Array 1 15315-17784 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPY010000008.1 Arcanobacterium phocae strain APH105 NODE_8_length_102210_cov_69.728877, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 15315 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 15376 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 15437 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 15498 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 15559 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 15620 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 15681 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 15742 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 15803 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 15863 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 15924 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 15985 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 16046 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 16107 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 16168 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 16229 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 16290 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 16351 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 16412 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 16473 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 16534 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 16595 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 16656 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 16717 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 16778 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 16839 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 16900 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 16961 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 17022 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 17083 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 17144 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 17207 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 17268 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 17329 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 17390 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 17451 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 17512 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 17573 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 17634 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 17695 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 17756 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 41 29 99.5 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //