Array 1 10827-12258 **** Predicted by CRISPRDetect 2.4 *** >NZ_OANN01000124.1 Corynebacterium belfantii strain FRC0043 isolate FRC0043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10827 29 96.6 32 ............................C CGTGAATCCACCCTTGGCTAGCTCAGTCATAG 10888 29 100.0 32 ............................. CTTCCCGACGATTTGGCGGAAGTAAAGCTTTT 10949 29 96.6 32 ............................T ATGGAAAACGCAGCTCCCAATTATCTTCCCTG 11010 29 96.6 32 ............................T CATCCTTGTTAGCACGCGCCTGACCGATACCA 11071 29 96.6 32 ............................C GAACTTCCACGCCTCTTGCCCCTCACCTGGGC 11132 29 100.0 32 ............................. CTGCAGCAGCGCCGTGCCGATCTTGTCCAGCC 11193 29 100.0 32 ............................. CATTCGATGGCGAAAGCGCGTCTTGCTGCTGA 11254 29 100.0 32 ............................. TCGATTCGATCAATCCATTCGATTAGGTTGCG 11315 29 96.6 32 ............................C CACTAATCACTACCGCCTTCCATACCTTCAAG 11376 29 100.0 32 ............................. AGGCGCGAGTACTCCGGCTGCTGCTAATAGCG 11437 29 96.6 32 ............................C GACCTTACCGCCGTAAACGTTCAGACCACGGA 11498 29 100.0 32 ............................. CAGATCACCGGAATCCCACTAGACCAAATGGT 11559 29 100.0 32 ............................. TACCGGAGGCCGACCTTCCGAAGATCACATCC 11620 29 96.6 32 ............................T ACACAGCAGACATCGGGGTCAAGAAGGGCGAA 11681 29 96.6 32 ............................T ATTCCCTGTGGCAAGCGCAGCACCACCGGCAG 11742 29 96.6 32 ............................C GCCCTGTTCTATCCGCTGAATGGTTGACCGCG 11803 29 100.0 32 ............................. CAGATCACCGGAATCCCACTAGACCAAATGGT 11864 29 100.0 32 ............................. TACCGGAGGCCGACCTTCCGAAGATCACATCC 11925 29 96.6 32 ............................T ACACAGCAGACATCGGGGTCAAGAAGGGCGAA 11986 29 96.6 32 ............................T ATTCCCTGTGGCAAGCGCAGCACCACCGGCAG 12047 29 96.6 32 ............................C GCCCTGTTCTATCCGCTGAATGGTTGACCGCG 12108 29 100.0 32 ............................. CAGATCACCGGAATCCCACTAGACCAAATGGT 12169 29 100.0 32 ............................. TCGCTTCCGCGACTTTAAGCCGCGCCGCATTC 12230 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.3 32 GTTTTCCCCGCACCAGCGGGGATGAGCCG # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGTCTGCCAGCCCAAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAAAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAAGACTAAGCAAATTTGGGTGAATAGCTGATCCTAAAACAGTAGAAATAAAGATGAAGTAGAAAAATTGCTGAAACAAAGTTATATGTAGTAAGCTCTAACTGTCTCTAAACATGCAGCTTGATAAGG # Right flank : GTTTAACAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATTTTTGTTGAAGAACGGGTTTTTGGATCTGTGTTTTTCATTCAGAGGAATCAGTAAATGATGGGTCTACTAAAAGATTTTGAAAAAACTAACTTTTAATATCTAAAGAGTGTATTCTGTGGAGAAAGAGCTTCCTAAGTTGGGGGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTGCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCTTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTTAACAAGATGAGACGTCGTCTTGCTCGAAAAGGGAA # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15451-16759 **** Predicted by CRISPRDetect 2.4 *** >NZ_OANN01000108.1 Corynebacterium belfantii strain FRC0043 isolate FRC0043, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 15451 28 100.0 33 ............................ TGTTGTGTGGGCGGTGGTGTGCGGTTTGGCGGG 15512 28 100.0 33 ............................ CCCAAATTCGCGCTCTCCACACAGTACCCACAC 15573 28 100.0 33 ............................ CGACAACCGTGGGGTGGTGATCGTGCGGCGTGC 15634 28 100.0 33 ............................ GGGTGAGGTTCTCACCTCGTGAGTTTTGGCCGA 15695 28 100.0 33 ............................ CTAAAAGATGATCTCATCTATGAGAATGTGCCA 15756 28 100.0 33 ............................ GGGTGAGGTTCTCACCTCGTGAGTTTTGGCCGA 15817 28 100.0 33 ............................ CTAAAAGATGATCGCATCTATGAGAATGTGCCA 15878 28 100.0 33 ............................ GGGTGAGGTTCTCACCTCGTGAGTTTTGGCCGA 15939 28 100.0 33 ............................ CACTATTGCCATTAACCGTTTGGCCTTTCAGCC 16000 28 100.0 33 ............................ CATCTCCCAAGACACTGGTGACCCCCGTGCAAT 16061 28 100.0 33 ............................ GCGACGGCCACGCCGAGCGCGACGGCTAGCGCA 16122 28 100.0 33 ............................ CAGGAGGGGATAGTGTGACGGCGCTTGCTTATA 16183 28 100.0 33 ............................ TAAGCGCCTTATCGAGGCGTGGCAGAAAGAACT 16244 28 100.0 33 ............................ CCTTCGGCGAGAGAGCGATTCCACGCACATGCC 16305 28 100.0 33 ............................ AAGCGGTCACTACTGGTGGCGTGGTCTAGTGCG 16366 28 100.0 33 ............................ CAAGTTTGAAACCCGGCCATACACGCCCCTTCG 16427 28 100.0 33 ............................ CGTCTCAGCAGCCTCCATCGCCTCCGCGATCGT 16488 28 100.0 33 ............................ CGCCTCGAAGCCTCCGACCTGCGGCGTGTATGT 16549 28 100.0 33 ............................ CGTGTTGGTGCCCACGACGGGGAAATCAAACCG 16610 28 100.0 33 ............................ CGAGAGAACGGTTTCGGTACAGCGGGGCGCTGC 16671 28 100.0 33 ............................ CAGATCTTGTTCTTGCTCCGCCTCGTGGCATTA 16732 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 33 GTCTTCTCCGCACACGCGGAGGTATTTC # Left flank : GTCGGCATCTCCGCCGTGAGATTCATTCAAGAAAAATAACGGCAGGTATGCTCGAAGCACTAATGGAAGTGCTGACACCGTATCTTCCAAATCGTAATGACGATCGGCTAATCGGCGACAGTGACGAAGTCAAAGGGCATATACAGTATGGCAAGGAGATTAACTAGATGTTCGCTGTACTTTACCTTCAGGCAGCACCTGATCATCTCCTTGGTTACGTCACCCGTTTCCTTACTGAAGCGGATACAAGCCTTTACGTTGGAAATGTTTCCAAAAATGTAGCTTCAAATTTATGGATTCGTGTAACAGAAGCTATTAAAGATGCTCATGCCACAATGGTTGTGAGCGATAATTCTCGTGAGCAAGGTTTCTCAATAATGACGACAGGTAATAGCACACTACAAGTCCTTGATGCAGATGGGCTGTCCGTTTTGGCCTCACGCCCTGGACGAGCCGCTGTAAAAATACATGGTCTACAGTAAAACTGCAGTACAGTTAGT # Right flank : CCGATTGGTGTAGTGGCTGCGGGGGTTTCTCCGTCCATGGTGACCTCCTGGGTCTGTTGTTTTTTGGATATGAGAAAACCCCGCTCCATGAACTGCTCCCCATTAGTTGGACTGAGAAATCAGTTACCTACTAGTGGGGAGCAGTTGTATGCGTGCACGTAGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCTCCGCACACGCGGAGGTATTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //