Array 1 218248-218678 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSKX01000003.1 Parabacteroides merdae strain AM26-6AC AM26-6AC.Scaf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 218248 47 97.9 29 ..........A.................................... TACCGCTACATAAGTAGCTTTATACTCGT 218324 47 100.0 30 ............................................... ACGACTCGATCATCTGTATAACGAAATCCG 218401 47 100.0 30 ............................................... AGTATGGAAACAGTTAATTTCGTCTATTTT 218478 47 100.0 30 ............................................... CCTCGCACTCTCCTACATGGTGGTGTATAA 218555 47 100.0 30 ............................................... AAAGCGTTGTATAACTTTACGGCACCTACC 218632 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 99.6 30 GTTGTGATTTGCTTTCATTTTAGTATATTTGAACCATTAGAAACAGC # Left flank : AGAAACAAGCAGATAATTCCGTAAACCCCCCCATGTTGCCATCCTTTACATCCGGGTGTAGGGAGCCGGTACATCCGGGTGTAAAAGGGGGTAACATGGGGGTGTCCGGCAACTAAAGTGCCGTGCCGGACAATAAAAACTACCCGGTTTCACCTATTTTATAGCCGTTTTTACATAAAATAATCGAGTGGTTTGCAGGGATGGGAATCAAGTGTTTATTGTTTGTTTTATTTGTAATATACTAATATACAGATATGTATAAGCGGTATACCTGTTTCCCATCCAAGTTGCCAGTGATAGGGTTGTGATACCGTAGTGATAGAGAAAACGGGCATATATCACTAATCAAACAAGTTGAATATCAATTGGTAAAAAGAAATCAGTGATACAGTGACAGAGGAAATGGGAAAAACTTATATGATAAGGTTCTGTTTTTTCTTTGATATAGTTCATACGATTTCCGAATTTTGTGTGGTTGCCCTGGCTATAATAAGCCATAC # Right flank : CAGAATTGCTATTATCAATTAATAATCAATGGTTTATAATTCAAATTAAAAATAAAAAACAGACGTTGTTTCAAGGCAAGAATCCTGCATTGAGTAGGATTCTTGCTTTTTAAAACAGTTCCAATTGCTGCCCCGGAGTATTTACTTCCATTGTTTTTTTACCATAAAAAAGCTCTATATTCCCAAATTGCTTATCCGTAATACACATAATTCCAACCTTTCCATATTCCGGAAGAAAAGATTTAACTCTTTTTATGTGGACATCTGCATTTTCACTACTGGCACAATGACGGACATAGATGGAAAACTGAAACATGGTAAACCCATCCCGTTGCAGATTCTTTCTGAAATCTACATACGCCTTCTTCTCCTTTTTTGTCTCCGTAGGCAAGTCAAATAATATAAGCACCCACATAATACGATATTCACTAAATCGGTTCATTACATTTTCGGATAGAATATTTTACGTAACTCTCCACTAAAGCATTTGTACAAAGAAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATATTTGAACCATTAGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //