Array 1 14645-11770 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENIQ010000003.1 Corynebacterium sp. CCM 8836 Contig_3_237.514, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 14644 29 100.0 33 ............................. GTCGTGAGGGCGTCGCCAAGATCGTGCCCACTA 14582 29 100.0 33 ............................. ATGCGCGACCCCGACGCCCCCACCACCCAAGCC 14520 29 100.0 33 ............................. GGCCGGATGATCGAATCCTCGCGGAAAGTAGGG 14458 29 100.0 33 ............................. AACACGGCACGTAGGTGCCAGCGCCCTGCCGGG 14396 29 100.0 33 ............................. AACGCGGAATCAAGCTCACGCCGAAGCGCGTCC 14334 29 100.0 33 ............................. ACGGCTGCGTATTCCGCTTCTTCTGAGGACCCG 14272 29 96.6 33 ............................G GAAGTGGAGCAGCGGAGGAATGCCGCCGCGCCG 14210 29 100.0 33 ............................. GTCAACAAAATGGCCACCCCCAGCAAATCTGAA 14148 29 96.6 33 ............................A TGGTGGACTCGCAGGATCTTCGCGACGTCCGAG 14086 29 100.0 32 ............................. TCCACCATGGCGATCCCCTTCGGGTGTGTAGT 14025 29 100.0 32 ............................. TGTGCTGATCGGAGTATCCATCAGGTCTGACC 13964 29 100.0 32 ............................. GGCACGGCGACGATCCCGGCGGGCAGGACGTC 13903 29 96.6 32 ............................G TGGTCGGAGATCCAGCTCTTGACCGAGCCGAG 13842 29 96.6 32 ............................A TCACCACCAAGGACACCCCATGAAAAGCCCCG 13781 29 96.6 32 ............................A TCTCACGGTCCATCGTGATAGCCCTCGTCACC 13720 29 96.6 32 ............................G ACCGCGATGGTGCCCGCGACGTTCCGCGGGAA 13659 29 96.6 32 ............................T GGCCCGGCCACACCGTCCACGTCGAAGGCCAA 13598 29 100.0 32 ............................. GCCGCCGCCCAGGTGAAGACCCGCGAGGATCT 13537 29 96.6 32 ............................G GACCACCACTTTCCGGCGGCGTATCCGCTGAG 13476 29 96.6 32 ............................G CCGCGGCACGCCGAGCCACTGCCCGACCTCGC 13415 29 96.6 32 ............................T GTCCCGGGATCCGGGATCCAGCCCCGGCCGTG 13354 29 96.6 32 ............................A TCAGCTGGCGGAGTCCACGGTCGTGGATGTCG 13293 29 96.6 33 ............................A TCCAACGTCCAACAGCTCGCGTCAGCGCTGATC 13231 29 100.0 33 ............................. TTCGCCGGTCGCTGAGGCAGGCCGGTGAGGATG 13169 29 96.6 33 ............................G GCCGTCGAGATCCTCGAGTCGGGGACGTCCTCC 13107 29 96.6 33 ............................T CGACGAGGCTGTCTTCGGATACCGGGCGACCCT 13045 29 100.0 33 ............................. ACGCCTAGCCGGACGGTCGCGGGGTCCCGCCAG 12983 29 100.0 33 ............................. CCGGACGAAGGGATGTGCGTCGTGATCCACCCG 12921 29 96.6 44 ............................G ACGCCGATTCGACGCCGATTCGACGCCGTAAGACGCTGCTTCAA 12848 29 100.0 33 ............................. ACGACTGAAATCACTCTGCCGTTGGCCACGGTG 12786 29 96.6 32 ..............T.............. AAGAAGTACACGAGTGATCCGCAGGCGATGCT 12725 29 100.0 32 ............................. CCGCGTCCGCTGAGTGGCCCGGCTTTGCGGCC 12664 29 100.0 32 ............................. ATGGCCGAGTTCGTGGGCGAGCGTGGAGATCC 12603 29 100.0 32 ............................. CCGGAATCTGCTACCCATACGGCGCGGCCCTG 12542 29 100.0 33 ............................. TCCGGCGGCTCGGGCTCGATGCGGTGGGCCTCA 12480 29 100.0 32 ............................. GCCGCACCGATACAGAAAGAAGAAGATATGAC 12419 29 100.0 33 ............................. GTGGGGACCTCGGAGCCGTCGGGGAGCATGAGG 12357 29 96.6 33 ............................G TAGACGACCGGCTGCGTGGAGATCACCGCAGGA 12295 29 96.6 34 ............................A CACCGATATGCGGGTGTAGGCGCCTAAGATTCGG 12232 29 100.0 33 ............................. TCACTCAGCCGGGCCTGCGCGTTCGAGTAGGTG 12170 29 93.1 33 .......T....................G TGAACGGACTTGATCCCGCATGATGGAACAGCA 12108 29 100.0 33 ............................. AACACCGCACTCACAGCCGCCGCCATGTTCACC 12046 29 96.6 33 ............................G GAAAACCGCAGTGATCTCTGAGGTATCGCACAC 11984 29 96.6 33 ............................G AAGCTTGCTCGTGCTCGTGAGGACGCGGACGCT 11922 29 100.0 33 ............................. ACCGGCCCGGGGTCCGATACGCCGCACATCGTG 11860 29 100.0 33 ............................. TCCACGGCGCGCTTCGCGTAGGCGATGACCTTC 11798 29 93.1 0 ............T...............T | ========== ====== ====== ====== ============================= ============================================ ================== 47 29 98.3 33 GTTTTCCCCGCCCACGCGGGGATGGTCCC # Left flank : TGACCCGTGACCCCAGACCCGGCCCACCGCCAAGCACGCACACCCAAGCCCGGGGTACAGCAAAACCGGCCCTGACAGTAGATCTGATAAACAAGCCTTGAACAGGCGATTTTACAATCACACCGACCACTTGTAATATTTCACTTCGTTGCCGAGGGGAACAACCCCCACGGAAACAACATGCGCCATTAGCTCAATTGGCAGAGCAGCTGACTCTTAATCAGCGGGTTCGGGGTTCGAGTCCCTGATGGCGCACCACCTCACCCCCACCGGGATTATCCCTGGTGGGGGTTTTCTCATTACAGAAAATATTCTTTCCGGGGCAACCGTTGCCGATGCGGAAGCGAACACCACACACAAACAGCCGGACACACCCCGCGAACCTGGACGAGAAGCAACACCCATCCCACCCACCCATACAGAGCCCGGCGGCACAGTGCCTGACAGACAAACTAAAGCTAAAATGGCCAACAGGGATCCAAACCCCCAGTTAAATAAGT # Right flank : TCGACAGCTAAGTTATGGTGCATCGCTGGCTGGTTTCCCGTACGGGTGGGATGGGGCGGGTTTTGCGTGTGCCAAGTGTGTCGGTGAGTGTCGTTTTTCTCGCTGGCACGGGGTAGTGCCGTGCACGTTGGGGTGTTTTTGAAGGCTTGCCGGTTATATCGCCGGTGGGTGTGTTCTTGTTTTGAGGGGGGAGATGCGTTATCGGCGTGCTCTTCTGCGTCGGGATGCGTTGGACCAGCCTCTGGGTGATCTGGTGGTTTTCTTTGTGGAGGGGCGCATGATCAGTTGCAGACCCTCTAGGTCGGTTGTCGCCCATTCGTGATTGTGCATGAGGATCGAGAATCCTTGTTCTGTGGACTGGTCCGGGTATGTCATTATTGCCCGGCCATTTGTTATTTCAGCGAGGATGATGTCCCAGATTTTCTCTCGTAGGCGTGCGTTGACTTTTCCGACGTAGACACCGCTGGAAACTTCGATCAACCAGCGGGTCAAATAGCCTC # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCCCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //