Array 1 3648770-3649697 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI535482.1 Enterobacter hormaechei strain UCICRE 11 addUq-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3648770 28 100.0 32 ............................ GCAAATGTAGTGGTAACGAACCCGCGCCCAAT 3648830 28 100.0 32 ............................ CGTATCGGCAAAACCTACGGAGCCGCACATGA 3648890 28 100.0 32 ............................ GATCCCCTCTGGTACGGTGGCGCGGGGTAAGT 3648950 28 100.0 32 ............................ TTGTAGCCCATCCTACGCTTCACCTGGTCGCT 3649010 28 100.0 32 ............................ TCAGCCAGCGCGAAGCCAACCGCAGATGATAT 3649070 28 100.0 33 ............................ TGCTGCCGCATCACAGACAACCTCAGGTAAGAA 3649131 28 100.0 32 ............................ GGCTCGGATATCGATTTTTCTGGCATCTACAA 3649191 28 100.0 31 ............................ CATTCAGACTGTCCGCTAATTTTCGCCTTTT 3649250 28 100.0 32 ............................ TGCAAAAGCTCCAGAACGCCATGCGAGAACTG 3649310 28 100.0 32 ............................ ACTGGATTCATCGTTCAACTGCTGGCGTGGGA 3649370 28 100.0 32 ............................ GTTTTAACTTTTCCTGGCGCTTTGTGAGCTGG 3649430 28 96.4 32 ............G............... AGTCTCGTTCCATAAATCATCCACTCTTTTAA 3649490 28 92.9 32 ............G.............T. GTTGGCCACGGCAACCTGACCGAAACCGGCAT 3649550 28 100.0 32 ............................ ACGAACGCTTAACATGTTCCATGCCCGCTGGC 3649610 28 100.0 32 ............................ ATTTGTCTTGCTGGATGTTAGTTACTGAGCAC 3649670 28 75.0 0 ......C...........T..A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 16 28 97.8 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTCAAAACCGAACTCGCAGAATCAATGAGTGATTTCCGGGTGGTTGAATTTGACGACGAGACGGAACGGCTGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAGTTCATATCATTAATTAAGTTTAGTCTCGTGCGTCGGGGAAGGGACTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGTAGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCCAAACATTCACTCCAACTATTTTAAAATCCACAATCATCACCACAATCCTCGTTGTATTTTTAATAAACTCAATACTCATTCATCCGACAACCATATTCCCTCACATATATTATTCATAAAAATAATACATTAAATATGTCAGAGATTTTTTATCTCGACACTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCCGCATTCAACACATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCGGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCGATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3653712-3654220 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI535482.1 Enterobacter hormaechei strain UCICRE 11 addUq-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3653712 28 100.0 33 ............................ ATATTTGGCATTCATTTCTCTGTCCGGCTGGAT 3653773 28 100.0 32 ............................ ATAATGAATGGGATAGTCTGTTGACCTGTAGG 3653833 28 100.0 32 ............................ TTCATGGGATGCTGAAGTCCGTAGTCGTCTTG 3653893 28 100.0 32 ............................ AATTATAACCGACCTTAACGCAACGCTGCGCA 3653953 28 100.0 32 ............................ ATGCTGAGTGACGCATCCTTGCAGCTGCGAAT 3654013 28 100.0 32 ............................ AACAGCGACAGCGACTATGCCGTTAGGGCAAA 3654073 28 100.0 32 ............................ ATCGGCTTTGCTCATAAGCTTGTTGATGAAGC 3654133 28 100.0 32 ............................ GGTTACCGGGCGGCCGCGCGTCTGAATCATCC 3654193 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGATCCTAATTTTTGACCAAAATGTAATGCATTGATTTTTCGGTAAAATATCCTGTAGCGCAAAAAAAGGGTTTGAGCAGAGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGATATTATTTCA # Right flank : ATCATCGAGTGTAAGGCTGTGTGATTTTATTGTGTGCACCACCGCACAACCAACACTAAAGCCGAAACAAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //