Array 1 23630-19921 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWCM01000086.1 Mycobacterium persicum strain 1010001469 NODE_30_length_70483_cov_32.1687_ID_1586, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ========================================= ================== 23629 38 100.0 35 ...................................... GACGAGGACGCCACCGATCAGCTGTACGCCGACCA 23556 38 100.0 37 ...................................... TTCCCCGACAAAGGCGGCACCACCCAGCCAGCCAAAA 23481 38 97.4 33 A..................................... ACGCTGCTGCGTAACGATGCGCCGTTGGTGGCC 23410 38 97.4 35 T..................................... CGAACAGTGTCCCCCGGCTGGGCCACCATTTCCGC 23337 38 97.4 35 C..................................... TACTCGTGCACGCCAAAGGCCGCGCGCACGACGAA 23264 38 97.4 35 C..................................... TCTTGGAGCTGGCCAATGCGTAACTCTGACCCGCG 23191 38 97.4 33 .............A........................ TACGACGAAGCTGACGAACTGCTCTACGTCGGA 23120 38 97.4 35 T..................................... TTCGCGGTTGTGCCCGGGAAATGGCCAGGGTTTGA 23047 38 97.4 38 T..................................... CATCAGCCGGCGTAGAGCGGGCAGGATGTCGGCTGCGA 22971 38 100.0 35 ...................................... CCCCGTGTGCGTATAGAGCCAGGCGAGGGTCTCGA 22898 38 97.4 35 C..................................... CTTGCTGTACCCGTCGCGGGTGATGGACGTGTACA 22825 38 97.4 36 C..................................... GGGTTAGGGATTTGCGACCAGTGCCACCGTGAGGGC 22751 38 100.0 35 ...................................... CGATCGCGTGGGTGGACCACGGCTGGGTCGGGGAC 22678 38 100.0 37 ...................................... GCTACCCCCGCCCTACGTGTGTTGGAGACACCGTGGC 22603 38 97.4 35 C..................................... AAGAAGCGCCTCGTGGCCGGATTCTTCGCCATGCG 22530 38 100.0 36 ...................................... TCAACGTTGAGGTCCCGCTTGAACTTTGGCCCGTCA 22456 38 100.0 36 ...................................... AGCGCGAATCACGCGGTGTGTGCGGTATGTGGAGAG 22382 38 97.4 36 C..................................... CCGGGCACCGATCCGACATTGATCCCCGGAGGCGGG 22308 38 100.0 35 ...................................... CGCAATCTCACTATCACCCGAAAACTGGTGTGCTG 22235 38 100.0 35 ...................................... GACAAATAGGAGAACGATCGCAATGAGTGAAACCA 22162 38 97.4 34 C..................................... TTTGGAATTCTACCTCCACAAGGCCCTCTATATC 22090 38 100.0 34 ...................................... ACGAGTTCAAGCTCATCATCGGCACCAGCGCAGA 22018 38 97.4 34 C..................................... CAATTCGCCGGGGCCGGTATCGTTTGAGATGAAT 21946 38 100.0 35 ...................................... AAATCTCATCCGTGGCCGGCCGTGGTGCGCCAAGC 21873 38 100.0 36 ...................................... TACGACCACCCGTCCGAACGCGCCATCCAGATCGGT 21799 38 100.0 36 ...................................... ATCCGAGACGCCGCTATAGCAAGCACCTTTGCGCCG 21725 38 100.0 35 ...................................... AGATAATCGGCTAGAGAATCTTGAACTGTGGTCAA 21652 38 97.4 35 A..................................... CGAAGTACAAGCTTTCGCGTGGGACAAGCAGACCA 21579 38 97.4 36 A..................................... ATCACTGATCAGCCGCTGATTGTGTGGTCCGCGCAT 21505 38 100.0 35 ...................................... ATTTGAGAAAGGAAACTCCCATGGCCATTATTGGG 21432 38 97.4 41 T..................................... CTTGGCGCACCGACCGAAGCCACCCCCGGCCAAACCGCGGC 21353 38 100.0 36 ...................................... GGGTGAGCCGACGCCCATTTTGGTTCCGTCTTTGCA 21279 38 97.4 35 C..................................... CCGGGTGTGGGAGCGCAGGGAAAGCGAGGGAAGAT 21206 38 100.0 36 ...................................... CTAGGTGTGGTGCGTGCATGACGTCGTGGGGTCCAG 21132 38 97.4 37 A..................................... CAGATACCCAACTATCCGGTCCACCATCTGCCGGCGC 21057 38 100.0 37 ...................................... GCTCCGGTGGACAGACGTCAGAGATGGGGCCGCGCCC 20982 38 100.0 34 ...................................... CAGCCCGGAGCTATAAGGCTTATACGATAACGTC 20910 38 100.0 35 ...................................... AGCGGTGAGACACGCGACGGCTGGAATGTAGCCGA 20837 38 100.0 35 ...................................... TTTGGCCCTGCACATCACCCGGACCATGGACCAGG 20764 38 97.4 37 A..................................... AGGTTGAGCCATGTAGCAGTCCCGCTCCACCACCGCC 20689 38 97.4 35 .............G........................ CAGTCGTCGGCGCGCGGTCGAGATCCGGGCGCGTA 20616 38 100.0 33 ...................................... GGCTAACCCCCCGCGGGTGAGCCCGCCGAGTGG 20545 38 100.0 35 ...................................... CGTCGTAACTCCTCCGCCGCGGGATCCGCCGTGGA 20472 38 97.4 36 C..................................... TCATTAATCTCCAACGTCACCGGGCCTGCCGAATTA 20398 38 100.0 36 ...................................... AACGGAATAACGTCACGAATCACATCGTCGATCTGC 20324 38 100.0 33 ...................................... ACCGACGCGAGTAGCCGACCCGTCGAGTTGCCT 20253 38 100.0 37 ...................................... TGCCGGTGCTTGCCGACCCACGCAAGATCCTCGTCGC 20178 38 100.0 35 ...................................... CTTTCAGGCGGCGATGCGGAGTAGGTCGATGATGG 20105 38 97.4 35 A..................................... ATTTGACCCGAGTGTCCAGCGATACCGCACACGGC 20032 38 100.0 36 ...................................... ATCCGCGAAGCCGACCTGGCCGCCACACCGACCCAC 19958 38 86.8 0 C.....A..........T......T............T | ========== ====== ====== ====== ====================================== ========================================= ================== 51 38 98.6 35 GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Left flank : ACTTCAGGCGCTTCTTCTGGCACGGCACCTTCGCGGCGATCTGACGCATTATTTCCCATATAGAACGACAGGGCGGTGAGATGGAGATACTAGTGGCCTATGACATCAGCACGGCGTCACCTGACGGGGAGCGTCGTCTTCGCGGGATAGCGAAGGTTTGCGAGGGGTACGGTCAGCGTGTCCAAAAGTCAGTTTTCGAATGTCAGCTGGAAATGCGCGAAGTCCGCCTGCTGATAAATGACGTTGAGAAGGTTATCGACCCGAAATCCGATCGGGTAGCCGTCTATAGACTGCGTGAGCCGTACCGTCGCTACGTGGTGACCCTTGGCCGTGGGCCAGAGGTCGACTGGCGGCACCCAGTCATTTTGTGAAGGGGCGGACCCGGGTTAGACGTGCGACCCGTAGTAGATCCGCCCGAGGATTCGGGCTCCCAAAGCGCAGAACGGTTTGTTGATAAGTTGATGATTGTCGCGGTCGCCGAAAAATAGCTGTTCGCGAAG # Right flank : CGACCCCACGGCTCACACCATCGACAAGGTTGTCAAGCGTTGGATGACTTTCTGCGGCGCCGATGATTCGAAAGATCAGGCTCGACAAATGACCCTAGTGGTGTGTCACGCAAATAGTTAACTGCATGTTCGGTATTCTGGATCGGTGAGCGCATCACCTGCAGTTGCTTTGGCCATGTCGGTTGGCGAGCGTGAAACGTTGGAGAGGTTGGCGCGGTCTGATTCGGTGCCGCATCGGCAGGTGATGCGCGCGCGTGCGTTGCTGATGGCTGCTGACGGCGTGGCGAACACCCGCATCGCTGAGGAGGTGGGGGTGACACCGGTGACGGTGCGTAGCTGGCGCAAAAGGTTCAGCGAGGACGGGCTGGCCAAGCTGGGACAGGTACGTAGAGGACGCGGCCGCAAAGCCACGATCTCAGACGCGCAGGTCGCTGAGATCGCGCGATTGACCACCGAGGAGACCCCGCCCGGCCACACGCATTGGTCATGCCGCACGATGG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.84, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.90,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //