Array 1 34822-35479 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSDM01000025.1 Dorea sp. AM58-8 AM58-8.Scaf25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 34822 32 100.0 34 ................................ ATCGATGTCGTAAATAAAATCTCCCTCGTACACC 34888 32 100.0 33 ................................ ATCCTCCTTATCTTCTAACAGTTCCGGGTTATC 34953 32 100.0 34 ................................ CAAGACTACTGCCACATCGTACAAAGCAGTCGGC 35019 32 100.0 36 ................................ AATATAACACCACACATCATTATGTCCATCTGTGAC 35087 32 100.0 35 ................................ CTGATTTTGGTTGCTGTTCTTCTGTGCCGGTCTGC 35154 32 100.0 34 ................................ AAATAAACAACTCGTTCCTTGTCGCCTTTACCAC 35220 32 100.0 34 ................................ ACCGGTAGCAATCACGTTCTTGCTCAGCTTTATA 35286 32 100.0 35 ................................ TAGAACGTGGAGCAGAAAAAGCCGGCTACATTAAT 35353 32 100.0 34 ................................ GGCAGATATATTAATTGCATTAATGGTCGCAGTG 35419 32 96.9 0 ...............................C - Deletion [35451] 35451 29 90.6 0 ---............................. | ========== ====== ====== ====== ================================ ==================================== ================== 11 32 98.9 31 GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Left flank : CCAGTATTTCTATGGAAATGAGGTGGAAAGATGCTGTTGTTGATTACTTATGATGTAAATACGGAAAATGAAGCTGGAAAAAAGCGACTTAGAAAAGTTGCCAAGCAATGTGAAAACTATGGAAGAAGAGTACAAAATTCCGTATTTGAGTGCATTGTAGATCAGGCACAAAGTGTAATGTTAAAATCTTTGTTAACGGATATTATTGATGATAAAGTAGATAGTTTGCGATTCTATTATCTTGGAAATAATTATAGGACCAAGGTAGAGCATATAGGGGTAGAACGAGGAATTGCAGTTGATCAACCTTTATTCCTGTAATTTACAGGTGCGAGTGGCAAATATACATAAAATTACTAGGAGACTCGCACCAGAAAAAATAAACAAATTTGAGTGCGCTTTTACATATACAAGATGGTTGTGATAATATGCAAAAGTGTATTCAAATATATTTGTAAATATTTTATAAAAATGGGGAGATATTTTTGTGAAATATTGCT # Right flank : TTATTT # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:-0.29, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.80,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 1 27813-27384 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSDM01000027.1 Dorea sp. AM58-8 AM58-8.Scaf27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 27812 32 100.0 34 ................................ ATGCGGATGCTGTGTCGCATACCACGTCCCACCT 27746 32 96.9 35 ...........C.................... ATGGTTACATATCCAGATGCCGTGAGCGTAAAGTT 27679 32 96.9 33 ...........C.................... TTTCCTAACATAATCTGCTGTGCCCATAACATT 27614 32 100.0 36 ................................ TCTATCCCTGCACTGTTGATCGTATCAGAGAGCTCA 27546 32 100.0 33 ................................ TGATGGAAGTATTTATAAGCCGAATCTCTTAGA 27481 32 93.8 34 .......T......A................. CGCAAGTCCTAACGTATGTTTTGCTTCACTCATC 27415 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 98.2 34 GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Left flank : CATTTTTTTATTATTAGTAAGTGTTACGTTAGCGTCACTTCCCTGCGGTAAGTGTTACGTTAG # Right flank : AAAAATATCTGCTGAAATTTTTGCTGAAATTTCTAAAGTGTTATTAATTAAATTACAGATTGTTAAAAAATACAGAACAAACATTCGGTTTGTTCTGTACTTTTTTTATCCTGAATGATATACTGGACAAGTAACATACTAAGAACACAACTACTATTTCTAAAATATCACCGCTAGCTTAGAGCGGATCAGGAGAAATCATATGGATCATTTTGAATTAGTATCTGAATATCAGCCAACTGGGGATCAGCCGAAAGCCATCGCAGATCTCGTGGCAGGTTTTAAAGAGGGGAATCAGTGCCAGACATTGCTTGGCGTCACCGGATCCGGTAAGACATTTACCATGGCGAATGTCATTCAGGAATTGAATAAACCAACGCTGATCATTGCGCATAATAAGACATTGGCTGCACAGTTATACGGAGAGTTCAAAGAGTTCTTTCCGAATAACGCAGTGGAATATTTTGTCTCCTATTATGACTACTACCAGCCGGAGGCTT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCCTTGCGGAAGTGTGGATTGAAAT # Alternate repeat : GTCACTTCCCTCGCGGAAGTGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA //