Array 1 15975-17198 **** Predicted by CRISPRDetect 2.4 *** >NZ_VYWT01000029.1 Lactobacillus jensenii strain UMB572 NODE_29_length_18592_cov_12.743623, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 15975 36 100.0 30 .................................... TTTAATAATTGATATGATAAAAAAATTTGG 16041 36 100.0 30 .................................... TGGTGGAGAAAAAGATGGAAAATATGTCAA 16107 36 100.0 30 .................................... AGTTTAAAGAATTCGAAAGTGCTTTATTTT 16173 36 100.0 30 .................................... TTATAGAGTTACATTAAGTGATAGTATACG 16239 36 100.0 30 .................................... TGGTGGGCATTTAAGAGTCTTTTCAACCAG 16305 36 100.0 30 .................................... TGACGAAATGCAAGAAGAATTGCGAGAAGA 16371 36 100.0 30 .................................... AGTAGCTCAACAACTTCAAAGCGAAGTGGG 16437 36 100.0 30 .................................... TTTTTGAGCTGTTTTATCGAGCCAAGAAGG 16503 36 100.0 30 .................................... TGTTTAAAGTAGTAAACAAGACTATTGAGC 16569 36 100.0 30 .................................... CTCTATTTTAATCTGCATACATACATGTAA 16635 36 100.0 30 .................................... AAGACAATACGTAATAAGGATATTGTACAA 16701 36 100.0 30 .................................... AATATATCAAGCCTGAAGCATTAGATGGCT 16767 36 100.0 30 .................................... CTAAAGCTTTTTCAGCATCATTTTTAGTGT 16833 36 100.0 30 .................................... ACTACTTTCAATTTCTCTGTCAAGCTTCTT 16899 36 100.0 30 .................................... GGCTAAAGACAATAAGATTAATGTTTCTAA 16965 36 100.0 30 .................................... ACTACCAGAATGGGCAGTTGCAGAAAAGAT 17031 36 100.0 30 .................................... GAAAACTTGAAGTCGCAACTCAATAGCGAG 17097 36 100.0 30 .................................... AAAAGTAGTCGATGAATATTTAAGGTTAGT 17163 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.9 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCATTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG # Right flank : AGTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //