Array 1 49-1478 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPI010000013.1 Arcanobacterium phocae strain 22984 NODE_13_length_36694_cov_56.194172, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 49 29 100.0 32 ............................. ATATTCTCGGTATTGCTACTGCGTTGTCGTCT 110 29 100.0 32 ............................. AATGACTATGCAGGTGCTTATTGCCAATCGAT 171 29 100.0 32 ............................. GATGGCGCGCACCGAGTAGGTTGATTTCAGTT 232 29 100.0 30 ............................. ACCGGGTCTTGCTTCCCGAACCGTTACGAA 291 29 93.1 32 T.G.......................... AGCACGACAATTACTGGACCGTCTCCGGAAAA 352 29 100.0 32 ............................. AATACGCCAAGACTGAAAATCTTAACGACGTC 413 29 100.0 32 ............................. TTTGAACCGAGTGCGTTTCGGCGTGCGTCACC 474 29 100.0 32 ............................. AAACGTGTGTGGGGGAGATCATGATGATATCG 535 29 100.0 32 ............................. TCGTCCGTGGAAGCCGGGTAAGAATATGACCC 596 29 100.0 32 ............................. AGGAATGTGAGTGCTAGGGTTGCTTTGATTTC 657 29 100.0 32 ............................. AGCCTAGAAAGAAAACCGCCGCATGAGCAGTT 718 29 100.0 32 ............................. AAAAACCCGCCACACCCACAAACTCAGGAAGC 779 29 100.0 32 ............................. GGTTGTAATGACCGCACCGGCATTAAATCCCG 840 29 100.0 32 ............................. TTTTAGTTCTTCTTCGCTGGCGGTAGGGAACT 901 29 100.0 32 ............................. GTAGCCATTTCACGAATCAACGCGAGATTGTC 962 29 100.0 32 ............................. TAGTGCCTTGTTATAGTCTTGATTTTACTGGT 1023 29 100.0 32 ............................. CTACGCCAATCGGTTTGCGTAGGCTTATCGAA 1084 29 96.6 32 C............................ AGCCTTTTACTTAACTTTGGAAAACACGGTGT 1145 29 100.0 32 ............................. AGGGTAGAGACTACCGCGCGGGCGAGCTCAGT 1206 29 100.0 32 ............................. GCAAGCCATTTTGGCGTGATGAAGAAATCTAT 1267 29 100.0 32 ............................. GCGGTAATGCAGATATCGGGAAATACACGCTA 1328 29 100.0 32 ............................. CCACGGATGTTGTCTCATACGCCCATGCGGTC 1389 29 100.0 32 ............................. ACAGAAATGGGTGGATTCAATTCCCAGCTTCC 1450 29 96.6 0 T............................ | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.4 32 GGAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : CGTGTGCGGGGAAGAGAATGACTATGCAGGTGCTTATTGCCAATCGATG # Right flank : GACTAACGAAACCCTTTATTTTCAACGATTTCGAATTTTGGATTTTCCACGTCCGGGACGCATAGCTATAACGGTCAGGCCGTCCAGGTCCAATACTTTTCGTGAATTTTTTCCTGCAGTGAGCATCGAGAATCCTTGTTCTTGTCGCGGGTCGTTATAAATCATAGTAGAAGTTCCTTCGTCGAGCGTAGTGCTCACACGTTCCCACAAGCGTTCACGAACGTTTCGTGAAATATTTCCAACGTAAACACCACTTTCAACCTCAGTGAGGAATCGGGTCACGTACCCATGAAGATGCTCGGGAACTGCGGATATTGTTAAGACTGCAAACATCATTCATCGTCTTTTCCATATTGGACATGCCCAGAAACTTCACCGTGATCGTTGATCAAACGGTCATCATCACGGTTTGGCAGGTGCGGCTCTAGAATTTCCATGAGCGTTCCAAGCATATCTTCCAATATATGCTTGTTGTGAATTTGCCTCCGTAAATCGCGTCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.64 Confidence: LOW] # Array family : NA //