Array 1 89612-89278 **** Predicted by CRISPRDetect 2.4 *** >NZ_WSSS01000002.1 Pantoea agglomerans strain R1 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 89611 29 100.0 32 ............................. CCCGTGAGCTGGGGCTACGCAAAGCGCCTGAG 89550 29 100.0 32 ............................. TCTGACTGTACGTCATCATTGCCGATTGATGT 89489 29 100.0 32 ............................. TTGGTCGCCTGACTATTTCACCGGAGATGTTG 89428 29 100.0 32 ............................. TCAGCGTCAGTGTTGCGCCGGTAGCAACTGAT 89367 29 100.0 32 ............................. GCAGCGAGCTGTAACCGGGCAGGTCTGCTCAT 89306 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GGGCATTGGTTGATGTAGATGTCATTCGTTTACTGGGCGGCTCTGAAAAAATCAATGTCACTTTACCCAGGTCGTTAATTGATCGGATTGATCGTTGTGTGGCTTCACACCCGGAATACAAAAGTCGCTCGGGATTTCTGGCTCAGGTAGCGCTTGAGCGTATTACTGCTCCGATTAACAGGCCTTAAAAGTAAGTCTGAGCGATAGCTAAATTTATTGGTGGCAGAAGAATCAAAAGGCACAGTTTATGAGTTTTTTACCCCTTAAGCCCCTGCCATGATCTTTCTCCAGTATGGTCAGGTTGATTTCTTTGATGATGCTTTTATCCAGATTGATAAAACCGGCGTAAGAACACATATTCCGGTGAATCTGGATGGACTGCGGCTGATTCCCTTTCTGACTCTTATAAATCAGTGAGTTACTGATCTTTAAAAACCTGAATTTTTGGTGATTTTTTATGCGGGTAAAATCACCATATTTTACATCTACATACGTTAAGA # Right flank : CCGTGGTGTTGAAGTTCTGCTGTGACATGTTGGTGTTCCCCACACCAGCGGATAACACTCCGGCAACTCCCGACCGATATTATTTTTAATGCCCGGTCTATCCTTCACAAACCACGACTAAACCTTCATCTAACCACGCATCTCCCATGCAGCCACCCGTTCAATAAACATCTGTGCCAGTGCAGCAATGGCGCTGTTGCCGGGCAGTCTCTCTTCATTGATATACATTACCAGAGAACTACTGCGTCGGCGGCCCTGTAACAGCGGCAGGGGACGGAGCTCACCGCTCTCTAACAGCGCGGCGATATTCTGTTCCGGCAGCCAGCCATAACCTAACTGATGCTGGACCGCTTCAATGGCTGCCGACAGCGTCGTGAATGACCAGTTCTCCGCCTGATCGCCATTGACCTCCGACTGCTGCTGTTGCTGACGATCCAGAATGGTAATGCAGGGCCAGCGTGCCAGCGTAGCAGCATTAAGCGGGGCGGGTTCGTGGTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //