Array 1 1183847-1173442 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049055.1 Candidatus Kuenenia stuttgartiensis strain CSTR1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1183846 30 100.0 36 .............................. CGGAGAAGGCTTTCACAATAGAATATGTAAAAAATG 1183780 30 100.0 36 .............................. TGATCTCGCTGATAGATAGCCTGAACAGAGGTGGAA 1183714 30 100.0 36 .............................. TGATAATTTTATCTTTAATGAAATTAATTTAATTTT 1183648 30 100.0 37 .............................. GAAGACCGGATTGCGCTTGAAAACTTTGAAAAGTATA 1183581 30 100.0 36 .............................. TCATTAAAGTCAATCCATTCACACATTTCTAATTCC 1183515 30 100.0 36 .............................. AAGAAACAAAAGACCTTTGCAAAGTTTATTAAAATC 1183449 30 100.0 36 .............................. ATTGAACTCCATCTCCAACTTTTGCTCCACTATCTC 1183383 30 100.0 36 .............................. TCAGATACTTTTGATAGAATCTATAGATGGTAAGAA 1183317 30 100.0 36 .............................. GATGCAGATGGTTCGGTGGATAAAAAGGGAAGAATT 1183251 30 100.0 37 .............................. CTCATGGATGCACCAATTCCGAAAATAGCGATAGAAA 1183184 30 100.0 36 .............................. ACAAACAAGGCTTTTCATTAATCCCCCTGCTTGGCA 1183118 30 100.0 37 .............................. GAAGAACAGCGCGAGAAAGAGATCGACGTGACTGGGG 1183051 30 100.0 37 .............................. CTGTGTCAACAATATAATCGCCAGACGAAAGGGTTGC 1182984 30 100.0 36 .............................. AATATTTTAGGATAGGGGAATGGTTTGCGGATTGCG 1182918 30 100.0 37 .............................. CCCGTTTAAGCACAAAAAATACGGCATTGCTTTCTGT 1182851 30 100.0 37 .............................. TAAAATGATAAGTCAAAATCATGCCAACTGGCGTATC 1182784 30 100.0 36 .............................. ATTGCAAACCTTCGTTTTCATCAATCGCTGTATATT 1182718 30 100.0 35 .............................. TCAATGCCATAAGGCAAAGATACTCTTACATAAAT 1182653 30 100.0 36 .............................. TCAGGTTAAATTCTATTCCTACATCTGATGATAACA 1182587 30 100.0 36 .............................. TTACACAAAAGAAATAAAGCAGCTTGATCCTAAATA 1182521 30 100.0 36 .............................. ATTGTCAGAAAATATTTGCTCAGCCTAATTTTAATT 1182455 30 100.0 37 .............................. ACAGCCGATTATTCTACCCATTGAACTACAAGGGATT 1182388 30 100.0 38 .............................. TTTGTTTCCTGGTATCAACATAAAAAGCGTATGATAAC 1182320 30 100.0 36 .............................. TGACTAAGGTACTAAGGTACTAACCCTGACTGGTAC 1182254 30 100.0 36 .............................. TATCCATTTAAAAGTGTCCCAATGTGACCAAGTGCA 1182188 30 100.0 36 .............................. TAATCGGAAAATAATTACAACTACTGACGGGACACA 1182122 30 100.0 36 .............................. CCGGTAAAGGCTGAGAATTAAGGCAAAAAGAACATT 1182056 30 100.0 37 .............................. TATCCATTTAAAAGTGTCCCAATGTGACCAAGTGCAA 1181989 30 100.0 36 .............................. TTGTTCTGATTGTAACGAAATTGAAAAAATTAAAAA 1181923 30 100.0 37 .............................. TTGAAGCACTTTTCCTTAGTGCTTCTTGTAAATCTTT 1181856 30 100.0 37 .............................. CTTTCTTTACAATTCTGACATTGATATTTGTCTCTCC 1181789 30 100.0 37 .............................. CAAAAAGAGTCGCCATCATATTCAATTGTTTCGTCTA 1181722 30 100.0 36 .............................. TAATGATTTAAAGGGAATGAGCAAAATTGAGTTGAA 1181656 30 100.0 36 .............................. ACCCCCCACAAATCATCAGGAGGGTCTGCTATTTCC 1181590 30 100.0 37 .............................. TTCCGCTTATTTGCTGGAAAACACAGTAAGGGTATGC 1181523 30 100.0 37 .............................. TTGGCTAGAATTACCGATATTGCGAAACAAAAAAAAG 1181456 30 100.0 37 .............................. TCGCATAACAAAACTATAGGTCTATCTTTCTGTGGAG 1181389 30 100.0 39 .............................. ATTAACTTTATACATATTATCATATATTATGATATTTGT 1181320 30 100.0 36 .............................. TAAGGAATCCTTTTATTACAGCAATTACTTAAAATT 1181254 30 100.0 37 .............................. TGTCATAAGGCACAAAGGCACAAAGGCACGATTGCGC 1181187 30 100.0 37 .............................. CAAAAAGAGTCGCCATCATATTCAATTGTTTCGTCTA 1181120 30 100.0 36 .............................. CGCCAAAACCCGTCAACCCTATTGAAATAAGATTTG 1181054 30 100.0 36 .............................. GTCTCCGGCTTTGGATATCCCGGCTTGCTACCGTCC 1180988 30 100.0 36 .............................. CGCACTGGGCTGAAATAGATGATTTGCTGGGCTATG 1180922 30 100.0 35 .............................. TTTTTACTGTAGTGACTGCAATGAAATTGAAAGGT 1180857 30 100.0 35 .............................. CAAAAAGAGTCGCCATCATATTCAATTGTTTCGTC 1180792 30 100.0 36 .............................. CAAATATTAAGAAAATTTAGAGATGAGGTTTTGGCA 1180726 30 100.0 37 .............................. AAAGGATTTGATAACGTCGATTATCATCCATGATTTG 1180659 30 100.0 36 .............................. TCAAATGTCTCACTTGTTATTGTTTTCATTGCTTTT 1180593 30 100.0 36 .............................. TCGAAAATGTCTTTAATATGCTTTCCAATCATATAC 1180527 30 100.0 36 .............................. CAACTATAGAAATCCGGAGGAAATCAAAAATATTTG 1180461 30 100.0 37 .............................. CTTTTTAGACACAGCAGCTTATTCAGGCTCAATCGCG 1180394 30 100.0 36 .............................. AAAGAATTTCTTAATAATGTACGTAGTTATCAATCC 1180328 30 100.0 37 .............................. AAATTTCGTAAGAATTTACGGCGGTTTTTACCGCTTC 1180261 30 100.0 36 .............................. TCGTTCCTGCAACTATATCCTCAGCCGCAACGCTGT 1180195 30 100.0 36 .............................. TCAGTTGGAATGCCGGTTATTCCGCTCCAATCCACA 1180129 30 100.0 35 .............................. CTTCACTTTTCATATACTAAAAACCCTATCAATTC 1180064 30 100.0 37 .............................. ACAGGAGTTAAATAATGGCATACGCTGATTTTGCGTT 1179997 30 100.0 35 .............................. ATGTTAGATGGGAAGAAAAAATGGTTCGAATTAGA 1179932 30 100.0 36 .............................. TCTGGAATGAAAAAGGAAGATGTGGACAAGATGACA 1179866 30 100.0 37 .............................. GCGGTATGGTTTTCGTATTTCAAGTTTTTACTCCAAT 1179799 30 100.0 37 .............................. ACTATTCTGTATTCGCTCTTCCACTTTTCCCTAAAAT 1179732 30 100.0 36 .............................. GAGAAAAAAGTTTCTTGATTAATTCCATGTGGCAAA 1179666 30 100.0 38 .............................. AATTTGAGGGGTTATAAAATAATAAGGGGAAATTAATA 1179598 30 100.0 38 .............................. TTTTGATAAAAAACACAATCATTAACTCCCCTTCTATC 1179530 30 100.0 38 .............................. TAGACATTATGGTTGTATACATTGCCTTTTCCCTCAAA 1179462 30 100.0 38 .............................. CATTCCAAAAATCTAATTGAATTCCTTGTTGATATTCT 1179394 30 100.0 37 .............................. TTATTTTATCTTCAGTGTCGGTGTAATGATTTTCATC 1179327 30 100.0 36 .............................. AATACCATTTCCTTAACTTTCCGAATAGTTTCGTAC 1179261 30 100.0 37 .............................. ATACTTATTTGTAACGATTGTTAAATTGTAATCGTTG 1179194 30 100.0 36 .............................. CAATTTCCCTTATTACAAATAAAATGATTCTTTCCC 1179128 30 100.0 37 .............................. ATACTTATTTGTAACGATTGTTAAATTGTAATCGTTG 1179061 30 100.0 36 .............................. ATCTAATTTTAATTTTAGAATGATTAAAAAACCATT 1178995 30 100.0 36 .............................. GGAGTAGAAAAGAACCAACACAGAGTTGTTTTGTGC 1178929 30 100.0 35 .............................. TTACGAAACTATGTTCATCTGGCGCTCCTGCTGCA 1178864 30 100.0 38 .............................. CGAGAAGGAGCGGGAGGTTAAATCTATACTGGGTATAA 1178796 30 100.0 36 .............................. TCGGACGTGGGGATGGAATTTAACCGAATAAATTTC 1178730 30 100.0 36 .............................. TCCACGGGACGAACTTGATTTAGTATGGTCAAGTAG 1178664 30 100.0 37 .............................. TATATCCCCTTGCCAGCAATATCTTTTTGTTCAGCAA 1178597 30 100.0 37 .............................. AAAAAACTTCAGAAGCAATTTCTTTTAGCTCTTTTTT 1178530 30 96.7 35 ...............C.............. CCCTAAGTCCAAAGAATGGTTGTTTACTATCGGGG 1178465 30 100.0 38 .............................. AGATAGAAAAGGATAAAAGAACAGGATAATATAAAATA 1178397 30 100.0 36 .............................. TTTAATCTTTCTTTAGGAAAATCTTTTTTAAGAATT 1178331 30 100.0 36 .............................. ATATGTTTAATGTGGTTATTTGGGTGTCCAAAAAGA 1178265 30 100.0 36 .............................. AAAGACAATAAAGTCCCTGATGTAATGTTCCCTTGA 1178199 30 100.0 40 .............................. TCATAAAATTCCATATCAACCACGGCGTGAGAATTTGAAG 1178129 30 100.0 38 .............................. ACAACCCGAAATCTATTATACTGGATTCTTTTGCCACA 1178061 30 100.0 37 .............................. TTGAAGTAATCTTCTACTTCTTTTTGAAATGCCGGTA 1177994 30 100.0 36 .............................. CCTCACGGATGCGCTAAAAACATCTTCGATTGATAA 1177928 30 100.0 37 .............................. GCGCAAGCGTTGCTAATGCCTTTTCGCGGAATTGAGC 1177861 30 100.0 36 .............................. TTTTTCCTAAAAACCATTCTTGTGCGTGCAATGCCC 1177795 30 100.0 36 .............................. CCAGTCTTGCGGCTGTAAGCGTAATACCTACGCCAG 1177729 30 100.0 35 .............................. CCGCAATGCTTTTCTTTTGGCAATCTTTGCAGCAG 1177664 30 100.0 36 .............................. TCTAGATGTGCTGGAAAAGCTGTATCAAGCGTTTCC 1177598 30 100.0 35 .............................. ATCGTTTGGGCGATAATGTTACTGTTTGTAATTAT 1177533 30 100.0 36 .............................. CTGGTATTATCCTTAGTACCTTAGTACCTTAGTACC 1177467 30 100.0 33 .............................. CCAGCTTTGTGCAATTCAGCAATCCGGGTACAA 1177404 30 100.0 38 .............................. TAACGATGTACATTTGTGTTGCGGTTACAATTTTATAT 1177336 30 100.0 36 .............................. CTTGTTAATCTTAGCATGATGCTGAAGTCGCGGAGC 1177270 30 100.0 37 .............................. GAAAAGGAGCCGAAATGAATATTGAGACAACAAAAAC 1177203 30 100.0 37 .............................. TTCTTCCCCCTCAGCGATAATGTTGTGTTTGTAGTGC 1177136 30 100.0 37 .............................. AAAAACATAATATATTATGTTGGAGGAAAAGATATAG 1177069 30 100.0 36 .............................. AGTGTTAAAGAAAAAGACATATAATGTAGAACTGCC 1177003 30 100.0 37 .............................. ACCACCCGAAATTTATTGTATGGAATCCTTTTGTTAC 1176936 30 100.0 36 .............................. TAAGAAACAAAAAATAAAATGATATAATATGATATG 1176870 30 100.0 37 .............................. TAAATTATTGCCGTGGCCCGAAACAATGTTTGTTTTT 1176803 30 100.0 38 .............................. AATTCCCTTTGCGAATTAGGCAATTCGGACAAACTTTA 1176735 30 100.0 35 .............................. GGAGGATCGACACGACACGGGCAATGGGATGTTGT 1176670 30 100.0 37 .............................. AGAACCAAAATTTGACGAAATCCCATTCTAAATTTAA 1176603 30 100.0 37 .............................. ATAATCCTTGCACAAAATTACATAGGTAGATATGCAA 1176536 30 100.0 36 .............................. TGTTTGAAGCATAAAGGTTTAAAGGATGATTGCAGG 1176470 30 100.0 35 .............................. ATATTATACTAATGCAAGGGTTAACGCCGCAGTTG 1176405 30 100.0 38 .............................. TTCCTCTATCCCCCAAAATCTATTAGACACTTCTAAAA 1176337 30 100.0 36 .............................. TTATCTTTTCCTCTTTTTTCAAGACGGTGGAAAAGC 1176271 30 100.0 35 .............................. GAATATGGCAAGCATGGTACTTGATTCTATAGCGC 1176206 30 100.0 35 .............................. TAGTCCACCTCGCAACGTATTGGTACTGCATAGCC 1176141 30 100.0 36 .............................. AAGACAGAAACAGAACGAAAAGCTGAACAGAGGCGG 1176075 30 100.0 35 .............................. ATGAGAACATTGCGGAATATCAGCGTACCTACCGG 1176010 30 100.0 37 .............................. TATATTGATAATGATATATTAATGTTATGTGATTTAT 1175943 30 100.0 36 .............................. GGGTCAGTACCCTGCCTGTTGCTAATGCCTCTTTAC 1175877 30 100.0 38 .............................. TCGGGAAAATATTGGTAAAGAGATTCAGGATTTGTCTG 1175809 30 100.0 36 .............................. GCCTATCATACCACCTATCCAATCGTTGTTGTCTCA 1175743 30 100.0 36 .............................. CGGGGGAAATGAGCGGAGAGGAAAAACAAGCATCGG 1175677 30 100.0 38 .............................. CGATAAGGCGCAAAAGTGGTATAGTCCCCAGCAGTTTC 1175609 30 100.0 39 .............................. TTGGAAGATTGCATTGAAAACGCCTATACATGGAATACA 1175540 30 100.0 36 .............................. GAAGTTAAATCCCTGCGTCCTGGGATTTGAACTGGG 1175474 30 100.0 38 .............................. AGACAATGGACTGCAAACTTGAAAAGAATGGAGTTTAT 1175406 30 100.0 37 .............................. ATTTGTTCAAAAGCCAGTGCCCCGCCAAACCCAATCC 1175339 30 100.0 35 .............................. GCAATGGCTGGTTGATTATTTTACTGGCGGCACAA 1175274 30 100.0 36 .............................. TGGATTCTTAGAGACAACGCCGGGGAACGCAATCGA 1175208 30 100.0 35 .............................. CGAAGGGCATCTATTTTTGCCTTGAATCCTGCATC 1175143 30 100.0 40 .............................. CACCTTGCGCGTGTGAATAATTTTCCACCCCCGGCACGAC 1175073 30 100.0 37 .............................. AGAGTTCGATTTTTCTTTTCTGAACTAGCCATTTTTC 1175006 30 100.0 37 .............................. CAGTGTAAGTAGTTTTATTATTCGCTATGATTTTAAT 1174939 30 100.0 37 .............................. ACATCTCTACAACTTGAACAAACAAAATATTTATCGC 1174872 30 100.0 38 .............................. AAAGACAATAAAGTCCTTGATGTAATGTTCCCTTGAGT 1174804 30 100.0 36 .............................. CCATGTTTCTCGTAAAAATTTGTTTTACAGCGGTTG 1174738 30 100.0 37 .............................. AATGCAATGTCCAGTTTCCCAACATCTCTACAGTTTG 1174671 30 100.0 36 .............................. GCGCCTTTTCAAATTCCTTTTGCGCCTGGCATTCAG 1174605 30 100.0 37 .............................. TCCAACAAACTCTGTAACTGTCCAAATCCAGTTAAAA 1174538 30 100.0 37 .............................. TTAAATGTTGCATTAGGGAATTTACCAAATATGCATG 1174471 30 100.0 36 .............................. TTTTTCAAAAGGAAATGCAGAAGCATTTGATTTTTG 1174405 30 100.0 37 .............................. ATTCGGCCTTTACCATGAAAAAACAGAATACACCTAC 1174338 30 100.0 37 .............................. TACATTGCAGGGATATTAAGTGTCTCTCTATGTGAAT 1174271 30 96.7 36 .....................G........ ATAGAAGATAGGTTGAAAGAAATACATAAAGTCAGA 1174205 30 100.0 38 .............................. AGTAAATACAATTACCAGCAATGTGATAAAAAGTTTGA 1174137 30 100.0 36 .............................. TAACCACAGGAACAACAGAATACTTCCTTCCATCTA 1174071 30 100.0 38 .............................. TAACTTTGTCCTAGTCCATACATTAACTCTAAACGAGA 1174003 30 100.0 37 .............................. AGATAGACGAATACAGGGAAATACGAGAGAAAGACGA 1173936 30 100.0 36 .............................. GGATTATCCCAAAGCACATTGGATCGATGCCGCCTG 1173870 30 100.0 36 .............................. CGGGTACGTACCAGAGCACCGTCTCGTCATGGAAGT 1173804 30 100.0 36 .............................. TTTCCCATATCTCCTTTATAATGTGGCCTCTCCAGC 1173738 30 100.0 37 .............................. CAATAACTTGTTCGTCTTCTGCAACACAAAGATCGCG 1173671 30 100.0 35 .............................. AAACTTTCCCGATTGATACAACTTTCCGGCAACTT 1173606 30 100.0 38 .............................. AGGCCTTCACTAACTGTATTATTAATCTGCACGTTTGT 1173538 30 100.0 37 .............................. GGGTACGGGAGAATTACAAGTTGCACTATTATAATGA 1173471 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 157 30 100.0 37 GTTTTCATTCTACCTATGAGGAATTGAAAC # Left flank : GTAAGTTATCGAAGACTCATGAGGCTGGAGCTTTACAAACTGGAAAAACATCTTATGGAAGAGGAAACATACAAACCCTTTGTTATGGATTGGTGATGTTTGTTATATTGTACTATGACGTCAACAGTAAGCGTTGCGGAAAAATGGTGAAGGCTTGCCGGAAGTATCTTCAATGGGTTCAAAATTCGGTTTTTGAAGGTGAAATATCAGAAGCTGCATATGAAAAAATGATTTTAGAACTTAAAAAAATAATTAAAGATGAAGATAACGATTCAATTATCGTTTATAAGTTCAGACAAATGAAATACTATGATAGATGTGTTTATGGCCTGGATAAAAAGGATGATATTCAATTTATTTAACATCTGTCGACCTTTAATATCGTAAAATCTATTGAAGATCGACAGAAAATGTATAACATTTTTAGAAATTTATGGCATTTTTCCCTTTAAAATTGTTTAAAAAGCGTTGCAGATCGTCTTATCTCGCTTAAATGGCGG # Right flank : CAACTATTTGAGTGGCTGTACCTTACCCGCCGCGAGTTTTCATTCGTAACTATTCAGCGTAATTTATTAAACTACCGGAGATCAGAACGTAATTGCACGGGAAACTTTGTTTCCGGTGAGGGTCTGACTTTACAAATTACAAACTGTCTTAACCCTGTGATTTTATTCCCTATCTATCAGCAAACAGGCGAGAAACCGGAGTTTCTCGAACAATTGCGTTCCCAAACTGGAGTTTGGGAACGAGCCGTGTATCGTTTACGCTGAATAGTTACTTTCATTCTACCTATGAGAATTTGAAACTGGAAAAACCCAGCCGCTATCCGCCCTCGTTTTCATTCTACCTAGTATGGCATTTCATTAAAATATCTACATTGATACCGTCATTGCAAGCGACAGCGAAGCAATCTTAAGTTTTTTGGGAACAAGAGATTGCTTCGTCGCTCCACCCCTCGCGATGACATTTTTTTACGTACACATTTTAACGAAACGATGTACTAGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCATTCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 2046225-2046487 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049055.1 Candidatus Kuenenia stuttgartiensis strain CSTR1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 2046225 37 100.0 37 ..................................... GAAAACGGATTGGAGAACCCACTGTCATCAATTTCAG 2046299 37 100.0 37 ..................................... GCTCATCGCCGTACCAGTAGGTATGGTCGCTTTCCCG 2046373 37 100.0 42 ..................................... AGAACTAAAAAGCAAATTATCAGGGTTAGTTTCTGTTTGTGC 2046452 36 86.5 0 ....G...T.....................-.A..C. | ========== ====== ====== ====== ===================================== ========================================== ================== 4 37 96.6 39 GTGGAAATCATTGACCTGATGTAGAAGGGATTGAGAC # Left flank : ACTCTGATCTTCACTGGCATGACTGGAATCGGTATTCTACGCGGCAGGAGCAGTGGATGTCCCTTGGTGGTGTTTTGGGAACTGTTACCTATGAAGGTAATAACTCCGAATTTATACCCTTTCTCAAATTAGGGGAATTTATCCATATCGGAAAAGGGACGTCATTCGGTCTTGGGAGATATGAAATAATGAAGTCTTCAAATAAGTAAAAAAGCAAAATAAGGAGGTGAATAAGGCGTTTTTCCCTTGTTGCCAGAAAAAAGAGAGAAAGTCCTAAATCCGTGCATAACAGACTATGTTTTAAAGAGTTAACGGATTTTAGAAACATAGTTAAAAAAGGGGGTGGTTACAGGAAAATCATAATCAATTGTGTTTTAACAGGTTAAGAGAATTTTTTAAGAAAAAGGATAAAAATCTCGATGTGTAATGATTACAGATTGTGGAGGTTACAGGAAATGGCCTTGCAAGTAGTTGTTAATTCTAAAGTTACATATGCCGGC # Right flank : CACCAATGGCGGAGTTGAAAGATGAATGTTGCAAGTTTAAAGGAAATAACGAAAAAGCATGAAAGATTTCGGGGAACTGAAAGTATGGCAAACGGGCATGAATTTATTTGATGAAGTGATAAGGGACATAGAAAAATTCCCAAAAACAGAGGTTGGCAAGATAATAGCAAATCAAATAATACGAAGTGTTTTTTCAATTACCGCTAATATTACAGAGAGATATGGAAGAAGGAAAGAGTAAGAGTAAGAGTAAGAGTAAGAGTAAGAGTTTGTACATTATTTATATATTTCAAGAGGGTCTGCAAATGGAACAATTGATTGGTATGAAAAACTAAAAAGATCTGGGTTCATAGATTCAATGGTATTTGTGAAACGGGAACAAACATGCCAGGAGATACGGGCTATGTTGAGTAAGATGATTAGTACATGGGAGAAAGAATGACTTTTTACTTTTGACTTTCACTCCAGCTCTGCTGGTTCGGCCTGATAGAAGGGATGTT # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAAATCATTGACCTGATGTAGAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 2059154-2059926 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049055.1 Candidatus Kuenenia stuttgartiensis strain CSTR1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 2059154 37 100.0 38 ..................................... TTCTTTTCTGCCGCCGAATCTTTAAAACCTATTTCATC 2059229 37 100.0 37 ..................................... TTTTATATCGACCTAAAACTACCCAAACTTTTTTCTC 2059303 37 100.0 37 ..................................... CATACGTTCGGTTAATAAGCTCAGGCTTTGTGAATGG 2059377 37 100.0 34 ..................................... ATAAGGCCGACCAGAAAGCAAATAGCCTAATGAC 2059448 37 100.0 36 ..................................... TAAGTAGTAAACGCCTCAATAGGCTGAATGTAAAAT 2059521 37 100.0 38 ..................................... CATAGCTGGGGTCGTCGAGATTTGAACCTTTTCTGGTT 2059596 37 100.0 34 ..................................... AAATATCGCTTGACCTTTTTTGATAATTTCTTAT 2059667 37 100.0 38 ..................................... CCTTTATTAAACGCCTTATACTGCCGTCCGTTTTTAGC 2059742 37 100.0 39 ..................................... TTTCTGCTGATGTTGTATACTTTTCATCTTTCGAGAAAT 2059818 37 100.0 35 ..................................... AAACGTCCCACACTTCTCTAATTGTGGCTAATTTA 2059890 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 11 37 100.0 37 GTGGAAATCATTGACCTGATGTAGAAGGGATTGAGAC # Left flank : TGTAATGGAGATATAACCAATGTTTTATTTGGTTTCCTATGATATTCCGGAAACAAGAAGAAGGACAAAGCTCGCAAAAATCCTGGAAGACTTTGGCGACCGGGTGCAGTATAGTGTATTTGAATGTATTTTGGATGAGAAGCTTTTAGGCAAAATGATAAAAAGAATACAGGAGATTATAATCGCAGAAGACGACAGTATCCGTATTTATTCTATTTGTGCCGGGTGTGAAAAAAGGATAGAAGTAATGGGAAAGGGAAAGGTCTCAAAGATTGAAAATATATACGTAATTTAAAGTGTGATAAGCATTTAGCGGATTTTTAAAACATAGCTAAAAAGGGGGTGGTTACAGGAAAATCATAATCGATTGTGTTTTAAGAGGTTAAGACAATTTTTTAATGGAAAGGATGAAAATTTCGATGTGTAATGATTACAGATTGTGGAGGTTACAGGAAATGGCCTTGCAAGTAGTTGTTAATTCTAAAGTTACATATGCCGCT # Right flank : CGCTTCAATTAAAAGGGCGAGGGTCACACCTTGATTGGTGATTAATTTGTTGATAATAAAAGGCAATTTTTATATCTTGGCTGCCATGACAAGGCCATGGCGCATAGAATTTGAAGGGGACTTACTATCACATCTTATCACGGGGAAATGAGCGAAGGAATATTTTCCATGACAATGACGATCGTATTTCGTTTCTAGATATTTTGGTAAACATGTCGGAACGGTTTGAGGTTGAAGTATATGCCTATGTTCTAATGGATAACCATTATCATTTACTCCTTAAAACCAGTAAAGAATCCACCCGCGGAGCAGGTGGCTTTGGGATAACCCCTATAAGGGGATGAAAATGCCTTCCTTCCAAAGGAAGCAAGGTTGAGTTGTCCCCATTTTAAATTTACCGTTGTGACTCTTCTTGGCGCTCTTTCTGCTCTTGATATTTCACATATTTACGTATCTTTTCCGTATCCAAACCAACGGTATCGACACAGTAACCTCTCGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAAATCATTGACCTGATGTAGAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 2955704-2952952 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049055.1 Candidatus Kuenenia stuttgartiensis strain CSTR1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2955703 29 100.0 36 ............................. GATGGTAAGCCTTAATCTGCAAATACAGTTGAAAGG 2955638 29 100.0 36 ............................. AATAATTAGAACAACTAGTATGCCCCGTTATACCAC 2955573 29 100.0 37 ............................. AAGCAAATAATATATAATATTTTGTTGCATATTTAAC 2955507 29 100.0 36 ............................. CAATTTTATTCAAACCCTTTAACACCCTTATGTTTT 2955442 29 100.0 35 ............................. GATTTATACAGTATTTCAGACAACATAACTATTAG 2955378 29 100.0 37 ............................. GAAGGATACCAGGATAATGGGCAACCGTTTTTCTCAG 2955312 29 100.0 36 ............................. GAGCATCCATTTTATATAAATTGCCAGAAAAAGAAA 2955247 29 100.0 36 ............................. CCCGGATGAAATACTCCGAGAGGTTCTGTATTTCCC 2955182 29 100.0 36 ............................. GTTGAATGGCTGGGGCTGGTAATTACATCGCGATGT 2955117 29 100.0 36 ............................. TACTTCAAGAAGGTTAAAACTATGAATATTCCACGT 2955052 29 100.0 35 ............................. TAGCCAACTTCTGTCGCATTCTGTTCTAATTCAAC 2954988 29 100.0 34 ............................. TTATTCCCTGCCTTGACAGTCCTCTTGTTATCAT 2954925 29 100.0 35 ............................. TAGGTAAAAACTTGTGTGTTGTCCACAGCCAAACA 2954861 29 100.0 37 ............................. CCGCCAAAGCCGAAGCAGAACGGCAGAAATTGCTCGA 2954795 29 100.0 36 ............................. CGTTTTTGGGCGGTTTACGAACATTAAGGAGGCGAA 2954730 29 100.0 34 ............................. TGAATATGCGCGGATAAGGGAGACATTAGAACGC 2954667 29 100.0 37 ............................. ATTATGAGACTATTGCGGATGCAAAAAAACAGACGAC 2954601 29 100.0 37 ............................. TTGTGTTATCGTTTCGGCCTGCTTACGCGCAATAGTG 2954535 29 100.0 36 ............................. TGTGTTATAACATTGATATAACACTGTTACAAAGTG 2954470 29 100.0 35 ............................. TTGCCTCCCTACTGCATACGCACTATACCTGCTTG 2954406 29 100.0 36 ............................. ACTTTTCTAGTATAGTTGTGCCATCTGTACGCATGC 2954341 29 100.0 35 ............................. TTTTTACCTCACAGAAGCTGTAAAAATTTCTTCGA 2954277 29 100.0 36 ............................. AAAATACACTAATCTTTTTTTTTGTCAATGTGAATA 2954212 29 100.0 36 ............................. AAAAAACTACCCATACCGCCATACGTTTTGGGCGCA 2954147 29 100.0 35 ............................. GATTTTGTGTTCAAAATACTTCCACCTTTGTTCAG 2954083 29 100.0 35 ............................. CAATAAAGCGAGGCGATATAGATCAGATGTCGTTC 2954019 29 100.0 36 ............................. ATATATATCTCCTGTAATGCCGGTAATTGATTGCGT 2953954 29 100.0 36 ............................. AACAGATGCCCTTCGCTTGTTGTCGGCGTTCCGGTA 2953889 29 100.0 37 ............................. AGCTATGGAGTATCAGTAAAGCCTGATGATCTGCGGC 2953823 29 100.0 35 ............................. CTGTGATAGTAAACAGCCTTACCGTCTTTTGCGGC 2953759 29 100.0 37 ............................. AAATTTTAGGAGGTAAAATAAAATGTTGGAATTAGGG 2953693 29 100.0 36 ............................. TTGTCTGGTGGCGGTGATGCTGCTAGTTATACTGAT 2953628 29 100.0 33 ............................. GGTCTATAAGTAAAAATAGCCCCCGTATTACCG 2953566 29 100.0 37 ............................. GTACTTGCTACAGGCAATTTAATAAAATCTGTTTCAA 2953500 29 100.0 36 ............................. GAAATCCATACGCACGGGGAATTCCAGTAATAAGTC 2953435 29 100.0 35 ............................. TAGTTATGCTCAATACACTGTTCCCCGCCTTCGTC 2953371 29 100.0 38 ............................. GTCGGTATCAACGCCCTTGACATGGGGACAATTTCGAC 2953304 29 100.0 37 ............................. GATCAAAAAGTTGATGTGTCGGTCGCGCTTAAACTCC 2953238 29 100.0 36 ............................. GAAAAATAAGCCGGCTTAGAGCCTGAGTCTCTTTGC 2953173 29 100.0 35 ............................. TTTAAAAACCATTCTAAATCTTGTTTCCCAGAAAT 2953109 29 100.0 35 ............................. CACATACACATTGTGTTCTGATACCGAGCCGCAAA 2953045 29 100.0 36 ............................. CTATCACGGGCAATTCTAAATTGTTCATCGACGCTT 2952980 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 43 29 100.0 36 GTCTCATTGCACCTATAAGGAATTGAAAC # Left flank : ATACAAAATTCTGTGTTTGAGGGAGAAATTACCGAAGCCAGACTGGAAGAATTGAAGATAAAGGCAAAGAAGATCATGAACGAGGAGGATAAGGACTCACTCATTGTATTCAAATCAAGAAATGAAAAATGGCTGGATAAAGAGATTGTTGGATTTGACAAAAGACCGGTTGATAATATATTATGACTATTAGGTTTGCTTTGACTGTTGGAATACAATGATACGACAAAAGTATTTCATTGTTTGGATAAGTAAGTGTTTCGTGATGGCTAAATATTATAAAAAAACCTGTCGACCTTAGGGTAAATACCTGTTCGTACGTCTCTGCAGGTCTATTTAGATACATTGAAATGAAGGTTATCCCGTCATGAGATGACAGTTTAAGTACTACATGTCGACCTGCCGGGTTTTTTACATAATGAGAGGTAGACGAGCAAAATGGCCATTTTTCATACGAAAAAAAGTCATAAGTCTCTGTATTATTTGTACCCACAAAACTG # Right flank : TAACATCAATACAGTAATCTAAACGAGAAATATTCCCGTCTCATTATTGAAACATGGATGTCAAGAATAAGGGAAAAAACTAATGTCGCGTCTCATTGAACCAGTTGTTTAAGATGTCTATTTTCTCAACTTGACGGTGCCGCTATGTCTATAAACGTAATAATGGCAACGGCTGTAGTGCGCCAGAGTACCTGTCCTGTGTTTTAATAATACCATTTATAGCCGTTGCCAACATTTTTTCCCCCTTTTTGTTGAAGGGTATGGTGCGGTAAAATGCAAAATTGTGTATTATGCATATGGTATTGTTTTATTTTCGTTTCAAACCAAAAGTTCATCACAAACAAAGCGAAACTGAATTATCAAAAGAGGCAAAAACGAGAATGCCTTGAAAAGCCTGAATGCGCTGTTAGAATAAAGATGTTTCGTAAGTATTTAAAAAATCTTAAGACACATTAAAAACCTTGAAAATAAATACGCACTATTTACAAATAATTGCCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCATTGCACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //