Array 1 410810-409750 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LLVT01000001.1 Schaalia odontolytica strain XH001 contig_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	====================================	============================	==================
    410809	    36	  94.4	    28	..................G................T	GACTCGCCGCCGATCTGGTGCTGGTGAC	
    410745	    36	 100.0	    28	....................................	CGATGAAGCGGGACGCGGCGAAGCGGTT	
    410681	    36	 100.0	    28	....................................	CAGGGAAACCATGCGCGTCACGCGCTCA	
    410617	    36	 100.0	    28	....................................	CCGTCGCGCACACGCCCAACACCACAGC	
    410553	    36	 100.0	    28	....................................	CGTTCGGTGGTCCGTGGGGCCTCGCTGC	
    410489	    36	 100.0	    28	....................................	TTCTGATCTCTGACTGGATCGAGGCCCG	
    410425	    36	 100.0	    28	....................................	CTTGCGGGGCCAGGGGGCGATCATGCTG	
    410361	    36	 100.0	    28	....................................	ACCGAGCAGATGGACCTCTTCTCCGAGC	
    410297	    36	 100.0	    28	....................................	CATTCGCCGACGACGGCGGCGGCGGCCT	
    410233	    36	 100.0	    28	....................................	GTGTAGGTCTCGTGCGGACGGTGCGCCG	
    410169	    36	 100.0	    28	....................................	ACGAGTCGATTCAGACGACGGTCGACGT	
    410105	    36	 100.0	    28	....................................	AGCGCGCGCGTCTTGCGTGATGGCCTGA	
    410041	    36	 100.0	    28	....................................	TAACCGGCACGATCGTCACGGTGTACTG	
    409977	    36	  97.2	    28	..................................A.	TTCTCAGCGTCGGCGAGTAGCTGCACCT	
    409913	    36	  94.4	    28	.....T............G.................	TACCTGACACTTTTGTCAGTCAGCCCCA	
    409849	    36	 100.0	    28	....................................	CTTTAGGTAGGGGTGAGCTTTGAGGTTC	
    409785	    36	  86.1	     0	..................T.....T...T....G.T	|                           	
==========	======	======	======	====================================	============================	==================
        17	    36	  98.4	    28	CAAGTATATCAAGGGGATAGGTGACTGAATCCCAGC	                            	       

# Left flank :   GATGGACATGGTATTCCTGCCGTTGCCGAGGCCTTGGCCCAGTCGTTCGGGCGCTACGTGGAGGGCGATATCGATCGTCTGAACGTGCTGTCGTGGCAGGGGCCATCGGTTGTGAGCGTGGGAGATTGAAATGGCGGATGATGCAATGTGGTGTTTGGTCATGTTCGACCTCCCGGTGGAGACGAAGAAGCAGCGCCGGGAGGCGACGAGATTCAGGCATGATTTGTTGGATTGGGGTTTTTCAATGGTCCAGTTCAGTGTGTATGTGAAGTATTGGCCTCTGGGTGGGCAAGATCATGCGACGTTGCGGGCGATTAAGAGTCACTTGCCGAGTGGGGGAAAAGTGAAAGTCCTGGGGCTCACGGATCGGCAGTGGGCCAGTGGCCTGCATTTTGTGCGTGCGGAGCGTAAGGATGACGGTCAGGCACCCGAGCAGCTCATGATTTTCTGATGTGTTTTCATGAGAAAACGTTGCGATTTTGGGTAAAACCTATCCACCT
# Right flank :  CTGAGCGGAGATAATCCGTGATCGGAAATTGCCTAATCAAAATGAGCAAACAAAGTGCTCCTGAACGATGTTCAGGAGCACTTGAAAGCGAGAGGAGATCTTGGTACATGGGGTCTTTACAGCCCGAAGCTGAGGGCAGTCCCACACCCGAAGCCGCTGAAGCGGCTTCCTTTGAACGTCTGTTACCAGACGCCCGACGCATCCTCTCGCTAGGTCGATACTAGCCTAAAAGCTGAGTTTTGGTCAATGAGGACATGAACAACGCTCTCTTGCTGACTGACGCCGGTTGATCATAGTTTCCCGCTCTGAGCGGGAGTGATCATCTTCGAAATAGTGCTGGGGTGCGCACGAGGGTGGCAGCCAGCCCACCTGGGAGTGATCCCCGGGCAGGCGGGCCACCCTCGTCGTTGATACGGGCCGCCTGCACGATGCAGACGGTCGCACCCTCATCGCCCTTGGCATTCTCGAGGCGGTCGAAGCCTGCACCCGCGCCTCCGAGA

# Questionable array : NO	 Score: 3.18
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAAGTATATCAAGGGGATAGGTGACTGAATCCCAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.20,-0.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [8-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//