Array 1 82985-82567 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPAF01000003.1 Bacillus sp. 103mf, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 82984 27 100.0 38 ........................... AGACTGATAAGCAAGAGGCAAAGCTAAATGGTGAATAT 82919 27 96.3 38 ..............T............ GGATCACAGAAGTTTGCGTTGCAATGGAACAAGCCGGG 82854 27 96.3 39 ...............C........... AGCTCCACAACCCTTCCACTTCTTGGTCTGGCAGCCCAA 82788 27 92.6 38 .........A...C............. ATCTATTAAAGATAATTAACTCATCAACAGAATTATAT 82723 27 92.6 38 A...............G.......... ATAGAGCTTACATGTATCTTAGAAACTTAGTGTCATAG 82658 27 88.9 38 .......T........G......G... ATGCGTGGTACATTTGCATATTACCTTGATAAATTCCG 82593 27 88.9 0 .......T.............G...T. | ========== ====== ====== ====== =========================== ======================================= ================== 7 27 93.7 38 GTTTTATCTGAACTATATGGGATATAA # Left flank : GGAAAACGTAAAATTCTTGCTTTTTTTATTCGATTTATTCTCAAAGATATATAGGTTCTCTGCGTATACTACGTTTGATGTTTTTAGAGCTTCTTTGATAAAACTCACAAACATAAAACGATACGAGAGAGGAATTACTTTGCAAGTCAAGCTTACTTTCAACCTCATCATTTTCCTCCTTAATCTTTAATATAGAATTATTATAATGCATGCAAAAATTAAGATACAATAAATATGTAGAAATAAATGGAAAAAACTTTCTGTGCAAAGAGAGATTTTTTCTTGATCCCATATAGTAAAGATAAAAATCATGCGGTACCTCTGTAATTTTGCAGTGAACCTCGTTTTTGTTAAACATGCAGAAACCCTTACTATGATAAGGTCTGTAAGTGTTTTTTTAGAGAATCCAAAAACATGATCGATGATTCACTGCAAAATGATAGTTGCTACACGTAGTAACATGTTGCTATCATAAGGTGTATCCCCTGTATATAGATAGG # Right flank : CCACACCACCATCAAGTTAATAATGATACACACTCCTATATTCCTTTTGAACACGAACTTTTTTATAGGAACCATGCTTTACAACATGACGAGTATCCATCTCTTTATATTTTTTAGTTTGAAACATTTCTGAAATATCTACGATAATTGTATTAGTTAGAATATTAACTACATAACCAGTTAATTTTAATGAAGGATTCTTACGATGTGGAAATTGTACGTAGTCACCAATTTTAATAGTTGGAACTGAAATAGCTTTTTTCATACAATAACCTCCAAATTTAAAATGTTATAGACTAACTTTTAAACCATTGAGTGTACTTTATCTTTTATGAACTTATCAGCGGTGATATAGAGAATGAAAAGATCAGAACTTAGTGTAATAGTCACTCGATCTTTCATACGTTTCAGAATTATAATGTCTTGTTCATCTTGCTCGAACATTTTCGCATACCCTAGGATTTGATACACCCGACCATCTTCTCTATAAATGTAAAATT # Questionable array : NO Score: 3.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATATGGGATATAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 89715-90400 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPAF01000003.1 Bacillus sp. 103mf, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 89715 28 100.0 38 ............................ TAACATACTGATTACTCCCGAAACCTGGTTCTTTCTTA 89781 28 96.4 37 .......................A.... TGGTTGTGCTTCACTTGGATCAATTGGTACAGTTAAC 89846 28 89.3 37 ...............CA......A.... TGTTTGCCCTGCGAACATGACAGATAAGCTCTCAAAT 89911 28 100.0 38 ............................ TCTCGATAGTACTAGTTGGCAGTGTGTTGGCTGGTACG 89977 28 89.3 39 .......C........T......A.... GAAAACATATTTATAACCTTTATACTTGATTGCTTCTGC 90044 28 89.3 39 .......C......G........A.... GTTCTTAATACCCCAACGATCCAATTCAACTACATAATA 90111 28 92.9 38 .................C.....A.... GATGTAATTAAAGAAATGCCCTTCTAATGCCCATTTCT 90177 28 89.3 37 ................A..A...A.... GAGTGTTATGGCTGAGGTGTCTTTAGGAAAATGTTTC 90242 28 89.3 38 .......C........T......A.... GGATCTTGTTGCTTCGCTCCCAATATTATGTTTAGCCA 90308 28 89.3 37 ...............CA......A.... TCTAGAAGTCACAAATTTTAAGAAACTGGAGTTCTTT 90373 28 89.3 0 .........T.G...........A.... | ========== ====== ====== ====== ============================ ======================================= ================== 11 28 92.2 38 GTTTTATTTGAACTATGTGGGATGTAAA # Left flank : AAACTTCTACTAAATGATATGGGAAATACAAAAGCACAAAGGTTGTTGCGTGATATTGATAATTATCAAGTTATTCCCTGTTCTGTATATACAGAGAATCGTGCGCTATTTACTACATTTAAACAGGAAAAAGATCCAAATCAGCGAAAATTATTACGAATACAAATCGAAAAGCTTACAACTTCGATTTCTATACAACAAGTTCAACAAAACAGGATAGAAACGAAGGAAATTGATATTTCTGGACTTCAATACATTCGTATTTTACATTGCAAGTACGATTTTGATAAAGAAAAGATAACAGGAACAGGAATTGTATTTCCGTAATTTTGCAGTGAACCTCGTTTTTGTTAAACATGCAGAAACCCTTACTATGATAAGGTCTGTAAGTGTTTTTTTAGAGAATCCAAAAACATGATCGATGATTCACTGCAAAATGATAGTTGCTACACGTAGTAACATGTTGCTATCATAAGGTGTATCCCCTGTATATAGATAGG # Right flank : ATTCCGTTTACATCTTGACTATACATAACAACTACTTAAGTTTTATCTGAACGATATGGGAATTTGTCAAAAGAAATGAACGGAACAAAAAACATGAAGAGAGTTTAGTTAACTATCCAGAGTGGGATATGCTCGATAGTTAAAACCGAATCCAACCATTGAAATAGAGTCCTATATTAGGACTCTATTTCAATAGCAAATTCATTTGTTATTTATTGAAAAATCCTTAATTTTAAATACAGTCTTTTTTAAGCACTTGTGAACCAATATACAGCAAAATAAATTTCTTCTGTTTCCATAACAAAAAACACATCGTTCCATTCTGGTTCATAAGCATAAGCAAATCTGATTCCATCACTAGGAAATTCAATAGGTTTGATAAAAGGAGCATATCTGTTTCTCACTGTTATAAATTCTTCTTTGGATATCACCTTTAATTCTTTTTGTTCTTCCCTAATTTTTTCTTCGTACTCCCACATAGTCATTTCTTTAACATTTTT # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTGAACTATGTGGGATGTAAA # Alternate repeat : GTTTTATCTGAACTATTTGGGATATAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //