Array 1 57-686 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000042.1 Latilactobacillus curvatus CRL 705 contig00042, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 57 36 100.0 30 .................................... GTGTTACGTTATCAAATCCCCAACTGTCCG 123 36 100.0 30 .................................... AGACACTTTTGATTATGAGTGTTTTGTGGA 189 36 100.0 30 .................................... TGCTAAAACGGAATATCTTCGTCAGCAACA 255 36 100.0 30 .................................... AAATGAATTCCCATTGAATCAGTTCCATCA 321 36 100.0 30 .................................... TGCTGGGTGGTAAAGCTTAGAATTCATCTT 387 36 100.0 30 .................................... CCACGGATTGTCCGTATACGTAGTTGTGAA 453 36 100.0 30 .................................... TAACGCTCGGTACAGTTGGCTTAGTTGCCC 519 36 100.0 30 .................................... TAATTTCATTTCTTATCCAGCTCCTTTTTA 585 36 100.0 30 .................................... AGAAGTTTACGTAAAAAGACAGTATCCGTT 651 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Left flank : ACATTGATTTGATACTCTTCTAAAACATAGGTAGACGAGGAATCGCCTTGAATAGAG # Right flank : CCGTCGTTTTTTCATCAGAATTTCATTTTATTCATAGCGCCATTCGACATAATCATTATCGATGTGATAATAATAACATTTCTGGTACTGATCAGATTTAACCTCTTCTGAAAATTCAATGAGAAAGAGTTTCACATTCAATGTCGCCACCAACCTCACCAATTCATTAAATTGGTTGATACTGAGATAGTGCGAAACGTTGATCAACGTGATTATTTTTGATTCATTTAACTCTACTGCTGTCTGTACTATACTCTCAATTATACCATATGGGTCATGTTGGACGACAGTCGAAAATTGTAAATTATAGAACTTAATCATTCTTTGAAGATCCCATTCCTGATTGACATCTAAGGTCAATTCATACATAAAGGCCGCATCCAAAATCGTTGAACGAATCTCACTATCTAACTGAGTTAATTTCTGGCGCTGCTGATCCGTTAAGTCGGCGGCGAATTTTTTAATCAACCGATTTTGAAATAGATGATTCAAATTAATTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 663-99 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000125.1 Latilactobacillus curvatus CRL 705 contig00125, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 662 36 100.0 30 .................................... TTAAAAACTTTGCCAGAGAATACTCGCGAA 596 36 100.0 30 .................................... AAAGTAGCATGTAAAGCGCAATGCCAGACA 530 36 100.0 30 .................................... ATGAAGATACGGATGATTATGGCGACTATG 464 36 100.0 30 .................................... CCCTCCATCCAAATAAAAAGCGACTATTGT 398 36 100.0 30 .................................... AGGTGCATCTAGCTTGCTACTTGGTGCTGG 332 36 100.0 30 .................................... GAGTTTTTTCAACAAATCGCGTGCTATCCG 266 36 100.0 30 .................................... CATCAAATAGTTTAGTCGTCTTTTCATAAT 200 36 100.0 30 .................................... TAACTTTACTTTGACCACTTCTATCTTGCG 134 36 80.6 0 .....................C.C..A.C...GT.T | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 97.8 30 GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Left flank : GATGCAATAGATTTTCCTTACGCTGATAA # Right flank : TTTGGTACATAAATTTCTGAACAGTTGTGCCATAATTAATAAAACAAGATAGGAGCATTCCAATGAAACGATATCAAGATGATTTTAAAGCCAGCATTA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 30-858 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000119.1 Latilactobacillus curvatus CRL 705 contig00119, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 30 36 100.0 30 .................................... TCTTCTGAGGTAACATCATCCAGGCGTCTA 96 36 100.0 30 .................................... CAGGGCAAAGTGATATAAACCCGTAGCAGT 162 36 100.0 30 .................................... TGTGGGACGTTACTATCGTAAGTATTAGCA 228 36 100.0 30 .................................... GGGTTTTAAAGCTTGTTCCAGCTTGTCTTT 294 36 100.0 30 .................................... TGTAGAAGTTGTCTTCAACCCAAATTGTTC 360 36 100.0 30 .................................... TTGAACAATTAAGTTTAAATGACGTTTTAG 426 36 100.0 30 .................................... TAATGAAATTCAAGGGATGGTTTCAACGTA 492 36 100.0 30 .................................... CTTCACCCATCTGTGAACTAGCATAGATTC 558 36 100.0 30 .................................... TCGCCTAATTATGTATCAATCTCTTACTTA 624 36 100.0 31 .................................... GATGGCGCCAGCAACAACCGCAACTGCAGCT 691 36 100.0 30 .................................... CGGTTGTTAAACCCTTGCGGTTTCAAGTAA 757 36 100.0 30 .................................... TAAGCCGTGCCCACAATGCAATGCTAATTA 823 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : AAGATTCCTTTAATGAGAATTGATTGTCGG # Right flank : AAATCAACGATACTTTTGACCAATTCAACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 925-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000116.1 Latilactobacillus curvatus CRL 705 contig00116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 924 36 100.0 30 .................................... TGCGTTACTCAACTCTTTATTGACACGGTA 858 36 100.0 30 .................................... ATGCCGCAATTAATTGAACAGCTGCCCCCG 792 36 100.0 30 .................................... CTCGTGCAGTATAATCACAGCCAGCCATTA 726 36 100.0 30 .................................... TCAACGAAAACCCATTACGTACAGTTACAA 660 36 100.0 30 .................................... GGAAGCCGATTTCTTTTGGATTGATGACCG 594 36 100.0 30 .................................... CAGATGAACCAATCAATAAAGAACCAGTCA 528 36 100.0 30 .................................... CTGCGACTATTACTGGCTTAGCAGCTGGGA 462 36 100.0 30 .................................... AACACCTTGTGCCTGATGGTCTAATGGACG 396 36 100.0 30 .................................... CAGTAGTTATTTGTCACGCGTGTGCCGTCA 330 36 100.0 30 .................................... TCCAGCACTAAAGCCGCTAACCCGCTAGCA 264 36 100.0 30 .................................... TTTCAAAATCTCCTTCATTTCAGATATTTT 198 36 100.0 30 .................................... AGTAAACGAACGGATAACTAGCCGTGTCCG 132 36 100.0 30 .................................... ACGGCTATTAACAGTTGGTACGAGTCTGGT 66 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : ATAGGAGCAATGAGTAGTTCAACATGATGCGGTCTGACTGATACTTCATAAC # Right flank : CCATATAATTTAAACATTAAGTCGGCACCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 31-1122 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000110.1 Latilactobacillus curvatus CRL 705 contig00110, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 31 36 100.0 30 .................................... TAACCCAATCAAACGGGTTCTTAGGTGGAT 97 36 100.0 30 .................................... TATCAGGTTGATATTGTAAATATTCAATAT 163 36 100.0 30 .................................... TGGTGAGTTTTAGTAAAAATCCCACAATAA 229 36 100.0 30 .................................... TCAAACTACTATCACTAATGGTTGATGTAT 295 36 100.0 30 .................................... TAATACAAGATTCTAATACTTTGACAGGTG 361 36 100.0 30 .................................... TAGTCACAGCACTAGTGAATATACAAATAA 427 36 100.0 30 .................................... TAGTCACAGCACTAGTGAATATACAAATAA 493 36 100.0 30 .................................... ATATTAGAGGGGGTTACAGCGATGTTTTCG 559 36 100.0 30 .................................... TCAAATTGAGTTCCATCTTCTTTTTCAAAT 625 36 100.0 30 .................................... CATAGGTAGAATAGAATAAGCATGGTGCAA 691 36 100.0 30 .................................... TTAAACAATGATTTAATTTTGTCAGGCTTA 757 36 100.0 30 .................................... TTTCCTCAGATAACACAACCCACTTGCTAC 823 36 100.0 30 .................................... AAGTATAGTCAACTATATAACCACCGTTTG 889 36 100.0 30 .................................... ACATAATTACCTCCTAAAAGTCAAATCCAA 955 36 100.0 30 .................................... TCTGCTGTCCTTTATTGTAAGCCGCCGACA 1021 36 100.0 30 .................................... AAGATGATAATGGTGAAAACAGAAATGGTA 1087 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Left flank : TGGTGATAACGAGTTCTTACACCGTGATTAG # Right flank : AATATAAATATAGAAATGAGGAGGGATATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 1976-29 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000094.1 Latilactobacillus curvatus CRL 705 contig00094, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1975 36 100.0 30 .................................... AGGCGAACAGCAGTTGTTTTACGACAAATT 1909 36 100.0 30 .................................... AAACCACATCCGTTTTTGCTTGTTTCGACA 1843 36 100.0 30 .................................... CGTAAGTGGTTTTACTGATAATAAATACTC 1777 36 100.0 30 .................................... TGTGCTAGGGTCTGAGCCGTTGTTGCCGTT 1711 36 100.0 30 .................................... TAGCCAAGACCAGCGTATGCTGGATCGTCA 1645 36 100.0 30 .................................... CACCTTCCTATATATGTAACCAGCAATTTA 1579 36 100.0 30 .................................... GCAGATGTTTCTAGAAGGTACAGAACCTGA 1513 36 100.0 30 .................................... TGCTTTTGGTTCTGTTGGTTGAAATAAGAA 1447 36 100.0 30 .................................... TGCTTTTGGTTCTGTTGGTTGAAATAAGAA 1381 36 100.0 30 .................................... ACAATCCCGAAAGTGATAGTATGACGATTG 1315 36 100.0 30 .................................... ACCAAGTCCAACAGTGTCTGAAACCAGATG 1249 36 100.0 30 .................................... TCATACCTAGTGATCACGAAGGAAGGTCCG 1183 36 100.0 30 .................................... AAAGTCAACGTCCACTAGTGGTTTAAGCAC 1117 36 100.0 30 .................................... TAACACGTGCAAATTGAGTGCCATCCATGA 1051 36 100.0 30 .................................... TAGTAACGGAAACGTTAACGTTAATGGTAC 985 36 100.0 30 .................................... AAAGAGGTGATGATCTAGAATGTACACAAT 919 36 100.0 30 .................................... ACAAGTTGACAGATATGGCCATTAGGACAA 853 36 100.0 30 .................................... CTATCGCTAGTGGGTAATGCCGGACGTAAG 787 36 100.0 30 .................................... CTACCTTTTTATTAAAATTTGTAAACTGTT 721 36 100.0 30 .................................... TCTGCTTCTTGTAAGTGTCAACGTACAATT 655 36 100.0 30 .................................... GCTGGTAGCTGGTATTGATTGATCCTTGTA 589 36 100.0 30 .................................... TAGCCTGTATCAGTTTATTAATTAACTCGC 523 36 100.0 29 .................................... TTGCTCGATTAACCTGAGGAGTGCTTTTT 458 36 100.0 30 .................................... TATATCTAATTGAATTTTTAAAAGTGCGTG 392 36 100.0 29 .................................... AAAAGCCTGATTTATTGGGCTTTTTTGTG 327 36 100.0 29 .................................... TGTCGGACCAAGACGAACAGGGCTTTTTA 262 36 100.0 30 .................................... TGACACGCCAACTGAAGACGGGTTCGATGT 196 36 100.0 30 .................................... TCAAACACTTCAGCATTCTTAAAGTTGGAA 130 36 100.0 30 .................................... GACTGTATTGCAAAAAATGCCGAAGTTATA 64 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 100.0 30 GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Left flank : ATAGGAGCAATTTGATACTCTTCTAAAACAGCCGAATCGAAAGCTGGTTGCAATTTGT # Right flank : CTTGCTTTTCAAGATAATAGTAACTGACC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTACTCATTGATTTGATACTCTTCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 1-235 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000068.1 Latilactobacillus curvatus CRL 705 contig00068, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1 36 100.0 30 .................................... ATTGGTTTAAACAATATAAAAATACTGTTA 67 36 100.0 30 .................................... CCAGTCAGCTTTCACATGATCGATAGCATA 133 36 100.0 30 .................................... GGTTAGAAAAGGATAATCATGAGTTAAACA 199 36 94.4 0 .............................A..T... | A [229] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 98.6 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : | # Right flank : CCTATTTCCTGTGCGAATCTATTGAAAAAGATCACGTTGTCCGCGTGGTCTTTTTTCATGCATTCAAGCATTGAAAACTGTTCTCAATTAGCATAGAATTAAGAGCGTATAATAATTGCTAGAATGCGATTCTTGGAGGGTCATCTATGTCTAAATTAGAGATTATCGATTTGCACGTCGGCATCGACGGTAAGGAAATTTTAAAAGGTGTTAACCTGGAAATGAACACGGGTGAAATTCACGCGATCATGGGACCTAACGGGACTGGGAAGTCGACGCTTTCGGAAACGATTATGGGCAATCCCAAGTATGAGGTACTACAAGGTCAGATCAAACTAGATGGCCAAAATATTTTAGAAATGCCGGTTGATGAACGCGCCCGTGCGGGGTTATTTTTGGCGATGCAATATCCTGCTGAAATTCAAGGGGTAACGAACGCTGAATTCATGCGTGCGGCGATTAATGCACGTCGGGCTGAAGATGATCAGATTTCAGTGATG # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 1-289 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000137.1 Latilactobacillus curvatus CRL 705 contig00137, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ======================================== ================== 1 26 100.0 40 .......................... CTTCTAAAACTTTCTCACCAATTGCCCCAGTGTAACTATA 67 26 100.0 40 .......................... CTTCTAAAACTAAAGCTTGAAGGTTGGGCAAGAGATGGCT 133 26 100.0 40 .......................... CTTCTAAAACTACGCAGCATCGTGAATATAGGTGGGACGA 199 26 100.0 39 .......................... CTTCTAAAACGGTGTTAATAAGTCAGAAAGAAAGTAACA 264 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ======================================== ================== 5 26 100.0 40 GTTGAACTACTCATTGATTTGATACT # Left flank : | # Right flank : | # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTACTCATTGATTTGATACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 330-1943 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000097.1 Latilactobacillus curvatus CRL 705 contig00097, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 330 28 100.0 33 ............................ TATCACAGATTTTGATCAAGAAGAGAATATTAC 391 28 100.0 33 ............................ TGATGAAAGTGCGGTGCCATTAGAAGAAGCCTA 452 28 100.0 33 ............................ CGTAAACTTGAGTTTGCGCTCACCATAACTTTG 513 28 100.0 33 ............................ TAGGTTGTATACCTTTTCTAATTCAATCATTTT 574 28 100.0 33 ............................ TAAATCATACGCCGCCGCATCTTGATTGCTAAA 635 28 100.0 33 ............................ TATAATTGGCATAGCCTTTTTTAAATCGATTAG 696 28 100.0 33 ............................ TACCACACTTTAAAAATGGTACTGCTAATAATA 757 28 100.0 33 ............................ TATTAGTAACTTTAAGCGAAACAATCCCAAGAT 818 28 100.0 33 ............................ TTTCATCCGGTGGTGATGAACTTCGTAAATATA 879 28 100.0 33 ............................ CAAGTAGCTCCGAACTGCATCTTCACCTTTCGA 940 28 100.0 33 ............................ CGGTAAGGGATTCGAAGATGTAGCAACAGATTT 1001 28 100.0 33 ............................ TGCGAGACTTTATTATTGTAGTAATATGTGCAT 1062 28 100.0 33 ............................ CCATTGAGTCATAGCTACATTTCCGCTACCATT 1123 28 100.0 33 ............................ TCTACATCCAACTCGGTTAGGTTATCAAAAAAT 1184 28 100.0 33 ............................ CGGGCCGACCAATCCTAAGACTAGTGCCATTCC 1245 28 100.0 33 ............................ CTTACCGTGCCGGACGTACTCGTCCCACGATGG 1306 28 100.0 33 ............................ TTGTGGTTAAATCAACGTAATCAATTGATTTAC C [1315] 1368 28 100.0 33 ............................ CATTTGAAGATTAATTCATAACTGGCGATTATA 1429 28 100.0 33 ............................ TAAACGTCTGTTCCACTTAACTGACTCGCCTCC 1490 28 100.0 33 ............................ CCATACCAACATAAACCACGGGCATTAGACTTA 1551 28 100.0 32 ............................ TAAGTTAGATATTTTTTAGAAGATAGTAGTCT 1611 28 100.0 33 ............................ TAAACGGCATGCTAGAAATTCAAATCCACTAAA 1672 28 100.0 33 ............................ TCAGAGTCAATCAGATCAGCTACAATCAATCAG 1733 28 100.0 33 ............................ CTGCGGATAATCGCCACTAGCTCGTTGTTATCG 1794 28 100.0 33 ............................ TATTACCGGTTACTACCGTGCTGACGACATAGA 1855 28 100.0 33 ............................ TTAATTAAGCCTTTGTTGTGGTTGTCGTGGTAG 1916 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 100.0 33 GTACTCCCCATGTATATGGGGATGATTC # Left flank : GTAATTTGCCGGATCAAACAAATATTTTTTATCGACGAGATATTGGTAAGAACTCCATTTAGTTCAAAAAGGTAGAAGTAAGATTTCGTTTGAAATATTACTTCTACCTTTTTATTTGGATCGACATCTTAGAACTTTGAGTTTTTGAAAAATTTATAGACATAGATATTTAGAGTATTTTTTATTAGTCATTGAAACTATTGAAAATAGCGTTGCATAGAACAGGAAAGAAAGGTATGATTTAAGAAATTGGTAATCTTATTGGACCAGTTAATAAAAATAAGTGGTTTTCTAATTTTAAAATGTTGATCTAACAGTCTTTTCTTAGTG # Right flank : TACACTTGAAACGAAAAAGCAAATATTTTTTAAGTACTCCCCATGTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCATGTATATGGGGATGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 10107-10501 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGBU01000051.1 Latilactobacillus curvatus CRL 705 contig00051, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10107 29 100.0 32 ............................. AAAATCGGAGTTAAGCCATTTATTAATACCGA 10168 29 96.6 32 ............................C TAAATTAACCTCATTGTACCACGAGACAACTA 10229 29 100.0 32 ............................. TTTATCGCTTAAAGCGATTGAATTACCAAAAA 10290 29 100.0 32 ............................. AAAGCAACTGCATGGTCAGCCGCCCCCGAAGA 10351 29 100.0 32 ............................. GCTCAGTCCTCCATCAATTTTAGCGATATAGG 10412 29 100.0 32 ............................. GCATATGAAAACATGCCAGAAGAAGACAGACG 10473 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.5 32 GTGCTCCCCATATACATGGGGATGATTCT # Left flank : TACTAAAGCAGAAATTATTTCAATTGGAGCAGCCAAGATAATGCCCGACGGACAATTACTGCAATTTGAAAAATTAATTCGAAGTGTGGATTCAGTACCATCCAAAATTACTGAACTTACCGGAATTACTTCAGAACAGTTGCAAAAACAGGGTGTTGAGCTTTCATTAGGATTAGAGGCATTGTCTGATTTTGTTAAGGATTCAGTCATCATCGGTTATAATCTTGAATTTGATGAAAGGTTTTTAACGGAAGCATTGCGGAAAGTTGGAAAAACCGAATTTACTAACTCTACCCACGATCTTATGCCAATAGTAAAAACAACTCAGGAGTTTTTAGATAACTATCGTTTAACGACTGTCTTGGAAGTATATCAGATAGAGAATTTAGATCCACATCATGCATTATCTGATGCTCAAGCTACGTTGTCTTTAGCAGAGAAGTTAATAAAAAACGGCAACCTTGTAATTTGAAAATGCCTATGTAAAGGCTTTTTTTAGT # Right flank : TGGTACAGACGGTGGAACTTGGATGAACTGCATTGTTGGTACCACTGATACCACAAAGAGACATTATGTGGCAACCATCTTGCTGGATGGGTTTTCGCAGCAAGGTGTTTATATCCGCCTTGATAATATTCCTTCGACATCCACTATTACATTTTCAAATATGAAACTGCAATTAGGTTTAAATGTGGTGGTCTCCAATCTTTCTCAAGCCGTGGATGGTATGCGACTTGATATGGTAGATTGTAAAATTAATCCGAACGCTGTTCGGACAAAAAGATCAGCTTCCTTTAAAATGGTGTTTACCACAAACCCATCTTTTAGGAGCTGATCTTTTGTCTAGTATAACCTATTCCGAACGAATTAAAATCGAAACCTTTTGTGAACTAGGGTTGTCCAATATCCAAATGGGCGTTCGGCTGAACCGATCACCGTCAACAATTTCTTATGAATTATCTCGATATCAACCTTATCAGGCTGAATTAGCACAAACAGATGCCGAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCATATACATGGGGATGATTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //