821 36 100.0 38 .................................... ACTGATATCGCCACTTCCAACGGGCATCCGCCAATCGA 2471895 36 100.0 36 .................................... AGGATCCGATTTATTGGAGACATTGCACGTACAAGT 2471967 36 100.0 34 .................................... AGTCTGGCTGTCTCATGGGTGCAACTTCTTTCTC 2472037 36 100.0 35 .................................... TCGCGGTCCTGGATAGGCGTAGTGAAGCCGCCTAT 2472108 36 100.0 36 .................................... GGCAACCCGCCGCAAGCCATTCAGTCGGGATCGGCA 2472180 36 100.0 35 .................................... TTTTTAGCCGCGTTTTCATCCCGGTCATGCAAGGC 2472251 36 100.0 35 .................................... AGTTGATCCGGGTCAATGGACCCGCGTCCCTTCCC 2472322 36 100.0 38 .................................... AGAAGTCACTCTGAGTTGGCTTCTCAAACTCTTAAGAG 2472396 36 100.0 37 .................................... GAGCCTTGCTGACTCCATAATCGTTGATAAGCTTCAA 2472469 36 100.0 38 .................................... AACAAAATTACTATTCCCTTGAGGCCCCACAGTAAGCC 2472543 36 100.0 35 .................................... TTTGGGAATTTCAAAATAGCAAAAGATACCGCCTC 2472614 36 100.0 38 .................................... TAAATACCTGACAAGCAATCGGTGAGATCGTTAACCAA 2472688 36 100.0 36 .................................... TTGCAGAGAATCTGACAGTAATTTTTGAAAATAATC 2472760 36 100.0 34 .................................... AACATAGTCTGTTTGGTTGGTTTACTCTTCAATC 2472830 36 100.0 34 .................................... AGGAGGGAATCAAGATTTCTCAGTCTCAGCTCGA 2472900 36 100.0 37 .................................... CAGAGGTCATCCGCATTACTTGTGAGGTAAATAAACC 2472973 36 100.0 36 .................................... TATTGCTTAATCACTGAAATCGGCGCGCCTCCAACC 2473045 36 100.0 36 .................................... GGGTATCCTTGGGTATCTCTCTATGCCCAAGTGGGA 2473117 36 100.0 35 .................................... AAACTTTAGCATTTTTGTATAACCTGGCTTCACAA 2473188 36 100.0 35 .................................... CGCGTTCCCTGGATTACTGCCAGTGTTCCCGCCAC 2473259 36 100.0 35 .................................... AATACGGGGTGACTTACGCTTCTCCCTTTCAAGGA 2473330 36 100.0 35 .................................... GGCCAACCCATGCGCTAAAACGAACGCAACGGGAA 2473401 36 100.0 36 .................................... ATCCAGAATTTTAGCGTTTTTGGGCAAGATCATGCG 2473473 36 100.0 36 .................................... CTGAATTACGGGATTGGGCCTGAAAAAGATATTGAA 2473545 36 100.0 35 .................................... TAAATCTTTCTTGACAAAATCAACTATACCTGGAA 2473616 36 100.0 40 .................................... ATAGCTGGACTCAATTGCCCGCGATCGCGTGTGTCTGTTC 2473692 36 100.0 38 .................................... TAATATATCGTTCAATAAAGTTGATACCAAGATCGATA 2473766 36 100.0 35 .................................... CTCGTTTTGCCTTACGGTTTAGAAGGTTTGGACGC 2473837 36 100.0 34 .................................... GATTGGATCGGGCTGGTGCCACAGGGGAGTCTAT 2473907 36 100.0 36 .................................... AACTATTGTTTTTACTCCATTTGGGCCAAACGATGC 2473979 36 100.0 34 .................................... CTCACAGATCTGGAAAATTGGTCGAAGAATTAAG 2474049 36 100.0 34 .................................... TGGCGTGAATATCATCTTTACGCCAGCGAGTGCC 2474119 36 100.0 37 .................................... TCTGAAACTGAAATCTTAGATTTGGAAAAAACAAAGG 2474192 36 100.0 36 .................................... AGATCCCTAAAAATCTCATGCAAGTCATTACCTGAG 2474264 36 100.0 35 .................................... GAGGGGCTTTATTGGGGAAGATTCTCTAGCCCTAG 2474335 36 100.0 35 .................................... GTGCTGGACGAGTTCGCTCACGCTAACGCGATCGG 2474406 36 100.0 41 .................................... TAGGTTTCAGGAGCTTCCTTACCCCCCGCCTGCTTATAGGA 2474483 36 100.0 35 .................................... AAAAAACTTGAAATTGGAATCCTAACACCCAAAAC 2474554 36 100.0 35 .................................... TAAATCTTTCTTGACAAAATCAACTATACCTGGAA 2474625 36 100.0 35 .................................... AAAGTGCAGGAACAATGGAATCAATTGCAACGCCG 2474696 36 100.0 36 .................................... ATTGATGGGTTCGGAGAAATTCAACTCCGATCCACA 2474768 36 100.0 36 .................................... GGTGTATCTTCTGTAAAACATTCTATCGATATTCCC 2474840 36 100.0 39 .................................... ATGCCGCCGATTTCTACAACCCCTGTGGGGTTTAGTAAC 2474915 36 100.0 36 .................................... TTGACAATTTTTTTTAGCTATAAGACTAAGTTAATG 2474987 36 100.0 34 .................................... CAATGTTTTCCTGAGCTAATGCCAGGTTCCCCCT 2475057 36 100.0 34 .................................... GCTTACCTGGCCATCACCCTCTAACCCCCAGACC 2475127 36 100.0 36 .................................... GCTAATTTAATTCTAAGTTTGTGAGAAAGTATTGAC 2475199 36 100.0 35 .................................... ATTGTTATCGGGGGCACTGTGGGGGGTGTTCAGTA 2475270 36 100.0 36 .................................... TCTGTCTGTCTGTCTGTCTGTCTATTCACCTGTGGG 2475342 36 100.0 34 .................................... AATCTCAACTGGATATTTTCGATTTGTATCGGGA 2475412 36 100.0 34 .................................... AACCGAATTTGCTCGCCGTCTGTGTACGTTGAAA 2475482 36 100.0 35 .................................... TAAAAATCAAAATTGTAAAAATTTTCAGCTCTACA 2475553 36 100.0 38 .................................... AAGTCGAACATACTTGTAATTTTTCTCACAGATGGGAA 2475627 36 100.0 37 .................................... TCCAACAAAAAACAACCAGTCCAATTAAATCAAAATT 2475700 36 100.0 37 .................................... TGAAGAACGCTTAGATTTTTTGGAATCTGAATACGTT 2475773 36 100.0 39 .................................... GCTCCAAAACAGTGTCCGTAGGGCTTGAGTCTCATTGTT 2475848 36 100.0 35 .................................... AGGGCAACTTTTAAGTTCAGTTTGGCTTCGAGGGC 2475919 36 100.0 38 .................................... GCCGTTTCTTCTCAGCAAGGACTCAGGATCGGCAAGTT 2475993 36 100.0 35 .................................... GGTTAGCCCATATGTCACAGGCAATCGGGGTCTTT 2476064 36 100.0 41 .................................... ATCTGCTTGTCGTAGGGATCTTGATAACAATAAACTTCACC 2476141 36 100.0 37 .................................... TTTATAAAGCTGACCGAGAACACTTTTTGTATACTGT 2476214 36 100.0 34 .................................... CATGACACCATTCATATAATCTTCATTTTTTTCT 2476284 36 100.0 35 .................................... CGCGTCAGAATTCCAAGACGCAAGGTGTAAACGCG 2476355 36 100.0 34 .................................... ACCGACAGGATCCCTCCAAAATGCGGTTTTTCAG 2476425 36 100.0 36 .................................... TGGGATTCGCCAACACGAAAGCCGGGAAGGTAGGGA 2476497 36 100.0 35 .................................... TGGGGGTAGGGAAAATCAATATTGCTGAGGCTTCC 2476568 36 100.0 35 .................................... CCTGACGTGGGAGTAATAGAGCGTTGGTCTGAGGA 2476639 36 100.0 34 .................................... AAAGCTGAATTTGCAGGCTCAATTGATGAAGCTT 2476709 36 100.0 36 .................................... CCGCTTCATCAAAAAACAAGTCTGTCACAGATGGCA 2476781 36 100.0 36 .................................... CCGGATGAAACCGCAAAGCAGCACGGCTCCTTCTTC 2476853 36 100.0 37 .................................... TCAAGGAATGAATTGATAAAAATCGATAATAATACGA 2476926 36 100.0 37 .................................... CCGCAGATTGGCATCAGTTGCAGGTTCGAAAACAAGG 2476999 36 100.0 36 .................................... TCACCAATTGATTTAGATTATGTTATGTCAACTGAA 2477071 36 100.0 37 .................................... GGGTAAATCGACGGGAATGGAAACGGTGCGTTTCATA 2477144 36 100.0 35 .................................... TATCACGGTATACTGTGGCTCGTCACTGTTTTACG 2477215 36 100.0 35 .................................... TCGGTTGATTGATTTCTAAAACCCTAACAACTTTA 2477286 36 100.0 41 .................................... CCTCGAATTAAATGGGCATTTTCACACCCCACAGTGGGGAG 2477363 36 100.0 35 .................................... TCGACAATTTTTCCAGATATAAAACTAAGTTAATG 2477434 36 100.0 35 .................................... CCATAGTTTGAAGAAGTCCTATAACAACGTCACTT 2477505 36 100.0 40 .................................... ACCTGAGCCGGCCGCGGGTCGCAGCCGCCAGTGCCGTGCC 2477581 36 100.0 35 .................................... AGTCTGGCTGTCTCATGGGTGCAACTTCTTTCTCA 2477652 36 100.0 34 .................................... GGCAGAAAGAGAATACACCTACAAGCTTATGGAG 2477722 36 100.0 34 .................................... GCATCAACACCAAATCAGAAAGCAGGGGGAGATT 2477792 36 100.0 34 .................................... GTTGGGGATACAACTGATAAAGAGTTTTCTTAAA 2477862 36 100.0 34 .................................... GAAGCGGGTTGTATTAGCGGGAACAGTCAAAGAC 2477932 36 100.0 35 .................................... AACCCGTCCTATATCCTCTGGTGGAACGTGATCAA 2478003 36 100.0 35 .................................... TCTGCCAGATCTTTACTGGCTACCCGCTCCCAGGG 2478074 36 100.0 35 .................................... CCGGTAGTGTTTCGTCCGAAATCAACCCGCTAGGG 2478145 36 100.0 35 .................................... GATCTAGTTGGCAATTGTTATTATCACGGGCAACC 2478216 36 100.0 35 .................................... TTCACTTCTAACGTTTTCACAACCAGTTTCATCTC 2478287 36 100.0 35 .................................... ATGCACTGAGCAGGAGGACTCAGGCTTAATCAGCT 2478358 36 100.0 35 .................................... GTTGGGCGTTCTATCAATTGCGGTTGTTTCTGTCT 2478429 36 100.0 34 .................................... ACAACAGGTGATCCAGGCAACCATGCCGGTTCAC 2478499 36 100.0 35 .................................... CTATTATAGCAGGACGGATTTCAGCTGTCAAGCCT 2478570 36 100.0 37 .................................... AGGTCCTTTCGATTTCATCGCTGAAAGGGGGGTTCGC 2478643 36 100.0 34 .................................... ACCACGAGATAGGACAACAGAAAGGGGCGCGATC 2478713 36 100.0 34 .................................... TTAAGGCAGCATAAGATTTAATTATATATCAAAA 2478783 36 100.0 35 .................................... AGGTAAGTTTGAAATATGTTTACGAGGAAGAGATA 2478854 36 100.0 37 .................................... GATCTAGTTGGCAATTGTTATTATCACGGGCAACCCA 2478927 36 100.0 35 .................................... TTGGGAGCGTTGGCGTAGCCTGTGCGTAGCACGTA 2478998 36 100.0 35 .................................... TGAAATTTTTAGAAGAAGACTACCCCGATTTAATT 2479069 36 100.0 34 .................................... TTTTCCATTTTTTCCTCCATTTTTTCTCCTTTTG 2479139 36 100.0 35 .................................... TGCTGCGGAATGCAAAACCTATTCGATTGGATACC 2479210 36 100.0 35 .................................... ATGTTATTTGGATTTTCCAGTGAGTGGGAAGCCGT 2479281 36 100.0 35 .................................... CCGGTAATCTGCCGGTATCAGAAGTTTCAAGGATT 2479352 36 100.0 36 .................................... AGCTGATCCCCACCGGTGTGGGGTTTGTTAACGTCT 2479424 36 100.0 36 .................................... CCGACTATTTCTCAGATTGAAACTGCTTATCCGATA 2479496 36 100.0 35 .................................... CCGCGTGCATTGCGGTAGGAGACGTTCAAAACTAG 2479567 36 100.0 34 .................................... TGGACAGCAGAGATTGACTTGAGAGTTTTAGCTA 2479637 36 100.0 38 .................................... GATCCCAGTTCTCCCCAATCACCCCCGACACCCGAACA 2479711 36 100.0 35 .................................... AGCAACGGCGGGCCCGATTACGTCACCACCCAGGA 2479782 36 100.0 36 .................................... TTTTCTTGCATGTTTTTTTCTCCTTTTGTTTGTCTG 2479854 36 100.0 35 .................................... AGGGTGAGTAGCCGCATAACGAGCGGTTTGTACCT 2479925 36 100.0 37 .................................... GCTGAAGACCTGGGGGAAACGTTTAAGGATGTCATTG 2479998 36 100.0 36 .................................... ACGGTTAGGTTTGCGTTGTTCTACGTGGCAACGGAG 2480070 36 100.0 36 .................................... GTCCAGAATTTTAGCGTTTTTCGGCAAGATCATACG 2480142 36 100.0 36 .................................... GCTCAGAGGGGAGAACAGGGTAATCGGTGGGTGGGG 2480214 36 100.0 34 .................................... GGGAGGAGAAAACGTTTGATCCGGGCATCCGAAA 2480284 36 100.0 35 .................................... TGGATTCATCGGCAACGAACCGGCAATCCCCTAGG 2480355 36 100.0 35 .................................... ATTACGATGTTTGGAAACGGCGCGTGGAACGGCAA 2480426 36 100.0 36 .................................... GGAACTGAAATATTAAACGATACAAGAAATTGGCTG 2480498 36 100.0 36 .................................... TCGCTTCTAAGTGGCGTAAAGATTGGGAACCAAATT 2480570 36 100.0 34 .................................... TGATCGCGATCGATTTTGGCAAAGTGTCGTCGAC 2480640 36 100.0 40 .................................... GCGCCACTGGGGTTATCACTTTTCACTCAAGCCAAGCAGG 2480716 36 100.0 36 .................................... TTTGCAAGATTGACGTGGCCAGTCTATACCCGTGGT 2480788 36 100.0 34 .................................... CCGGTTGTTGCGTTGTGTAGCGCTGGTGCAATTG 2480858 36 100.0 35 .................................... GTCATCGCTAATCAAATTTGGTCGGACGTTAAGTA 2480929 36 100.0 35 .................................... ACAGTAGGGGATATTGTCTTTACTTATATGGGCGA 2481000 36 100.0 34 .................................... CTTTGCGATTCATCTCTATTCTGGTGAAAGAGAG 2481070 36 100.0 37 .................................... TTTTTATTGCTCCTACTACAGACGCAATTCTGGACGT 2481143 36 100.0 37 .................................... GTGGTTGCATGTTGTTATGGAGATTGAAACTCCTGAA 2481216 36 100.0 34 .................................... TTGGTCTCAACGAACAAAACAAGGAGAAGAAATG 2481286 36 100.0 35 .................................... TTCGTGAATCGCGTGGCCAGGACAATTTTCTTTGA 2481357 36 100.0 36 .................................... ATGGTTGATATTTCTACTTACAGAGCTTATAAAGGC 2481429 36 100.0 34 .................................... TGTTAAGAACTGATATGAACTTGATCTCCCCCAA 2481499 36 100.0 38 .................................... CTCCTGGGTCAGCGACTCTAGCACCGCATTAGCGAAGA 2481573 36 100.0 35 .................................... GTCTAGGATTTTAGCGTTTTTGGGCAGAATCATAC 2481644 36 100.0 36 .................................... AAATCCAACATGTTCAATGGACTTGGCCAACAAAGA 2481716 36 100.0 36 .................................... ACGATATCCACGCCAAATACTTCATCCCGGATAACG 2481788 36 100.0 35 .................................... GTAAGCCAGTCAACGGATCAAACATTCCGCCTATC 2481859 36 100.0 37 .................................... CTCTGGGTCCGGTTTGTGTCATATAGCCCTGCCAGGT 2481932 36 100.0 36 .................................... AAGAGATCCTGCAACGCCTGACGGATGCCCAAGCCC 2482004 36 100.0 35 .................................... TTTTCCTGAGTCCGATATCCGGACCCGGCAATATC 2482075 36 100.0 38 .................................... AGCAGGGGGTTGCCAAGCAACCCCCTCCCCCCCGCAAG 2482149 36 100.0 37 .................................... TTTTTGCCGGTGTTTTGCCAGGTTCAGTAGGGGGATC 2482222 36 100.0 36 .................................... TCCGGGATCATTTCAGCGTAGGCTTCTTTTTCTTTT 2482294 36 100.0 35 .................................... AGGGAACAAGGACATGAGCCTTCGACCGATAACAG 2482365 36 100.0 36 .................................... CGATCTGTTCGGAAACCAATTTATTTCACAGATATC 2482437 36 100.0 36 .................................... ACGATACCAGAATAAAACTCTCTGTGATATTCAAAC 2482509 36 100.0 37 .................................... AAGCAACCCACAAGATACAGGTTTTCCTATCTCTCCT 2482582 36 100.0 34 .................................... TTTTAATAATCGCTCGTTCTCTTCAAATTCTTTT 2482652 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 256 36 100.0 36 GTTCCCAAACCTTTGATGCCACAAGGCGTTGAGCAC # Left flank : AAACGTTGGCGCAAGGCTTTTGAACTGTTGAAAGGCTATGGAGAACGGCTGCAATATTCGATTTTTCGATGTCGTTTGAGCCAGCGAGAGCGGGAAAAATTGCGATGGGAGTTAGAAAAGATTCTGGCTGAGGAGGATAGTTTGTTGCTTGTGGGGGTGTGCGATCGCTGTGTGGAGAGAATCCAGGCTTGCAACCGTCCAGAAACCTGGACTGTGGAGCAGGAACGACACCGGATTTATTGATGCAAGGATCAGTGATTGTTGATAGAAAACTCACCGTTCTATCTCGCCTAAACCTTAGCAGGCAAGGTTTTGAGGGATTAAGAAGTTTCAGGAGGTGCTTGCAAAATGTGAAACCTTGATACGCTGGGCTTTGCATCTCGGCTTTCTCAAGAGATAATGTTAACAGGAACTTTTTGAGGTAACAGTGGTGACTGGAATGCCAGATACTTGCAAAACCGCTCAGGGATGCTTTTGTATCGGAGCTTTCAGCCACCGCT # Right flank : CTTGAAGACGCAAAACGATTATTGGAGAAACAAGGTATACTTTGCCGGGGTATAGATTTTACCCTCTAGATAAAGTAGAAATGAGGTAGACCGTTGAGTGTTGAGCACGGTGCCTCCCAATGATCCAACTGAGCTTTAGTGCCGAAGAGATTGAGCAACTACATTACGAACGCTTTCACCATCCACATCCGCGTGTGCAACAAAAAATGGAAGCGTTGTATCTCAAAAGTCAAGGATACTCGCATCAGGAAATTACCCGGTTGCTTCGGGTGACAAAACCAACGTTGTTGAGCTATCTGCGAGATTATGAAACTGGGGGGATCGGCAATCTCAAAGAATTGACCTTTTATCGACCCCAGAGTGAACTGAAACAACATCAACAGACTTTGGAAGCATACTTCCGGGCAAATCCTCCAAAGACCCTAGCGCAGGCTTGCGCCAAGATCGAAGAACTGACTGGTATTGTCCGTAGTCGGGAGCAAGTGAGGGTGTTTCTCAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCAAACCTTTGATGCCACAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 3 5877270-5869476 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072600.1 Leptolyngbya sp. PKUAC-SCTE412 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================================================== ================== 5877269 34 100.0 36 .................................. AGGAATTGCAGTTGAACAGTGGGTCAAAGAATTAGA 5877199 34 100.0 37 .................................. CTTCTTCGATAGCGCGTGACAGCGAAGTCACTAGTGC 5877128 34 100.0 39 .................................. AGTCCGGGGCAAGTCAGCAGCCACCTCGGAGGTAGTTAG 5877055 34 100.0 34 .................................. GTGACCTCCCAGAACGGTAAGTACGTACTTGCCG 5876987 34 100.0 38 .................................. GCAAACTGTGACTCCGCCTGGAGAATTAGGAATTATAA 5876915 34 100.0 39 .................................. ATTTCTTCAATTCTTGATTCTAAAGACGCTGAAATAAAA 5876842 34 100.0 36 .................................. TCCAGCGCTGTTGCAGCGTTAATTTCTGCTAGTGGG 5876772 34 100.0 40 .................................. TGCCAGGGTGATTTCTACTGCTGAAATCACCATTCACACC 5876698 34 100.0 38 .................................. TTGTAACTTTGATCTTTGCAAGATCTTTCTCAAAATTG 5876626 34 100.0 39 .................................. GATCCCAAATAGTTGAGGGAACGGTTGAGGATACAACTG 5876553 34 100.0 41 .................................. ATGTCTACGATCAAATCTTTCCAAAAGCAACTAGAAAAGGC 5876478 34 100.0 67 .................................. CTATTCAACTCGCTAACGAGTGGAATATTAAGTTGATATTAAAATCTCTCAATATCGATCTAAACCT 5876377 34 100.0 37 .................................. GGGATTAATTTAGGTTCTCTAATATCACCTTCTCTTA 5876306 34 100.0 39 .................................. ATTGTATTCACTTTGAGACATATTTACCTCCCTAAAAAT 5876233 34 100.0 38 .................................. CCGACTGGGCAGAGGTAGCCGACTCTGTCAGGTAGCGA 5876161 34 100.0 40 .................................. GCAATCACCCTGGTGCGAGCCAACGTCAAATACCCTGCCG 5876087 34 100.0 42 .................................. GATACCAGTAGTTCCCAACAATCCGTAACCAGAATTAATAAA 5876011 34 100.0 37 .................................. TGGTGGTGAATCCGTTTCCCTTTGATATAACTAATAT 5875940 34 100.0 38 .................................. CATGCGGATCGCCATACCCTTGATGCGAGTCTTTAACC 5875868 34 100.0 39 .................................. GTTCCCTGTTAATAGGGGTGAATTGCTCACTTTCCACGG 5875795 34 100.0 35 .................................. CGCAAAAATTCCTTCTTTGATGCTTGTCCATTCAT 5875726 34 100.0 39 .................................. GGCAACTTCCTTGTTCGCCTCCATCCGACGCTTGGCTTC 5875653 34 100.0 37 .................................. TACAGAGATTACAGACAGAGACTACATACAACGTGAT 5875582 34 100.0 39 .................................. TAACCGGCTTCAGTCCGCAGCCGCAAGCTGCCAGCAAGT 5875509 34 100.0 38 .................................. AGTTTTGGGCTTGTCGCCAGGTAGTAGGCTCAGGTGGT 5875437 34 100.0 37 .................................. TTAGTTGATTGGAGTTTTACTCATGCGCAGCCATACC 5875366 34 100.0 37 .................................. AAATCCGAGATTTTCGGAAGCGGTATCAGCAGGGAGG 5875295 34 100.0 41 .................................. ATTTTCTGGTTCGTCGAGAACCGGTGAAAGAAGAAAGACCA 5875220 34 100.0 38 .................................. CAGCAACTGTGATCGCTTTGACTTTCCGATAGTACTCG 5875148 34 100.0 39 .................................. AACACTAAAAAACAAGCAGCTAAAAAACAAACCAAAACT 5875075 34 100.0 37 .................................. TATCATCAGTCCTGGCACTCGGATCAGATTAATTTGA 5875004 34 100.0 36 .................................. AAGCGATTTCCGATCTTGAGGCGGAAATTGCTTCTG 5874934 34 100.0 40 .................................. AAAATTACTATTCCTTTAAGGGGTCACAGTAAGCCCCGGG 5874860 34 100.0 40 .................................. AACGTTTATCTTTCAGATCCTCAATTTCTTCAGCACTCTT 5874786 34 100.0 41 .................................. ATTTCGTCAGTCGCCAAAACTTGATTAAACCAAGTTGTGCT 5874711 34 100.0 40 .................................. GTCGTGACTTTTCGTCAACTGAAATTTTGTCGGTTCTAGT 5874637 34 100.0 39 .................................. AAAATTGAATCGCCTCTAGTATCACAGCAAAAAAATTGT 5874564 34 100.0 40 .................................. AGGAATAATTTGCAGTTCAGTCCCCACAGGAGGGAGATAG 5874490 34 100.0 38 .................................. GCAGAGGGCGAAACCGTAGCCTTTTTTTCAAAGCCGTA 5874418 34 100.0 37 .................................. ACCAGTAGATTCGAGTGGGAAGAAGCAAACCAGGGTT 5874347 34 100.0 38 .................................. TATAAAGCTGAGCGATCGCTGGATCGTCAACGAATTTT 5874275 34 100.0 38 .................................. CCAATGCCTAACCCTCGCGGCAACCCCGAATCACTCAA 5874203 34 100.0 39 .................................. AAATTTATCTAGATCAGCTAAAGCAAACTTTTTGTTCTC 5874130 34 100.0 41 .................................. GAGAAATTAAGTTGCGCTCTGGGCGCTGCGAATTGCTTCAA 5874055 34 100.0 38 .................................. CCAGTAGCAATAGGATCACCACTATCTACCGCTGGAAA 5873983 34 100.0 39 .................................. TCTACTCGCTGGAAGCTTGTTTGGTCTTCTCACCCAGAA 5873910 34 100.0 39 .................................. ATTCAGGTAACTTCCCACTGTGCTGTGGGGTTTCCAATT 5873837 34 100.0 39 .................................. CACTTCTTGATGGGATCAAGTCCAGTGTGCGATCGACAC 5873764 34 100.0 37 .................................. GGTGGGGTGGGGTCCCCGCGTAGAGCAAAAACCCCAC 5873693 34 100.0 37 .................................. TCTACAAACTATGGCACAGGCGACACCCCAACAGATT 5873622 34 100.0 38 .................................. AAGTTAGGCACTACACGAAAAAGTTAGGCACTACAAGA 5873550 34 100.0 36 .................................. TATTAAAGGATTGAAGGGCTATCAAGTCTACGAAAT 5873480 34 100.0 38 .................................. TATATTTATGAAGAAGATATAGCTGATTTCCAGCCATT 5873408 34 100.0 39 .................................. TCAAGCTGCTCCGCTCCATCCAACAGCAGCGGGCTAAAG 5873335 34 100.0 37 .................................. ACTTTGCTGATGGTTCGCGATCGCCGTCACATTAAGG 5873264 34 100.0 36 .................................. TAGTTTTGTGACTCGATACCAGAAATGGCAATCAGG 5873194 34 100.0 37 .................................. AAAATGGGGAAATCGTTGCAATTGACGATGGGGAAAG 5873123 34 100.0 38 .................................. TTTAATAACCGTGGGGCCGGTGAGGTGTTTAGTAACAC 5873051 34 100.0 40 .................................. GCGACAGTAATCGCAGTTTGCGCTACGGGATTACAACCCA 5872977 34 100.0 40 .................................. AGCTTTATTACGGTCACTTACAGTTGGATTTGTTGTCAGT 5872903 34 100.0 39 .................................. GTTGGTGAGCTAATACTTGATATTCAAATTTTAATAATT 5872830 34 100.0 42 .................................. ATCTTGAATATCACAGAAAAATTCTGTACAACACCCCACAGG 5872754 34 100.0 37 .................................. AGGACCATGAATGTGACAAGAAACCCGAGATTATTCT 5872683 34 100.0 39 .................................. ATTAATAACCTTTGTATCTGTCAAAATAGAGGAGAATTT 5872610 34 100.0 37 .................................. TGTAATGCTTTTGAAGGTTAAGTGCAGGGATTCTAAT 5872539 34 100.0 34 .................................. TAGGGAAGTTGTGGCAACGTCCGCACCAGATTGT 5872471 34 100.0 39 .................................. AATCTCGTCCAGTATCAGCAATCCAGGATTTTCAGAATT 5872398 34 100.0 42 .................................. AGTCTCAGCTTGATAAGTTTATCAAGTCCTATAGATCTGATA 5872322 34 100.0 34 .................................. GCAAGTAGGTGTTCCCGTTGAATTTCAAATCGGC 5872254 34 100.0 42 .................................. AGGAAGAATTGACTTCACTTGTTGAGTATTAACGTCCTTGTT 5872178 34 100.0 38 .................................. TTGAAGAAACGTTAATCCTACTGTCGGATTTAGACAGT 5872106 34 100.0 38 .................................. TCCGAACAATCTCGTACAGTTCGCAAACCTGTTTACTT 5872034 34 100.0 41 .................................. TCCCGGTCGCGTTTGTCCTGGCACATGGGTTGGCCCATATT 5871959 34 100.0 37 .................................. AATTTGGTATTCACCACGGCGATCGTAAAATCCATGT 5871888 34 100.0 39 .................................. ATCACCCATAAAAAAACTCCAGGTAATGGAACCAACCAG 5871815 34 100.0 40 .................................. ATATTTATGAAGAAGATATAACTGCTTTCCAGCCGTTCTT 5871741 34 100.0 43 .................................. GCTTTTACCCTGGAGGTTCTATGCGCTACTTAGTCGTCAAATC 5871664 34 100.0 39 .................................. GCCAGAAAAGAAGCCTGATAGTAATTTTGGAATTTTACA 5871591 34 100.0 39 .................................. GATTGGTATCAGCACTACGTGCCAATCCAATTTTGAACG 5871518 34 100.0 38 .................................. CGTCGCGTTGTGGTGACTTGCGATCGCCGTGGTTATGC 5871446 34 100.0 39 .................................. GGTCGGTGTCGATTTTACTGATACGGGTAGCGATTCTTT 5871373 34 100.0 37 .................................. TCTTTCTGGAAAAAGAGGACGGAACTCAGTTCCAGGT 5871302 34 100.0 38 .................................. TGAAGGGTATTTCAAAACTAAATCAGAAGCAATAGAAA 5871230 34 100.0 35 .................................. TTGCAAAGATCAAAGTTACAAAAACAGAGCAGAAT 5871161 34 100.0 38 .................................. GCTGCCATTATTTAAGCCCACCCCCCGAACCAGGCATC 5871089 34 100.0 37 .................................. AATGTAGCAGATTTGTTTCGATAAAGGACGTACTCAA 5871018 34 100.0 38 .................................. GAGCAATTCAGCGATTCAAAGTGGAATCTAATTCTGAA 5870946 34 100.0 38 .................................. GTCGCTTGAATCTCTGGGTAACGCCAGAATTACTACTA 5870874 34 100.0 37 .................................. AGGTAAAAAAGCCTTACGGTTGAGTCCCTTTGCAATG 5870803 34 100.0 37 .................................. AAGGTGATTATGACGGTCGTAGAGGAATTTATGGACA 5870732 34 100.0 35 .................................. AATTTGGAGGAAATTCAATGCTAAATAAATGGACA 5870663 34 100.0 37 .................................. GCCTTGCATCTGTCCTCAGGTCGGATATCAGAGAGCT 5870592 34 100.0 40 .................................. GGGGATTGCTCGGTATTCAAAGCCTTTGTTGGTTTGGACT 5870518 34 100.0 38 .................................. GATTTACTTCAGAAACGTCAATATATTTAACGTCTGAC 5870446 34 100.0 39 .................................. ACTCCAGAAATATGTCGTTTGTATTTCCCATACTGGGAA 5870373 34 100.0 38 .................................. GAAATTTGATTCCTTTCGGTACAAAACTCCACCTAAAA 5870301 34 100.0 38 .................................. ATGGAGCTTAACAGAAATTTTTTGGTTCGTCGAGAACC 5870229 34 100.0 40 .................................. GACATTTGGATTTCCTCCGTTTGGTTTACTCTTATAAGAT 5870155 34 100.0 40 .................................. AGGCCATTGGGGTCTTTGACCCCAAACTTCAAAAATATGT 5870081 34 100.0 36 .................................. CGTCGAGAACCAGTGAAACAAGAAAAACCAACCTTT 5870011 34 100.0 40 .................................. AACAAGAGGGGTTTTACTGTTAGTGGCTTCCGCGGGACTC 5869937 34 100.0 37 .................................. ATCGCTTGACATTATCTTGGAATTTGTCTAACTTATA 5869866 34 100.0 38 .................................. TTGCTCTAAACTTAACTGTAAATCAATTTTTCTTTGTT 5869794 34 100.0 39 .................................. CCCATAAATTCGAATCAACTCACTGCCCGCAACCTGATC 5869721 34 100.0 35 .................................. GTTTTGAAATTTTTCAGAAGCCGTCAAACTCCCAC 5869652 34 100.0 37 .................................. GGCTGACCCTGGAGTGTTATCCCACTCAAGCTCTGTA 5869581 34 100.0 38 .................................. GGCGGGTAGATCACCTGTCCCGCGATCGCTTCCTTGAA 5869509 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== =================================================================== ================== 108 34 100.0 39 GTTTCCGTCCCCTTGCGGGGAAGGGGTTTGAATC # Left flank : TGAACACCTGTTAGAGCAGGGAAAAGCTAAAAAGGTGGCACTGGTGGCTTGTATGCACAAGTTACTCCGCATTCTCAACGCGATGATGCGCGATCGCAAACCCTGGCAAGGTGCCACTGAAACGCAAGCGGCTGGAATCGCAGAGAGTAATTGAGCGATTAGAGGTGGTATTGACGCTCATGGTTATGATTGTGTCAAACCACGACCAGAACGTATCAATTACTAGCAAAAGTAAGTCACTAAGCTGTTCACTTTGGTTTTCTGATTGGCAGCGAGTGAATCGCCGTTACAGTTCAATTTCGTCGCTTCTGATGTGAACGATAGTGTGGCTTAACCAGATAGGTAAACCAACCATTTGTTGTGCTTTCAATTGTTCTCAAAGACTATTTGATTGAGTTCCTCAAATATTCTTTGGGTGCTTGACATTCAACATAATCGCTTGCAGGGAAGAGGGGTTGAATCATCTGATAGATACGGTAACAATCAGCTATAAACGTCTT # Right flank : AGGTCGTCTACAGTAGCTTACCAGGTGGGGCTTTGAGAGGACAAATCGACGGACCTCTTAACTATTGTCAAAAAGCCTCTTTGATTCTCAACAAGCATCTTCTGCGAAGCGCCAGAAAGCCCACCGGGAAAGCCATCGACGGAGGTCAACGAAAATATGCGGTTTTCAAGGTTCAAGCCAGGTGTGTCGATGAGACGATACATTTATCAAATCTCCTCCGTAGTATAGCAATTCTAAAGCGGTTGTAAACATGGGACGGTGAATCTATTGGGGATTTGGGAACAGGGAACAGGGGAGAGGGTCAAAAGGGCGCATGATGGGCGCTATAGGGAATCCCAGGGCGTGCTTTATTTAAGGGTTGGTCAAAGCCTCCTCCTTTTGTATGAGGGATCAAGGTTTTGAGAAGCCTTTAAGGCAGACCTTGGTAGAGCAAATTAAAAGTTCTGCAACGTAGGTTGGGTAGAACAATAGCGAAATCTGGCCATTCCAAAGGCTTCATG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGTCCCCTTGCGGGGAAGGGGTTTGAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //