Array 1 347406-352420 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044222.1 Nitrincola iocasae strain KXZD1103 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================================================================================================================================================== ================== 347406 29 100.0 32 ............................. GCCTGCGCACGGCTGCATACGTTGACCCTGTC 347467 29 100.0 32 ............................. GGAATGTCATGACGTAGTGTTTCATTACTTCG 347528 29 100.0 32 ............................. ACCTGATAAACACAGTTCTCGTTCTTCATTAC 347589 29 100.0 32 ............................. TAATTCAGGCTATGATGGATGACGAGATGAAC 347650 29 100.0 32 ............................. GGCGGACGGGTGCTGATGTAGCCGTCCAGGAT 347711 29 100.0 32 ............................. AAAATGAAATTATTAAATAGAATTGAACAGAT 347772 29 100.0 32 ............................. ATTTTCAAAGACTTAGCTTAGATTGCTAGTGT 347833 29 100.0 32 ............................. AAAATTATAAAAAACTTTCCTCGCTTGCTGGT 347894 29 100.0 32 ............................. ATTAAAACATAAAAAACAGCAAGGGATTATTA 347955 29 100.0 32 ............................. CAATCGATACTGATAAATTGAATCAGGTGTTA 348016 29 100.0 32 ............................. CAGACAAGCCTGCGGCGGAAGCAGACAAGCCT 348077 29 96.6 32 ............................A AAATCCTCCTGAATATCAGCAAGGTTAATTTC 348138 29 100.0 32 ............................. ATAACAGATGATTTAGATACATTAAAACTTGT 348199 29 100.0 32 ............................. GCTGAGCGTACCGCTATACGCGATATATACAT 348260 29 100.0 32 ............................. TTTCTTACCAATGCAACGACATTACAGGAAAA 348321 29 100.0 32 ............................. ACTTTCAACCAGCAACAAAGTTTTATTGTGAG 348382 29 100.0 32 ............................. CTGGCTATATTGTGCTATCGGACGATATTAAA 348443 29 100.0 32 ............................. ACTGAAAAGCGGAAACTATTGGCTATGCTGCA 348504 29 100.0 32 ............................. GCTTGTCTAGTAGTGGATACACTGTTACGGGT 348565 29 100.0 32 ............................. TATAAAATACATGCATACAGGCGGCGGCATGT 348626 29 100.0 32 ............................. CCCCGCTGGGCGCAAATCTTGTCGGTGCGAAA 348687 29 100.0 32 ............................. TGCGGCATTGACGCCGCAGGAGAGCCAGTCTA 348748 29 100.0 32 ............................. GTTGGCACGGCCCAGCTTGCGACCATTCATTT 348809 29 100.0 32 ............................. TGACCCTGTTCTCGGTGGTGGCGGTGGGGGTG 348870 29 96.6 32 ............................T CGTTCAGGCAGGCGTCCATAGTGTCGCGGTGG 348931 29 100.0 32 ............................. GCTTCCAGATCCGGAGCGTCGCTGGCGTATTC 348992 29 100.0 32 ............................. CCTTGGCCGCGTTTGTATTCACAGTGACTGCA 349053 29 100.0 32 ............................. CCTCTTCGACGCGGCTTAATCCCTTAACTGTA 349114 29 100.0 32 ............................. CCTCTTCCTTGCGCTGCTTCTGTACGAAAAAA 349175 29 100.0 32 ............................. GTCAAACCGGACAAATTTTAATGCAATCCCAT 349236 29 100.0 32 ............................. CATCATCAGCGAACCTATAAACACTCTAGTCA 349297 29 100.0 32 ............................. CATGCAGCCAACGCGACCCATGCCCAGCTCAT 349358 29 100.0 32 ............................. CCGGAACGGTCGCACGTTTTAATGCCGTTGAT 349419 29 100.0 32 ............................. CACGTCGCAGCAATGCCAGACGTTCATTGGGG 349480 29 100.0 32 ............................. TTTCGCTCGCGGCGAAAATCCGTTTGGGTTTG 349541 29 100.0 32 ............................. TTAATGCCACGTATACTACCGCCGCCATTGAT 349602 29 100.0 32 ............................. CATGTGATTGATTTTCTGTCCGAACGTGTTCT 349663 29 100.0 32 ............................. GTTGGCCACCACGTTGGACCAGCCGTCTGAAC 349724 29 100.0 32 ............................. TTTTAAATTGGCGCGAATGCCTAGGCGCTCAG 349785 29 100.0 32 ............................. TTAGTCACTCCACGTGGCCCTGTGTAGCGAAT 349846 29 100.0 32 ............................. CTTTTTATCATATCGCCAAACTGTCTGATCAC 349907 29 100.0 32 ............................. ATGATTCAGGAGTTTCTAAAAGAGGGTAGGGA 349968 29 100.0 32 ............................. ATGATTTTGACCAACTTGATTTGCGTTTGCGC 350029 29 100.0 32 ............................. ATGACGCTGAACCATTCTGGCAATTATTTGAA 350090 29 100.0 32 ............................. ATGTCATCTAGAAAAAAATAATTGTCACAATC 350151 29 100.0 32 ............................. TGCAAACATTATTAAGCGACAGTCGCCCTTCA 350212 29 100.0 32 ............................. GTTTCGGCCAGGGTGCCAACCTGAAAGATGCC 350273 29 100.0 32 ............................. TGCAAACATTATTAAGCGACAGTCGCCCTTCA 350334 29 100.0 32 ............................. GCGCAGACAAAATGCCTCGTCAAACTCTTCGC 350395 29 100.0 32 ............................. TTAAAATCGAATGTCCGTGATATATTCGTTGA 350456 29 100.0 32 ............................. CAATCGGCATGCCTGCACGCGACGCCATTCGT 350517 29 100.0 32 ............................. TGGTTGCAATAATCTGTTACTAACGTTACCGA 350578 29 100.0 32 ............................. TCATCGTTAAACATAGACGACGTAAAGCGCGG 350639 29 100.0 32 ............................. TGAAAACAGGTCAAAATCTTTATCAGCAAGCA 350700 29 100.0 32 ............................. CACCGGGTAATCATAACCAATGTTATTAAACC 350761 29 100.0 32 ............................. CCCATAGCGCAACATGCGCTCTTATAAAACTA 350822 29 100.0 32 ............................. TCCAGCGACTCTACCCAGTCACGCTCAAAGTC 350883 29 100.0 32 ............................. GGCATATCCTTCACCAGCTTGACCAGGTTTGT 350944 29 100.0 32 ............................. ATCAGCAGCGAAGATTAGAGGGTTTTGATACA 351005 29 100.0 32 ............................. GCAGGATCGCCATTTCGGCTAAAGACTACAAA 351066 29 100.0 32 ............................. CTTATCACAATGGAAGATCATGCCAAGGCAAT 351127 29 100.0 32 ............................. CCACCTTTTTGCGCGCCAGGTATTTTGATTTA 351188 29 100.0 32 ............................. ATGATTAATGAAATGGTCTGGCTTAAACATCC 351249 29 100.0 32 ............................. CTGGTGCTGATGGGTCAGTAGGACTAATGAGT 351310 29 100.0 32 ............................. TTCTGGGGTGAGGAAGGCCGGATCATAATTGA 351371 29 100.0 32 ............................. GATAGGGCTGGAAGAATATTCCCGAAGCGTTC 351432 29 100.0 32 ............................. TTGGCCTGAACGCTCATTTGATCTCTTGATAC 351493 29 100.0 32 ............................. CAACCCCCAATTACTACATGGCTGAAACCGAT 351554 29 100.0 32 ............................. CTCCCCATGGGTGTATGCATCATCACGCTCAG 351615 29 100.0 32 ............................. GGATATAGACGCAATCAGTAGCAACGCCTTCA 351676 29 100.0 32 ............................. CAGAGACTCCAAAACTACGGCGTTTTTTAGAG 351737 29 100.0 32 ............................. GCACTGATGGCGGCTGAGAGTCAGTTCGGCGT 351798 29 100.0 32 ............................. TGAAATCGTGGGTGGTGCTGGTGGTAGTACGT 351859 29 100.0 32 ............................. CACTGAGCCTCTTCTTCAGTTGCGTTGATGTA 351920 29 96.6 32 A............................ TTGTCGCCAATGCCTTCGATATGGCTCAAACC 351981 29 100.0 32 ............................. ATGCTTGAGGAGCGTGCCAGATCACTGGCGCG 352042 29 100.0 32 ............................. ATTGAAACGTAGCTGCTGGGCCTTCCATCCAA 352103 29 100.0 32 ............................. CGAACCTGGAACCAGCGCTGCTGTCCGAAAAT 352164 29 100.0 198 ............................. CAAAGGTGTAGCATTGCCAAATCGTGAGGCATGCATGGAGCAGCGCCGGGAAGGTGTATTGCTGTACAGGCGTGAAGACGTTGAATGAGGGTGGATCGCCCCGCCGTTCCACCCATGCGCAGGATCTTAGGTCGTACCTCGGAGTACTAGGCCTACAGCACAATTAGTATAGGAAGCAATCATGACCGGATCAACTCA 352391 29 93.1 0 ......T.................T.... | G [352414] ========== ====== ====== ====== ============================= ====================================================================================================================================================================================================== ================== 80 29 99.8 34 GTGTTCCCCGCACCTGCGGGGATGAACCG # Left flank : AGATGTACTGGCTGCTGGTGAAATTGTTCCTCCTAAGCCACCGGAGGATGCCCAACCACCAGCTATTCCTGAGCCTGAGTCATTAGGCGACACCGGTCATAGGAGTAAATAATGGCCATGCTCACCGTTGTGACAGAAAGCGTACCTCCAAGGCTTCGGGGTCGTTTGGCTGTATGGTTACTGGAAGTCAGAGCTGGCGTATATGTAGGTGATGTATCCAGGAAAATTCGTGAGATGATCTGGTTTCAGGTTACCGAGTTAGCAGAAGATGGAAACGCGGTAATGATCTGGGCAACCAACACAGAATCAGGTTTTGATTTTCAGACATATGGTGAAAACCGGCGAATACCAGTGGACTACGACGGCTTACGACTAGTCTCTTTTTTACCACCTAAATAAGAAGGTTGACCTGCTCTTTAACAATCAATAAAAATAGGCAAAAATATGGTAGATTTCTAAAGCAGCAAAAATTGTTTTAGAATCAATTATCTCCATTTGGA # Right flank : GTTTTAAAGAGCACGACATTTCGTAGCGCTTGTGTGCCAGAGTTGGAATCATAGTTTGAGTTCACGAACCTTTGAAATACTCTCTCCATCAAAGACGAACTCAAAGTGCTGTGTTTGAACGGCAGACTCGACAGGCGAAGGCGACATTAGTGCCCAGCAAGTCGCCCCTGCATGTCTGACTGAGCGATATTGAAGTCCTGCCTCTCCTGATTTTTTAACCTTAGCTCTAAAAATACGGGAGGTTGTGTAATCATTGGGTACATGGATAGCATTAATAGAAACAGCGTCGATAAGCTCTGCTGAGAACTTAACTTTGAGGCATCGCATATCATCCACAGTGTCGTAATGAAGTCCTTCTACATTCCTCAAATACCGGTGATCGCAAGATCGATGGCTTCAATAACCTGCTCTCTGAAATGCGCGAGAGTGCCTATTGGATTCTTCAGGTGTTTTTGTGACACAGAGGCTACTTGCGGGACAAGCAGCAGGAGTTCCTGATC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1256726-1261674 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP044222.1 Nitrincola iocasae strain KXZD1103 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1256726 28 100.0 32 ............................ GATATGTGTCGAGCTGAGAAAATTGATTATAT 1256786 28 100.0 32 ............................ ACCAGGTGGTAATACGGCATGCCGTCAGTGCC 1256846 28 100.0 32 ............................ TGTCTCTGTTGTTCCTGGATTATTGCTTGCTG 1256906 28 100.0 32 ............................ TATAAATAAAAAGGGGCCGAAGCCCCCTCTTA 1256966 28 100.0 32 ............................ GCTAACAGTCACAATAGGGTAGCCTTTGTATC 1257026 28 100.0 32 ............................ TTCTTGGGATTGATTGGAATCAGTTCAATCGG 1257086 28 100.0 32 ............................ TCGGTGCGCAGAAACCCAACTAGCTTCGCGGC 1257146 28 100.0 32 ............................ TAAACACTGACGAGCTAAGGATTGAGTACCCA 1257206 28 100.0 32 ............................ CTATTAAAAAACGCGCACGCGCGCGCGAAAAG 1257266 28 100.0 32 ............................ GCACCTGGCAGGGCAGACGACATGCCTGAAGC 1257326 28 100.0 32 ............................ TGATTGGCGACGTGTTGCCTATATGCAGACTG 1257386 28 100.0 32 ............................ TACATCGAACAACATCCTGTTCAAATAGAATG 1257446 28 100.0 32 ............................ AGATGGTTCTACCAGGTTGTCCTGCCAGATGG 1257506 28 100.0 32 ............................ TTGCTCTGGCCTTGCAGGTAATGCAGGTCACG 1257566 28 100.0 32 ............................ CTTACAGGGCTCTGTCGTTTACATCGCTGGTG 1257626 28 100.0 32 ............................ TGAATATCAGAAATCATATTAGTTAGGTTTTG 1257686 28 100.0 32 ............................ AGGATCGTAGTTAAGCGGATCAGCATCATCAA 1257746 28 100.0 32 ............................ AACATCGGCATCCAGACAATGCAGGCTGACAT 1257806 28 100.0 32 ............................ TGCACGCTGTATGCCTATCCAGTTAACATGAT 1257866 28 100.0 32 ............................ TGCTGAAGAAACCATCAAAACCATTACTGATG 1257926 28 100.0 32 ............................ TCAATATAATAAATAGAGCTAATAACAGAGCT 1257986 28 100.0 32 ............................ TGCCCTTTTGGCAGATCAATTCCCGTCTTTAC 1258046 28 100.0 32 ............................ ACACCGTACCAAACATACAGACCTGACCATTA 1258106 28 100.0 32 ............................ CTTTGAAAAATGGACCGAGAACAGCCTTGTTT 1258166 28 100.0 32 ............................ AATTTGTGCAAGTCAGGACGTTTGACATAAGG 1258226 28 100.0 32 ............................ TGGTGAATGTTGTGCTGCTGTCAAAACAGTTA 1258286 28 100.0 32 ............................ AGTTGTTATTTGCAAAAGCCGATTTATCAAAA 1258346 28 100.0 32 ............................ TACATCGTCCAGTACCTGAGCATTGTTTTCAA 1258406 28 100.0 32 ............................ TGCTGATGGGTGAGTTCAACAGCCGCCCTGCT 1258466 28 100.0 32 ............................ TTGATCACGCGGCCTGTGGTTTTGCAGCGCTT 1258526 28 100.0 32 ............................ TGCAGGCGCAAGACGACGATGGCGGGTGCGTT 1258586 28 100.0 32 ............................ GTGCCTTAAAGCAGGGCGGCCAATAGTTACAA 1258646 28 100.0 32 ............................ CTGACTTAACGCCTGATGATGTTGAATATAAA 1258706 28 100.0 32 ............................ TGATCACCCCACTAGCTATGATTTAAAGTCTC 1258766 28 100.0 32 ............................ TACTCAATGTCTCCAGTTATAAGTTCTGGTCC 1258826 28 100.0 32 ............................ TCACTGAAGTTTGCACTTCCTTTTTTTATCAT 1258886 28 100.0 32 ............................ TTTAAATAATGGACCGAGAACAGCCTTGTTTT 1258946 28 100.0 32 ............................ GATTACAACGCATGTAATTGATAAATCGACTA 1259006 28 100.0 32 ............................ GGCAACAGTGCCATTTTCGGGGCATGATAAAG 1259066 28 100.0 32 ............................ GGAGTAGCTGGGCGCTGGAATCTGAACAGACA 1259126 28 100.0 32 ............................ ATCACAGAGTGCCCTCCATGTGCTTTTGTTGA 1259186 28 100.0 32 ............................ CATTAGTTAGTTTCGCGTTTGCATCAACATCG 1259246 28 100.0 32 ............................ TGGTCATAATCCTGTTGGCTAGTACGTATCCC 1259306 28 100.0 32 ............................ GAGGTAATGAGATACCGCAGCATAAGTATTGA 1259366 28 100.0 32 ............................ ATGCGCGCCATCTTGGCCCCCGGGTACTGTTT 1259426 28 100.0 32 ............................ TGACACGGGAGCTGCAGGCACTAAAAGAAGGT 1259486 28 100.0 32 ............................ TGAAAATAATGATTCAAAAGCTGGATTGGCTA 1259546 28 100.0 32 ............................ ACCAGGGGGAAAAGTGGAAAATGAAGTTGAAA 1259606 28 100.0 32 ............................ AATTGAAATGCTTAGTAGCATTAAGCTTATCA 1259666 28 100.0 32 ............................ TGGCAGATATTCAAGAGGATTTCGATTCCGGT 1259726 28 100.0 32 ............................ TCAACGGCAGCAGTAACAGCACCTACTATCAA 1259786 28 100.0 32 ............................ TCGCTCAGTGCTGTCCAGATCCCGGACCTCTA 1259846 28 100.0 32 ............................ TTAGTGTTGTAACCCCGCCGCTTGGCTAGGAT 1259906 28 100.0 32 ............................ AATCACTTACCCCATAAACATTCACACCGCGG 1259966 28 100.0 32 ............................ TGCATGTAGTCCCGGTCTTGTAGGCCCATTCT 1260026 28 100.0 32 ............................ AGCAATGATTGATGCAGTGATCAAAAGAACAT 1260086 28 100.0 32 ............................ TAATTGCGGGATATACCTGATCAGCAAAAGCA 1260146 28 100.0 32 ............................ ATCATGCCCTGTGCTTTTAGTTTCTCGATACC 1260206 28 100.0 32 ............................ AATCAGATCTTTCTCAAGTGTGCGCATTCTCA 1260266 28 100.0 32 ............................ AATACCGGGCGGTGATCGCTACCTGACACCAT 1260326 28 100.0 32 ............................ TGACACGGGAGCTGCAGGCACTAAAAGAAGGT 1260386 28 100.0 32 ............................ TGTATCCAGACGGTTACCAGCGCCAGGCGATC 1260446 28 96.4 32 .....................A...... CTCAAGCGCTGATAGCAGCGCCGAAGGCTCAG 1260506 28 100.0 32 ............................ TATCAGGGTTACGTAGCTTTGATGATTAACGT 1260566 28 100.0 32 ............................ TACCTGAAAGCCGTATTCAATGAGCTGATCAA 1260626 28 100.0 32 ............................ AACACGCTAAATCACGAACTCGCCTACCTGAA 1260686 28 100.0 32 ............................ GATCCGGGCGTGATGTAACTCCAAACACGCTA 1260746 28 100.0 32 ............................ ATTACCTTTAATTGGGATGGTGCTTCTGTTGT 1260806 28 100.0 32 ............................ ACCCCGCGCCTGTTCAACCGCTTTTGAAAGCC 1260866 28 100.0 32 ............................ AATGCGGCAAGCCTCTCGCTCCAGCGACCACT 1260926 28 100.0 32 ............................ AAAACCATGATCACGCTGGTGCCTATTAGTAA 1260986 28 100.0 32 ............................ TGATACCAATCCTGTAAAGCTTGTTCCAATTC 1261046 28 100.0 32 ............................ AATCAGAACCGGCTACAGGTGTGTTTGTTTCT 1261106 28 100.0 32 ............................ AAGCTGTTAACACTGAACCGCCGAGGGTCCAT 1261166 28 100.0 32 ............................ TTCAACAGCAGGTCCGAACTCAGGTTCATCAG 1261226 28 100.0 32 ............................ GTAATTAATTACATCTGCACCAGGCTCCATGT 1261286 28 100.0 32 ............................ TCACTGGCGCCAGCCAGCGCACAAAACAAAAG 1261346 28 100.0 32 ............................ AAGCTGTTAACACTGAACCGCCGAGGGTCCAT 1261406 28 100.0 32 ............................ TGGCAGTGGCAAGGGCGTTGGTTTTGTTATCC 1261466 28 96.4 32 ......................C..... TGAACAGGGTGCCGGTCAGAAAATGAGCTTCC 1261526 28 71.4 32 .T....T...GTAT....A...C..... TACAAGGGACGAGCTACGACAACAGAATTCAA 1261586 28 71.4 32 .T....T...GTAT....A...A..... TGCATCCGGTACCATCGGCCCTGTGCCATATA 1261646 28 75.0 0 .T....T...G.AT....A...C..... | T [1261672] ========== ====== ====== ====== ============================ ================================ ================== 83 28 98.9 32 GCTCACCGCCACGCAGGCGGCTTAGAAA # Left flank : TGAAATCTATCCAACCCGTACCTTCGTCAACAACTGGTTATGCCAGTTTTGTACGCCATCATGCTAAAGGCCATGCACGGATTGAAAAAGATGAACGGGAAAAAGCAGAGTTGTGGGCCAGGAAGTCTGGAAAATCACTGGAGGAGTGCCTTGAAACCTTGGCTAAAACCAGACCGCAAGCTGACAACAAGCTGCCCTTTATCTGGATGGAAAGCCAGGAAACCAAAAAGCGTGATGCAGCTTTAGATGGAAAATTTCCATTATTTATCAGTATGATAGAGTATAAAGTGGACCGCACGGGAAAGTTGAACTGTTACGGCCTTAGCTATCCACAGTACCCTGTAGCGCTACCCCAGTTTTGAGAAAAATAACCAAAAAATTGCTCTTTAAAAAATAGGAATAAAAATCAATAAGTTGCAGCCTGGTGTTTTGAGAAAGGGTAAAACAGTCTTTTTCTCATAACCTCATGTTGTAACTTCTTTTTTTGCTGTTATTCTATT # Right flank : AAGTAGAATCTTCTAATCTGTTAATGGCCAACTAAACTGAGCTTCCCCCAATAAAACGGACGGTTTAATTAAGAGGCGTACTTAGCCTCGTATTCCACTGGACTGATATAGCCCAGATAAGAATGCCGTCTGCGCCTGTTATAGAAGACTTCAATGTATTCAAACAGGCTTTTCTTTGCTTCATCTCTCGACCGATAGTCCTCGTCGTAGACCAGTTCCGTTTTCAGCGTTCCGAAGAAGCTCTCTGCCACAGCGTTATCGAGACATTCCCCTTTCCGGCTCATGCTGCAAAGTAGTTTGTTTTCCTTTAGTAGCCGCTGGTAGCTGCCCGAGGCATAGGTGCTTCCCTGGTCCGAATGGACGATAACTGAGTCTACCTTACCTCGACGCCAGACAGCCATCGTCAGGGCATCCTGGACAAGCTGAGCGTTATTCTTGTCTCCCATTGCCCACCCCAGCACCTGGCGTGAATACAACTCAATCACCACGGCCAAATACAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCACCGCCACGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //