Array 1 128519-125391 **** Predicted by CRISPRDetect 2.4 *** >NZ_FODX01000003.1 Nitrosovibrio sp. Nv6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 128518 37 100.0 35 ..................................... CTCAAAGCACAAGCTGTTCTCCCGCCCAGCCTGGC 128446 37 100.0 35 ..................................... CAAATCGGGCGGCATTTTCCAATCCGTTATCCAGC 128374 37 100.0 36 ..................................... CCGTATAGTCTAGTAGCCCACCGCCGAAGCTATTGG 128301 37 100.0 35 ..................................... GCCAATGCAGCCAGGGAGTTTCAGGGGGTGATCAG 128229 37 100.0 35 ..................................... TTACAAATACAGCGACAAGGGCAAGGAGTCAGATT 128157 37 100.0 35 ..................................... GCTTCGAGGATGAGGTTGAGTGGCTACGGAAGAAA 128085 37 100.0 36 ..................................... AATAAATCTGGCGGGAAAGTATACCGGGGACTGGTC 128012 37 100.0 34 ..................................... AGTTCGGCCTGGAAGTCGTAGCCAATCAGCTCGT 127941 37 100.0 35 ..................................... GTCTGGCTGCTCGAAAAAGGCTCGGCAGCCTGGAT 127869 37 100.0 36 ..................................... GGGGATGTGACTGACGTGGTCAAGGTCAAACCCGGC 127796 37 100.0 37 ..................................... GCCCTACTCGGCTGGATGGATAACAGAGATCGGGCAT 127722 37 100.0 34 ..................................... ATCCATCAGTCCGGCTGTGGCTGGCACGGTTACA 127651 37 100.0 35 ..................................... GATGTGGTATGTGGCGTTGTGTTGGAAATGATTAC 127579 37 100.0 34 ..................................... CTGCGGATATACCCATGCGCGGGTTACGCCAGCG 127508 37 100.0 34 ..................................... CGGCATAAGCGACTGGTACGACTATTTCTTTGAG 127437 37 100.0 34 ..................................... TCGCAGCGGCAACACCATCACCGTAACCGGAAGC 127366 37 100.0 35 ..................................... TTGCCGCGTAGCAAAACTTCAACACCCGGCACGCC 127294 37 100.0 35 ..................................... AGTATTGGGCAGGAAAGCACTCAAGGCTCGCGGAA 127222 37 100.0 34 ..................................... TGTTGCGGTGCACGGGCATGTTGAGTATGACGAT 127151 37 100.0 36 ..................................... GCAACAGCATGGGCAAAGGTAGCAAACCTTTCCGGC 127078 37 100.0 35 ..................................... ATCAACGGTGAAGGCAGCTGGGACGCCAACCCGTG 127006 37 100.0 35 ..................................... CCCCAATGCGCCACATGTCGGAGATGTCATCAGAT 126934 37 100.0 35 ..................................... AGACTTATTGTCGAGTGCGATTTCGAGGAAGCGCA 126862 37 100.0 35 ..................................... ACAGACACGTTCGGAGTGCGTCCTGTGTCCGGCAC 126790 37 100.0 35 ..................................... TTCGCCGGATCGCCCTTGCCCAAGGGGATGATGGG 126718 37 100.0 36 ..................................... TCTTATCAGCCAATTGGCCTATACGGAAGCCCGCGC 126645 37 100.0 37 ..................................... AAGATTAAACGCGTCACCCCGACGGGTCAAATCGTAG 126571 37 100.0 34 ..................................... ATACAATTTTTAGCCGGTTCCATATCCGCGTTAT 126500 37 100.0 34 ..................................... AAACGGGACTTGCCGCCGTATCGACTGGCGCAAC 126429 37 100.0 34 ..................................... ACAAGTCCGTAGCAGTTGTTCTCCCGGTCCCGGC 126358 37 100.0 35 ..................................... AGCGATAACCGCTATGTGCTCGCGCGATTCGCGTT 126286 37 100.0 34 ..................................... TAGTTGAGCTTGTTTGTGTTCGAGCAGGAACGGA 126215 37 100.0 36 ..................................... AATAAACGTGCTCACGGCCTCGATAAACTCCATGCG 126142 37 100.0 35 ..................................... CGCAAAAGAGCAACATTCCCCGTGGTCGTAGATGC 126070 37 100.0 35 ..................................... ATAAAAACGTAAAAAATCACTACGCTCTCCTTGCG 125998 37 100.0 34 ..................................... TCAACACCATATTTACGTATGGCGGCATGAACCG 125927 37 91.9 34 .GTA................................. CGCGCAAGGGAGTTGCCTACCTTGATATCTCATA 125856 37 100.0 35 ..................................... ACGGTGGCCAAGGCCATGCAGCTCGATATCCTTCG 125784 37 100.0 34 ..................................... AGTTGCGCGCTGGAGGAAATAAGTCCGCGATTAG 125713 37 100.0 34 ..................................... TGTATCGCTGCCCATGGTACGTCCAAGTAAAAGG 125642 37 100.0 35 ..................................... GGAAAGTTGGCCGGGATTTGCGCGGAATATCTCCA 125570 37 100.0 35 ..................................... CCGCTATTGTAGGGATGGGTAACCTGTTCGGCTCG 125498 37 100.0 34 ..................................... CCCACAACAAAAGGTAACACGCTGCATGAGGCTG 125427 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ===================================== ================== 44 37 99.8 35 GTAGCGCCCGGCCAAACCGCCGGGCGAGGATTGAAAC # Left flank : CGGATACCTACCCTTTCTCGCGAGGTAGCCATGCTCATTATCGTAACTTACGATGTTTCAACCGAAACAAGGGAAGGGCGAAAGAGGCTCCGTCGGGTGGCGAAGGTATGCGAAGGAACAGGACAGCGTGTGCAGAAATCGGTATTCGAATGCCGGGTTAACTTGATGCAGTACGAAGAATTGGAACGCAGGTTATTAGCAGAGATTGATCAGAAAGAGGACAATCTCCGTATCTACCGCTTAACCGAGCCAGTGGAGCTGCATGTGAAGGAGCATGGAAACTTCAGAGCGGTAGATTTTGAAGGACCTCTGGTCATTTGATGCGCGAACCTCAAGCGATGGCAATACACCAGGGGTATTCGCGCTTTATCCAAGTGCTTGGCAATTATGAACAATTCTCTTCACATTCTATGTTTCACCTCGATTGTTCCGGCTGGGGATAAAGGGTTCGCGCATTCGCAACAGAATTTTCTGTTGCATGAAGGTGTTGTAATTGTACT # Right flank : TTGTTAGTAGGTGTTGATGAGCGGATAAAAAACTGTAGCCAGGCGATGATTAACTGTACGACCACCAGCCGTAACTCGGCGTATCCAAATTTTACACGAGCACAGACGCGTCCGCTTTTTCTCTCCGCCTGACCCATAGCCCAACCAGAAGCATTCCCGCCAGCATCATGGCGTAGCTCTCCGGTTCCGGTATGGCGGCGATCATCCCCACTTGGCCGTTGATACTTACCAGGTACAGGTTACCGGCAGCATCTTCGCCGAACGAGGTAATCCCACCGGAAATGCCGGTTGGGGACAGCAGTTCCGCAGTGCGGTCGGCGAGTGTCGTGTTGGGGTCTGCGGGATCGAAGGACATCACCTTGTCGTTCACGAAGTCGGCGAAGAAATAAGTACCTTCCAGCCCTTCGATCTCTGATCCACGATAGACATAGCCGCCGATGACCGAGCCGCCTTCGTCAGTATGGCTATATTCATGAATGGGTGGTGTGTGATTTGGAATC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCGGCCAAACCGCCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATCGCCCGGCCCAACGGCCGGGCGCGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-17.20,-16.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //