Array 1 63848-67896 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHEL010000006.1 Phycisphaera mikurensis strain DSM 103959 Ga0415308_06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 63848 32 100.0 34 ................................ TCCAGCGAGGCCGCGAGCGACTACGGGTTGGTCT 63914 32 100.0 34 ................................ TGTCCGGCACGCGGCGGCCGGAAGGTCGCATACC 63980 32 100.0 36 ................................ TTCGGGGTGACGAACGGCGACTGGTACGAGATGCGC 64048 32 100.0 34 ................................ GCGTCGGCGTGGGCGGTGGGATGCACCTACAGCC 64114 32 100.0 33 ................................ CCGCAGGTTGAGCGAGGAATGGCACGCGATCAC 64179 32 100.0 35 ................................ TCGGCGGCGTCGAGAGCCTTGTCGAGAGCAAGAGG 64246 32 100.0 33 ................................ TGACGATGGCGGCGCGGAAGACGATGGCCCCTC 64311 32 100.0 34 ................................ CGGTCCCGGACGACGACGACCTGGACGCATGGGC 64377 32 100.0 34 ................................ TCCAGCGAGGCCGCGAGCGACTACGGGTTGGTCT 64443 32 100.0 32 ................................ GTTTTCCGCGACGGATCCAGTTACGCGCCCGG 64507 32 100.0 33 ................................ TCTCTCCGGCGCTCCGGCGCCATCGTGGCCCCC 64572 32 100.0 33 ................................ AGTCTCTGAGCCGGCCGATGGTGCCTGGTACTG 64637 32 100.0 34 ................................ AAGCCGCCGGCGACCGGTGTAGCCGCGGGCGGGG 64703 32 100.0 35 ................................ ATGTCCACCGATCGGCCGGTTCCGCGGACCGTGGC 64770 32 100.0 33 ................................ CGCAGGCGGGGCAGGAAGTCGCCCATCCGGGCC 64835 32 100.0 33 ................................ AAGCGGTCCCCCGCTCACTGGCCCTTGGGCCGG 64900 32 100.0 34 ................................ GCCCTGTAGATCGTGGTCCACCAGCGCTCGGCCC 64966 32 100.0 35 ................................ ACGATGCTGGTTCCGTGCTCCAGCTGGTCCGGGAG 65033 32 100.0 34 ................................ CCAACCCCGGGGCTCATGGCCGGTCCGGGGCGGG 65099 32 100.0 34 ................................ CGTCAACCTCGCGCTCACGCATCTCCCACGCGTG 65165 32 100.0 33 ................................ AGCGGCCCGCCGGGCCGCACCTCCCGCAGACGC 65230 32 100.0 34 ................................ AAGCCGCCGGCGACCGTTGGAGCCGCGGGCGGGG 65296 32 100.0 34 ................................ TCTGACGTCACGCCCTCCCCCCGCACCCGCACGG 65362 32 100.0 34 ................................ ACGAGCGCGGACGAGTCGGCGGCGTTCGAGTTCG 65428 32 100.0 33 ................................ ATCCGCGGGGCGTTCCGCCGCGGGGGTGAGCAG 65493 32 100.0 34 ................................ ACCGAGCCCGGCGGCGGCGACCTGCCCGGCATCC 65559 32 100.0 35 ................................ CACCGCGTGAACACGCCCAGCCGCGGCCCCTGGGG 65626 32 100.0 33 ................................ CGTCTGGACCGCCGAACTCGACCGGCGCCTCGG 65691 32 100.0 35 ................................ CAGCTGGGGGGCGAGCACCTCGCCGACGGTCTGAT 65758 32 100.0 35 ................................ TCGGCCACCGACCGCAGAGGCCGCCCCAGCAGCTC 65825 32 100.0 33 ................................ ATCGCCGACGACATGGCCGGCGCCCACGCCCTG 65890 32 100.0 35 ................................ GCCCGCCCGGGCGAGACGCCGACGTACCTGCCCAC 65957 32 100.0 33 ................................ ATCCGCGGAGCGTTCCGCCGCGGGGGTGAGCAG 66022 32 100.0 34 ................................ GCCTGGGGCGACACTTGGTGGCGGCCGCTGGGGC 66088 32 100.0 36 ................................ AACGAGATGGAGTTCGCGCAGCTCAAGCTGATGAGC 66156 32 100.0 34 ................................ ACCACGACGGACGCGGCGGCGACGATCCCCGAGG 66222 32 100.0 33 ................................ CCGTCGCGGGTGGTCGACGGGATCACGATGTTC 66287 32 96.9 34 T............................... TCGGTGAACGCCGAGACGCGGACGATCCACGGGG 66353 32 100.0 34 ................................ TCCTCACATCGACCGCGGGTCGGTCGCACCCCCC 66419 32 100.0 33 ................................ TCGGCGTCTCGGGTCCCTAGACCGCCGCTGGTG 66484 32 100.0 33 ................................ CGCTCCAGCCCCTTCTTCTCCTCACATCGACCG 66549 32 100.0 33 ................................ GACGCCGGCCGGGTCGGCACTCGGCGCCGCCGC 66614 32 100.0 33 ................................ GGGTACGTAGTCAAACGACGCTTCCCGGAGTTG 66679 32 100.0 34 ................................ ACGAAGGCGCTCGCGGCGAGCGGCGTGGACCGCG 66745 32 100.0 34 ................................ ATCGACTCGCGCAAGGACTTCGACGCGATCCGAG 66811 32 100.0 34 ................................ AGTCTGAGCCGGCCGATGGTGCCTGGTACTGAGG 66877 32 100.0 35 ................................ GCGACCCTCACCTACGACCCGGTTTCTTGGCTGCC 66944 32 96.9 34 ......................A......... GATCTCCGAGAGAAACGCCTCGACCGCCTCGAAC 67010 32 100.0 34 ................................ AACTGTTTCGAGGTCGAGGCGGACGCCGGCTTCC 67076 32 100.0 34 ................................ AGGAGCCCCCGATGCACAGCATCAAGATCGACCG 67142 32 100.0 34 ................................ ACTCACGGATGCAAGAGCGCTTCCCGTTGCTCAA 67208 32 100.0 33 ................................ ATAAGCAACGCGACAAAGAGAAGCGGGATTCCG 67273 32 100.0 34 ................................ GCAAAGCCTCGCGGGCAACGCTCCACGTAGACGT 67339 32 100.0 33 ................................ CGGTTATCGCGCCGCTGATCGACATGATCCCCG 67404 32 100.0 36 ................................ GCCAGCACCGGGGCCAGCACCGGCGGCGGCAGCAGC 67472 32 100.0 34 ................................ GCCGGGTCGAGGTCCTTCCGCGGCGGACCCTGCC 67538 32 100.0 33 ................................ AGCGAGCACAAGACGATCGGCGTCGACAAGGCC 67603 32 100.0 33 ................................ CTGCAGGCAGCGGGTCGCTTGCGGCGGCGGCGG 67668 32 100.0 33 ................................ GCTTCGATGCCGGAGGAGGTGCGGCCGGACGGA 67733 32 100.0 34 ................................ TTCTGGCCAGCCGTCAGCTCTCGCAGCGCTTCGT 67799 32 100.0 35 ................................ ACCCTGCACCATGGCAACCCGCTCATGGTGGACCA 67866 30 87.5 0 ....................--...G.....A | G [67893] ========== ====== ====== ====== ================================ ==================================== ================== 62 32 99.7 34 GTCGCCCGCTCCACGCGGGCGTGGATCGAAAC # Left flank : ACGCAGACCATGATGGTGCTCGTGACCTACGACGTGGCGACGAGCACGAGGGCCGGCGTCCGCCGCCTCCGCCGCGTCGCCAAGTGCTGCCTGAACCGCGGCCAGCGCGTGCAGTACTCGGTCTTCGAGTGCGAAGTCGACCCCTCCGAGTGGGTGGAGCTGAAGGATCGGTTGGAGAAGATCATCGACCCGAAAGTCGACAGCCTCCGCTACTACTTTCTCGGCGCCAACTGGCAGCGCCGCGTCGAGCACGTCGGCGCCAAGGCCGCCGTCGACCTCAACGGCCCCCTCATCGTCTGATTCCGAGGCCCGCCCCCTCCCTCCGCGAACCCGCAGCGCGCACCCGCACCCGGGTGGGTTCGCGAAGCCCCCTGAGCCGCTCTCTGACAGCCAAAGAGTCCCCTCGCCCCCGCCGCCGGCTCGACTCCGGCCGCGCGGGCACCGAGGTTCGCGGAAACGCGTCCTCAAACTCCGCCTGAGCCACCGCTTAGGATGGAGCC # Right flank : AGGTGACAGCCACCGATTTCGCCGATTTCGGCCTCGATCTCGGCCGCGCCCGAAGCCGACCCTGGGGTCGGCACTGGTTTGGGGGGCGGCCTCGGGCTTGAGGTCCGCATCTGAAGGCGTGAGGTCGCCTGGTCAGCTTGCGTGAGGCCGGCACCACGTGAGGCAGGATTGGACTGGGGAGCGGAGGGTGTCGACGCCTTCGCCGCCGCCTACTCCCGGCGCAGCTCGACGTCGTCGATGCGGACGTCGCCGCCGCCGCTCCAGAAGTCCAGGCGGGCGGAGGTCACGCCGGGGCCGGTGGTGAAGGTCAAGCTCTTCTGGTTGTAGCGGGTGCCGCTGTTGGAGAGCTGCTCGACGCCGCCCCAGCCGGTGGCCTTCATCACGGCGTTGCCGCGGATCCAGGCGGTCATGCGGTAGGTCGTGCCCGGGACGAGCCCGTTGACGACCGTCCAGATGCCGTTGGTGCTGCTGTTGCCCAGGCGGGCGGCACGCCTGCCGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCGCTCCACGCGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.20,-8.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //