Array 1 9093-9306 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMW01000050.1 Acetobacter indonesiensis strain 5H-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9093 29 100.0 32 ............................. ATAAGCGGAAGCCAGCCAAAAATGGCAAAAGC 9154 29 100.0 32 ............................. GCCATGTCAGACGCTTTCCGATCCGTGATGCG 9215 29 100.0 32 ............................. ACCGGCCAGAAATGGAGGGGCTGTGCGATTTT 9276 29 79.3 0 ............T.T........A..TAC | AA [9297] ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGTCCTTCTGGCTGGTGGCGCAGAACCACCGCCTGCACAGCCCGAAGCAATGCCTGTGGCCTTTGCTGACCCGAAAGGACTGGGTGATGCTGGTCATCGTGGTTGAAAACGCGCCGCCGCGTTTGCGGGGGCGGCTGGCAGTCTGGCTGCTGGAGGTCCGGGCTGGCGTTTACATAGGCAGCTACGGACGCCGAGTGCGTGAAATGATTTGGGGACAGGTCTGCGCCTATATAGAAGATGGAAACGGTGTCATTGCCTGGGCCGCCCCGAATGATGCGGGTTTTGAATTTGATACATGTGGCAAAAACCGCCGTGTCCCAGTTGATCTGGATGGACTGCGACTAGTTGCTTTTGACCCCGAAGCTGCATTGCCAGCCCAACAGGGCCCAGCCACAACCATACTTCCCCGCCGACGCGGAAGAGGGTAGAATACAGCCTGCGTAATCGGTAGTTTCTTTGACAACAAAATAATCCTTTGAAATCAACTCTTTCCAGAAAGA # Right flank : CAGTTAGAACGTGAAAGCCACGTTAGCGTTCATCTATGATGCTTTTGTTGCCATATAGGCGTGAAAGACACCGAATGAGGTGTGTTTGCGGACGTTTGAAAATCCGGCCTGTTTCAGGTTCTGAAGAATCTGGTCAGGGGGGATGCACTGTTCGATAGTATCCCAGTAATAGGCCATCAGAGTGCGGCTTTCGCGGGATGCGGTAACGCCAGACAGGAAGGGCACTACTTTTCCCAAGTAAAAGCGCAGAAACGCTTGCACCGCAGGGGAACGGGCGCGACCGATTTCAAGAATAAGCATGTTACCGCCGGGTTTCAGAACCTTCAGATACCCCGTGAATGTTGCGTTCAGATCCCGAACATGACGCAGGGCATACCCCATGCTGAGCATATCCATGCTGTTATCGGCAAAAGGCAGGGCTTGCGCATCGGCCTGCACAACCTGAATGGGCAGTTTGCTTCGGCATTCTGCTAACATACCTGCACTCATATCCAGCCCGA # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 64801-65195 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMW01000050.1 Acetobacter indonesiensis strain 5H-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64801 29 100.0 32 ............................. TTGGTCGATCTACTCTGTATAGAGCGTTGCGT 64862 29 100.0 32 ............................. ACGTTTTTTCCCACGGGTTGAGGATCGACACG 64923 29 100.0 32 ............................. AAGCCAACGCGCAAACCCAACTGCCTCTCGTT 64984 29 100.0 32 ............................. AGGGGGCTGTCATTTACGGCGTCTCTTTATTC 65045 29 100.0 32 ............................. TTGCGGAGCAGCGCAAAGGACTGGCCTGCACA 65106 29 89.7 32 ........T...C.T.............. ATGGGGTGGAAGCCCCTTGCCTGTAGTGAGGA 65167 29 75.9 0 ............G.T..A.....A..GTT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.1 32 GTGTTCCCCGCATACGCGGGGATGAACCG # Left flank : AACGCACCAAGAGCAATAATCAGCCCGCTATCGCCCAGTAGTTTACCCGCCCCAGTCTGAAACGCTGTCAGCGCACGGGCAGGTGCCAACCCTACGCAGGCACTGAAGACAAGCGCCCCAATCAAAATGCCCAGAAATGGCGGAAGCTTTGCCACGCTAATGGCAAGAATAATCACCAGCAACGCAAAAGCACATGACAGGACTAACCCTGTATCGTGCGTCCCCCAGACAACAAGAAAATGCAAGCCCGTAGCCCCTTATGTTCTTCTTTTTGGGCTATCTCACCCCATCTTGCGGGCTGAATACACATCAGGAATGCGTGATGTGTGACGTCGGGCGTATTATCCTGACCTTTGCTTGCAGCAGCATACCTCATGGTGCGTTAAGGCTGTCCCAAGGCCTCTTTCGCGAGGGTAAAAAACGAGCTAAAAAAGGCGTCAAAGCTTGGTAGATTCTTTGACAACAAAATAACCCTGTAAAATCAAACTATTCCAGGAAGT # Right flank : TAAGTTATTCTTGAGGGTCTGGAAGTCAGTTTGCAGGGTTATGTGCTTTAGAAGACCGTATTGATGGCAAATTGAGGGGCTATTTTTATGCTGGTGTTATGGCCTGCATAATAAAGGGATGCCCCGGCAATAATGCCCCAGTTGGCGTTCCAGTTATATTCAAATGCGGGGGCTACCTGCCAGTCGCCTGACGGTGCGCCGGTGCGGTCTGTATAGCTTCCTGCTTTTGTGTGGCCCCACACGCGGGACCCATTGGCCCAGTCGCGCGCGACGTCAATTGCCAGAAGCCATTGGCGGTTAATCCCGTATTCAAGTGAAAACCCGGTTTGTCCGCTCATGCCCGGGCGGCCTTTGCCGCGAAAGCCTGTTGTGGTGCCATAGGTGGAGGTATCGCGCACATCTGCTGCGTTCAGCGCGCGTCTGAACCAGTTCCAGACGCGCAACCTCAGGTTGTGGTTGCCGGGTAGTTTATAGGTTGACTGGCTCATTAACGCCGTGCG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 76861-77133 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMW01000050.1 Acetobacter indonesiensis strain 5H-1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 76861 29 100.0 32 ............................. CTGCACGGAGAGGTTGCGTTAATCGGGGGTGG 76922 29 100.0 32 ............................. TGCTGTCTGCCTCAATCTCGATGCTGGCCAGA 76983 29 100.0 32 ............................. AACTTAATTGTTCATCCCCGGCCCATTTCATC 77044 29 100.0 32 ............................. CGCGGGCGCGTTACTGTGACGGCGGCGTCTAT 77105 29 82.8 0 ..............T........A..GAA | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGTCGCTACTGCTCATCCCGATAAGGGAGATCTGGGCGTTGTGCGCGGTGCGGGAATCAAAATATCCACACCCGGTTAATCCGATTACGGGCAGCATCAGGGCAAAAGCCAGTTTCTGTCTTTGCGCGGCACGGCGTACAGAAACACGAAGCACCACAGAAGCAGCACGGGTCACAAAAGGAGCGGTCATGGAGGGCAGGGAAATCCGATTATAAAGAAAGAACACCACAGAAAATACAGAACTGCATAACACAGCCAGCCTGACAGCCAGTATGCCCAGCTACCGCCCGGTGTTTATCTGGCCACGAGTGTAGCATTTTATACCGATAAGGGAATGTCACAGCCACAAAAAGCATCAGCGCATGTGCTGCCAAGCTCCGATTTTTAGCGGATGCGCCCTCTTTCCCCATACGGCGGAAAAGGCTAAAAAAGAGCACAGAAATGCTGGTAGACTCTTTGACAACAAAATAACCCTGTAAAATCAAACTCTTCCAGGAAGA # Right flank : AACCCAGCTAGTATGTGTGGGCTCTTGCTGGTGGGGCGTATCTGCCGCACTCTATGGGCACTTTTTGTGTGTAAGGAGCGTGTTATGGTGGCATTTCGTCCAGTTTTTAAGGCTGTGGCTTCTCTTGCTTTTATGGGGGGAATCACATTGGCGGCTTTTCCAATGCCACAGCAGGCGCTTGCGGCAACAATTTTGAAAGTGCCGGCCGTGCCTGCCCCCATGACTGCCAGCACCGCTGCTCCGGGTGTGCTGGATTATGACGGTATCCCGACTGTTGAGCACGCATCCGCCGCCAATGTGGCTGGCCTTATGTCATACTGTTACAGCCATAAACTGGTGACAGATACGACTGTGCGCTCATTAGGGCGTAAATTGGCTAGCCGCGAGGGCGTAAGCACTAATCCGGCTTATGCTTGGGGTGGCGTAGGGCGTCTGGAACTGGGTGGCCAGACCATGTTTGATGTAGGTAGCCTGAACCGCGATCAGCGTGCCGCTGTTTG # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //