Array 1 37375-38540 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZQF01000046.1 Dickeya dianthicola strain CFBP2982 contig_46, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 37375 32 100.0 35 ................................ CTGAGGAGCACGTATGGTACAGTCGAAGTTCGAAC 37442 32 100.0 35 ................................ GATAAGAGGTCCGAGGGGTATCAATTCGACGGCAA 37509 32 100.0 34 ................................ CTAAGCGAATCGTCCAAGAGGAGCAGGTGCAAGC 37575 32 100.0 34 ................................ TCAGGAGCTGTGTGACCAGCTTCAATCCCCTATC 37641 32 100.0 34 ................................ GCGGTGGAACAGACTCGGAAAGCGTTGAAGATTT 37707 32 100.0 34 ................................ CGCCATCGATGCTGCCATCCATGCCGCCGCGCAC 37773 32 100.0 35 ................................ GAGTAGTACCGCTCTTTAACAATCTGGTTAGTGTG 37840 32 100.0 33 ................................ TCTCTCTCATAGTGACAGTCTAAATGAAACTCT GCGGGCGCGTG [37863] 37916 32 100.0 33 ................................ AAGCTAATCGCTGTTAAAGCTATCCCTGCACAG 37981 32 100.0 36 ................................ AGTGAAACTGTAATCATGTTATCCACTCCTTAATCC 38049 32 100.0 33 ................................ TCTCTCTCATAGTGACAGTCTATTGATATTTTA 38114 32 100.0 35 ................................ CAAGGGGATTATGATGTGTTTTGAGTACCATGAGG 38181 32 100.0 35 ................................ AAGAACAGCCTACCCATGCCTACAGCCTACCCAAC 38248 32 100.0 33 ................................ AGTAGTTTGCCAGGGTAAGGAAATCACCGCTCT 38313 32 100.0 34 ................................ TGGATAACCCCAAAGGCGTTGTTGATCAAATCGC 38379 32 100.0 34 ................................ TTTGAGTAGCGCCAGCGTTTCATCACGTACCGCC 38445 32 100.0 33 ................................ CAGTACGAACCGTACATCTTGTCAACTAGCCAC 38510 31 81.2 0 .....................-AC....C.TT | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 99.0 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : AACAGACAACCGGAGCAGCCCCTGTATGATGGTACTCATCACTTACGATGTATCGCTGGAAGACGCCAACGGCCCGCGCCGCCTGCGGCAACTGGCGAAAATCTGCCTGGACTATGGTGTTCGGGTGCAATACTCGGTATTCGAATGCGACGTTGATGCTGCACAGTGGGTGGTTTTACGTCAGAAGCTGCTTACCACCTACGACGAACGGGTCGACAGCCTGCGATTTTATCGCCTTGGCAAGGGCTGGCGTGATAAAGTTGAACACCACGGTGCCAAACCGGCGCTGGATATTTTTGGTGATACCCTTATCGTGTAACACTGCGCCAACCCCCGGTGCTCATCATTTTCCCGGCCGGTTGGCGCAGCCTTATACAATTGAATCATAAATGGTTTATTTCTTCCCTCCATCACTGCGCCCCCCAATTCCTTCTCGCAGACATTACGTTGGCGTTATCTCCACGCTGACGCTATGCTACAAGCGCCTTGCCCGCAAGGCA # Right flank : TGATATCGTTATTCGCCGGTTAATGCTGCGAAGGCGGTTCCGACTCAAACAGCGGCAACGGCTTACCGATGATGTAGCGCTGGCGTAAATGCGCGGATAACACATCCATCAGCATCACCACCACCACCAGAATCAGGGTGATGAACATCACCACATCCCAGTTCCACAGTCGCATGTTTTCGGCGTACACCAGCCCGACGCCGCCGGCGCCGACGAACCCCAGCACCGCCGCCGACCGCACGTTGGACTCCATCTGGTACAAGCTGAGCGCCAGAAAGGTGGGAAACGACTGGGTGAAGATGCCGAAGCGGTGTTTTTGCAAGCTGTTGGCGCCGACCGCGCCAAGCCCGCGGCTGGGTGAGCGTTCTACCGCCTCGTGCCCTTCCGCGTACAGTTTGCCGAGCAGGCCGGTGTCCTGCATCAGGATCGCCAGCGCGCCGGACAGCGGCCCCATGCCCACCGCCCGCACAAAAATCAGCCCCCAGATAGCCATGTCGATG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //