Array 1 146679-147551 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021780.1 Paenibacillus donghaensis strain KCTC 13049 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 146679 32 100.0 35 ................................ TCGTGCCGTGGCTACGTCAGTCAGTCGGAAATGTG 146746 32 100.0 34 ................................ GGAGAGTACAAAAGCAATTCGACCAAGACCGTGT 146812 32 100.0 34 ................................ AATCATTATGGCTAACGTTAAATATACAGATTTT 146878 32 100.0 34 ................................ CTCACAGGGGGGTTGATCGTTTTCAACCCGGATG 146944 32 100.0 35 ................................ GTCCTGTCAAGCAGCAGCTCCTTGATATAGTCGTC 147011 32 100.0 34 ................................ ACATAAGGGTTACCGCTGCCGTCAAACTTAAGGT 147077 32 100.0 36 ................................ ATAGTTGGGCTGGTGGGCGGCAAATGTCCCGAACTG 147145 32 100.0 35 ................................ GAAGGAGAATATGCAGTTGTTGAATTTGACGGACA 147212 32 87.5 34 ............GC.....C...........C CCGTTGTTCGGCGTGGATTACACTTGGCAGTTGT 147278 32 90.6 35 ............GC.....C............ TGCTATCGTGTCAACAATGGTCGGGATATCAAGCA 147345 32 93.8 36 ..........C..C.................. CGTTTTTGGCAATAAGAAAATAAGCCCCCCTGCCCT 147413 32 81.2 9 ...A.........C..........T...GT.G AAAATCACT Deletion [147454] 147454 32 84.4 34 T.........A.GC.....C............ CAGGCCGACAGTTTCGGACGGATGGGCCAGTTTT 147520 32 84.4 0 ..........C.G......CA..........C | ========== ====== ====== ====== ================================ ==================================== ================== 14 32 94.4 33 GTCGCTCCCCGTATGGGAGTGTGGATTGAAAT # Left flank : CGAAAGATTCTATAATAGTATGGAGTCCGTGTACTCTCAGCTCATCGGCAAGCTTATTGATTATGATGACATAGAGCTGTACCAAGTATTCCAAAAAAGACTAAAAGCTGCAGTCGACAATACTTATAATTATGGTTGGGGTTTCCACGATGGCCTAATAAGTGAATATGGAGAGATCCTGGATCATTATGGGGAAGTGGAGTGAACAAAGGTAAAGATTTAGAGATCAGTAGAAAACAGTTGAAGGTAATTGAGTTCAGATAGAAAAGTAACGTTTAGTTGGGTATAATTTGGTAACCGATATATTTCTAATGCCCTTTGCAATTTTCTGGTGCGAATGTATAGCTCACATGAAATCCCCGGGAGATTCGCACCGAATTTATTACAGTATTTGGATTCAATGAGCCTGCTGAATGAGCATGTTGATATGATTTTGGAGAATGAAGTGATATTTCAGGCCTAAAATAGGATTTAACACCATTTTTTGGCCGGGAATCGCT # Right flank : CAGACAGGGTGTAACTTTCAAGTATTGTTATATAGTATTTTAGGCGAGAGGACCAAGATAATAAAAAGCACCGAATTTCCGCTTAGTCAGCAGAAATTCAGTGCTTTTTTTCACAATCTCAGTTTATTCCTTGCGGCGTACATCGAACAAATCGTTAGGACTGACTTCAAAGTAGAGACATAACTTCATTATCAGTTCCGCTGAAATTCTCTTCTTTTCCATATTGGTGTTATGCATTAATTCCATGATCGTTGATCTTCTGTGCCCAATCTCTTTGGACAATTTTAATACAGATATACCACGCTCTTTTAATATTGTGTCCAAGTTGCAGTAAAGAGTGTAATCGTTAAATTCCATGGTGCTCCTCCGGAAATTAGAATTAGTTGCACTTTTAAAGTTCATATAGTATATTGTTGATGTAGATGTTGAACTTTAAACGTGCAATTTAGATGTGAGAATTTTGTTGGTACGCTCTTACAAATATCCTAGAGAGCAAACAA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTATGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.40,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : NA // Array 2 148955-150576 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021780.1 Paenibacillus donghaensis strain KCTC 13049 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 148955 32 100.0 36 ................................ CGTATGCTTCCAATGATTTTGATAGCCGCGAAGGCC 149023 32 100.0 33 ................................ CCCGATCGCTTCATCATCCAACATGATGCCATA 149088 32 100.0 32 ................................ TCTTCCTGGATGCCGTTGCGCGTGTACTTGGA 149152 32 100.0 35 ................................ AATAATGTAAAGCGAATTTGAACGATAAAATGTTC 149219 32 100.0 33 ................................ TTTGAGTTATGGATGAATTAAAGGCTAAACTCC 149284 32 100.0 35 ................................ CAATAAACTCCATCGTTCTTACGTTGTTTGCTCCT 149351 32 100.0 34 ................................ TATCCGAACCCGCTGCTACCCGGTGGGAACATGC 149417 32 100.0 34 ................................ GTAAAGACTGAGCACGAAAAAATCAAGCTCTTGC 149483 32 100.0 35 ................................ GGAAGTACGATGTTCGGCACACCAACAACTACGGG 149550 32 100.0 35 ................................ TTGTCTAGGTTATTGATATCGTCCAAGGCCAGCAC 149617 32 100.0 36 ................................ CTCCTTGTGAGCCGGCTCCAGATATTCCGCATCTAC 149685 32 100.0 36 ................................ GGTAATAGCATTTATGCATCAGATATTGTGCAGAAC 149753 32 100.0 33 ................................ TTAAGTGCTAAGAGTAAAGAGTCCTTTTCAAGT 149818 32 100.0 34 ................................ TGCGATATCCGCACGCAATGACTCTTCGTGGTAC 149884 32 100.0 35 ................................ ATGATGATCTTTACCATTGTGAGTGGTTTGTTGAA 149951 32 100.0 32 ................................ AACTTAATGGTGTGCCCGGCATGTGCTGGCTG 150015 32 100.0 33 ................................ ATAGGTTCCAGAATCGTTAACTTTAAAGATGGA 150080 32 100.0 37 ................................ GAGGATGGTAGGATTGCAATAAGCTTAGATAGAGATT 150149 32 93.8 33 ...........................TG... ATTACCGTTTGCATCCAATAATGGAAGATATAC 150214 32 100.0 34 ................................ ACCTGAATGACCTCATTACTAATTACAAACTCAG 150280 32 100.0 34 ................................ AAATCTGCGTGTGTCTTGCCGCCTCCCGTCCCCT 150346 32 100.0 34 ................................ CGGAATCATGGTCAGCAAGCATGATGCAAATTAA 150412 32 100.0 35 ................................ ATCCAGCATGACGCCGTATGAAATGATGTACGCCA 150479 32 100.0 34 ................................ ACCAAATGAATTAGATAAGAATTGACCAGTCTCA 150545 32 90.6 0 ...........CA............A...... | ========== ====== ====== ====== ================================ ===================================== ================== 25 32 99.4 34 GTCGCTCCCTATGCGGGAGCGTGGATTGAAAT # Left flank : TGGAACAGACGCTCGACGAAAAGTGGAACTTGCTGTTGATTCCGGATTCAAGGCTTGCAGCATGAGCAGTTCGATGCTTATCATAGACATTTTGAGCGAGTTTAGCGGTTGAATATAACTTTCGTTTTGGATGACCGTCCCTGATATTTTATCACATCCTTGATCATCGGCGATATCTGGGCAACATTGCTCCAAAAGTATCTATCAATAGAAATTTTGAGAAGGAAACTGTTGTTAGTGGAAGGGTACTATTTGCCTGATACGAAATGGAGTACAATAGATGGTGTAGCTTGTTGCAATTGAGAAAAAGAATTTTGGCTTGAACGAGCTTTAACTAAGTGGTGCGAATGTATAGCGCACATGAAATCCCCGGGTCCTTCGCACCAGATTTATTACATTATTTGTATGATTGTTGGATATGTTAGCCTATGTATTTAAGAATTAAGTGATTTTCCGACTCATTAAAAGGGTTTTTATCCTATTTTTAGTCGAAAATCGCA # Right flank : TACCTGCTATGTCTCGCATCCGCTGTTCACGGAACAGTCAGCAGCCACGCTAGATTCCACTCTCTCACGCAGAATCGCCGAACGCAAAAAAGCACAGTGCACCCAAGGGGCAACTGTGCTTTTTTCAACCTCCACCTAATCCCCTAATACTAATCCACAATACAAACAGAATATTCCCCGCGCCCGTCGGCTGGCTGGATGACACCTAGCTCTTTGAGCTTGGCAATGTTTTTGGCTATGCTGGAGGGCGAGGCATCGAGGGTGTTGTCGAACAGCTCTCTGTGAAAAATCTCCCCATCCTTCATCGTGCTGATCAGCTCGAACATCGTTCTGGCATGGCCTTTGCCCAACAGCTCGCGAATATGTTTGATCCTGTCGTACCGCTGCAACTCCTTCAGAACTTTAGTGAGCGACGCATTCACACACTCCAGGTAGAACACGATAAAGGGCTTCAAATCTCCTTGCGTCGCCGCCATCAGCGTATCGTAATAATCCTCAAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTATGCGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 153758-154456 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021780.1 Paenibacillus donghaensis strain KCTC 13049 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 153758 32 100.0 34 ................................ TTCTTCTTCCCAAGCTCTGCGCGCAGCTTGAACC 153824 32 100.0 34 ................................ TGCAGTAGCGGCAGAGCAGTCCGAAATCGTGGCC 153890 32 100.0 35 ................................ CGTATCTAATCCGTTAATCAATCCAAGAGCTCGTA 153957 32 100.0 34 ................................ CGGCCTTTTTAATTCCAATCTCGTTTACGTTCAT 154023 32 100.0 35 ................................ ACGCCCTGCCGCCGGTGGTCACAACGTCCGTGAAC 154090 32 100.0 35 ................................ TGCCACAGTGTCCCGGGGGGATCACATTCACGCCC 154157 32 100.0 35 ................................ AGCATTAACCCGTCCACATTCGCGGATATGATCGG 154224 32 96.9 36 .............A.................. TGTGCGGCCGGTGGTACGGCCTTGGACGGTGTAGCC 154292 32 100.0 35 ................................ AGCTCTGTCGGATGCAGATGGTTGTGTGCTTTGGT 154359 32 100.0 34 ................................ CAGTAATCCGCTGGTGGACAAGGGCCGTTTGGTC 154425 32 96.9 0 .............A.................. | ========== ====== ====== ====== ================================ ==================================== ================== 11 32 99.4 35 GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Left flank : CTATTATAGTGGGTGAATCAATGTTAAAGGAGTTTCAAGTCGAAATCGGAAACATGGATTATGGCATGGATATCGATGCTATTCTTGGCTTTAACTTCTTGAAACAAGCAAAGACTGTGATTGACGTCAAAGCAATGGAATTGAAAACGGGAGCTTGCTAAAGGACTGTTTCTTACAATTGCAGCGGGGTTGAGCTCGAACCTTTCTCTAGCAGCCAGTTTGTTTTTTTGTGCTTGATATAGAAGAATATGAATATGTTGCGGAGAATGCATAAATAGAAGAGGAACCAACGGCGCGAATGTGGTCACACAATCAAGTAGATGGGCTAAAAAGTGCGAACCTCAAGCGCACATGAAATCCCCGGGAGGTTCGCACCCTATATGTTACAAGGGTTCATGGCATATTGCGCGTTAAAGTAAAGACAAGTTACAATGAGATTCGTGAGGTTCGCACTTTTGGCTCTTCCAGCCCTTGTCCTGTAAGGGTTGTTTTGGGTACCT # Right flank : CACTACAGTTGTGGAAAGAAAATAAAGTAATGGACTGGAAAATAAAGTGTTAGACTCGGAAAATAAAGTTGTAGACTGAGAAAATAAAGTATTAGACTGTTGCTCCTCATTAAGCTAACGGGCAGGATAGTTTAATAACATATCGAATGTTGAAGCTTGGAAAGGAATACGACGTGAGGTATTTGCTAAACTGAGTGAGGTAGAAGTACTTAAAAAGGAGGTACCAGATGGAAACTAATCAAACTATTCGACTGGCAATCGAAGAATCTATACAGTTTCTTGAATTTGCACCGCATTTTACGATGGCTCACGGCGAGTGCACTCGTCGAAAATGGGATGGAGTTTGGTGGCATATGGCTGCTCTTTATGAAATGGGAGAGGTGAAACGGATCCCCCAGTCCGCTATTGAAAGAGCTAAACATCTACTCAAAACCCAGGTCTGGCCAACTTTTATTATATCCGCCAATGACCATCCAACAAGTGAAAGTGATAAGATGAAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC # Alternate repeat : GTCGCTCCCCGTGAGGGAGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 3722297-3722690 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021780.1 Paenibacillus donghaensis strain KCTC 13049 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================ ================== 3722297 31 100.0 44 ............................... TGCCACAACTTTTGCTCCCGCCTCTGCGTTTCTACCTGCCAAAC 3722372 31 100.0 44 ............................... TACTGCTGCTCTTGCCCCTGCCTCAGCGTTTCCACCTGCCAAGG 3722447 31 100.0 44 ............................... TACTGCAGCTCTTGCCCCTGCCTCAGCGTTTCCACGTGCCAAGG 3722522 31 87.1 44 ..........C...........TT.G..... TTCTTCAGCACTTCCTCCTGCCTGAGCATTGCCACCTGCTGGCG 3722597 31 87.1 32 .T.....................T.C....T GGCTAACGCAGCACTTGCATTTGCTCCTGCCC Deletion [3722660] 3722660 31 80.6 0 ...T...T.CC............T...T... | ========== ====== ====== ====== =============================== ============================================ ================== 6 31 92.5 42 CAGCTCTCGATCCGGCTTCAGCAGCTCCGCC # Left flank : CAGCGGCAGGAACAGGGTCACCTGGGCAAACGGTGCCGTCCGGTCTGTATTCAGCAGCAGCTGCTGGCCTGTCAGCTGCTGCACCAGCTGGCCCGCGGCTTCCTTCACCGCGGGCGGCACCTCGCTGCTGCCTATCACCTGCAGCAGCACGCCCTTCAGCGTGCCCTCCGCCTCCCCGGCGGCAGGCACGCCCTGCGCCGCGGCGTTGCCTGCGCCGCGCACCGCCAGCTGCTCGTGCTCCGCACCGAGCAGCTTCAGCACGCGCCCCACCCACGTCTCTGCCGTGGGTGATGGCGCGCCTGCCGGCTGCTGCACCGCAGCAGCCGGGGCGGGTTCCTGCGGCGAGCTAGCCGCAGGGGTGGGGGCTAGCTGCGGCAGCGTAGCGCGCAGCTCGTGCAGTACGCCCTGCAGCTTCGCCAGCAGGGCAGCTCCGCCAGGTGCGGCGGCAGCTCTGCCGGCCGCTGTACTTGCAGCAACTTCAGCGTTTCCACCCGCTAAAC # Right flank : CAGCTAACGTAGCTTCGCCTGGCACACCAGTTGCCTTTGCTCCCACAGTGTCATCAGCTGTCTGAGCTCCCAAGCTTCCCGCTCTTACACCCTCAGGATTAGCTGCTTCTCCGGCTCTTGCAGCAGCAAGGCCTTTCGCTGCAGCCGCATCTTCGCCTGCGTCGGCAGACGAAGGTGTGGCTGCCGTTGCTTGTCCGCTGCGTACTGCCGCAGTATCGCCTTCCTCACCGGACACATTACCCGTTGAGATCGCACCTGCCACACCTTCTGCAACGGCTGTCGATGCTGCAGGTTTGCCTCCAGCACCACTATTGGCAGCAGGTCCAGGGGACTCCTCCATCTGTGCTGTCCACAGTGTCAGCTGCTCCTCCAGCGTACTCAGCAGCTGATGCAGCTGTGGGCCAAACACCGCCTGCTGCAGCCCCTTCACACTTTCCGCAGTTACAGGCAGACCTCTCTTCACGGAGATAACGGCTGCTTCCAGCCATTGCGCTGCCGGA # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCTCTCGATCCGGCTTCAGCAGCTCCGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.10,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 5 6544922-6544036 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021780.1 Paenibacillus donghaensis strain KCTC 13049 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6544921 32 90.6 32 ........................C...G..C TGAGTTAAGCTAAAGAGTACGACAGGAGGAAA A,GG [6544892,6544894] 6544854 32 84.4 24 ........................G.ATGG.. GGACATGGAGACGGATTACCTTGG GC [6544829] Deletion [6544799] 6544796 32 100.0 34 ................................ TAATCGAGCGTGCCAGAATGAAGAAATATAGTGA 6544730 32 100.0 34 ................................ TCCACGTCCGGTACTATAAATCAATGGATTTCTC 6544664 32 100.0 35 ................................ AATACCTGGGCGCTAGAGCAGGCGACCCATGTAAC 6544597 32 100.0 34 ................................ AGGATGCCAGGGCGGGCGTACCGTACAATACAAT 6544531 32 100.0 35 ................................ CGGTATCTGTGTTTATTAACGGGACCCCAGCCAGC 6544464 32 100.0 35 ................................ AAAGTTATTACTGCGAATAACGAAAGTACAACTTT 6544397 32 100.0 34 ................................ TGCCAGTATCGAAATCGGCCGGCGCTTGGTTGAA 6544331 32 100.0 33 ................................ AAACGGATTACAAGGGCGAGATTAAGCTTGCTC 6544266 32 100.0 34 ................................ TGAAAGAATACAGAGGCTGATGGATGAGAGTAAT 6544200 32 100.0 32 ................................ CTGATGGAAAAAAATGGGCAGGCCCTTCGGTA 6544136 32 96.9 36 ..........A..................... TTGGAAAGAGACTCAAGAGCTGGGAACTGTTCGACT 6544068 32 96.9 0 ..................T............. | T [6544041] ========== ====== ====== ====== ================================ ==================================== ================== 14 32 97.8 33 GTCACTCCCCGTGCGGGAGTGTGGATTGAAAT # Left flank : GAGGAGGAAGTATACAAAGAACCTGAAGCAGAGCTTGAGATTTTTGGCTGCAATTGACCCTATACACCAACATCTGGTGAAAGTATGGACAAACATCTTATACCCGGAGATAGCTTTCCTATAGAAAGCTATCAGGCCATCGTCATCGCGCCTACAGTTCCCTAATTCCCCTCCATTTATCCTCTACCTCAACCTTTGCTAAATTATTTTTTTCCCAGAAAGTAGTCCTTAATAAATTTTCAACAAATCCAGAAATGAAGTAAGGGGAAATAAAAGATATATGGTAAAATAAAAATGACTTAGTAGATTATGAATCGAGTTGAATGTTGAAGTGCGAATGTATAGCTCACATGATTTCCCCGGGTCCTTCGCACCATGTTTTTAACATTATTTGTATGTATTAATTAAGTTTATAGCGTTTTTAGTTTTTGATTAGAGAATAAAGGCATATTTTTAATATGGAAATAGGGTTTAATCCCTTTTTTTAGTTGAAAATCGCT # Right flank : CCATGTTGGTCGCGTTCTATAGGTAAGCGTCAAACCAGGCCACCTGTTCAACAGATGAGGGTCGCGACAGACTGAATTAAGGTCTAGCTACCCGACAAATGAGCGGGAGTGCAGGTGACCATGGCATTAGCTTGTCCAAGGCTTCCGTATCGTTCGGATCGGGGAGTTGCGGAAGCTGTTCGAACAGAAATTTCAAGTACTGGAACGGATTCAGTCCGTTCTCTTTCGCCGTCTCTATCACGCTGTAAATCACGGCGCTGGCCTGGGCCACGGGACGTATTCGCAAACAGCCAGTTCTTTCGCCCAATGACAAACGGTTTAATCGAACGCTCGCTGCGGTTGTTGTTGATCTCCAGCCGTCCATCCTTTAAAAAGTCCGTCAACTTTTCGCACTGATTCAGGCTGTAGGTGATCGCCTCCCCCAGAGCGCTCTTGGGGAGGACGCCGGACTTTTGCTGATGCAGTCACACGGAAAAAGCCGCCCGAATGGGGCCGCTGCG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGTGCGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.5 Confidence: MEDIUM] # Array family : NA //