Array 1 69059-66526 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASIN010000007.1 Parabacteroides merdae strain K34_1 scaf_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 69058 32 100.0 34 ................................ TATATCAAGGTAATTGGGACATTTGCATTAGGCG 68992 32 100.0 34 ................................ TTAAATGTTAAAATGACAGGAGTTTTAGAACACT 68926 32 100.0 32 ................................ TAATGGATAATGAGTACGCCTAACGGCGATTA 68862 32 100.0 34 ................................ CATCGTGCTATGAACTCACCGTCAATATCGAAGG 68796 32 100.0 35 ................................ CTACGAGGAAACATGGTGTATCTGGTGTTAAAAAG 68729 32 100.0 34 ................................ CATCGGGCAGCTTACATTAGCAGACGGAGCCGGC 68663 32 100.0 35 ................................ GTTATGATGCTCTTAATATGCCCGAGTACCTCGGT 68596 32 100.0 34 ................................ CTTGTGGCTCTTGTGTTATCTGCCGTAAGCGTAA 68530 32 100.0 33 ................................ ATCTTAGAAAGCGGAGGATAGGAAGCGACTTTT 68465 32 100.0 35 ................................ CCTGGCGTCCACGAACAAAATATAAAAGTTATGGT 68398 32 100.0 32 ................................ TTTTGACACAAGCTCCTTCTGTTATTGATTAT 68334 32 100.0 34 ................................ TCCATTTGGACAATTTGTTCCGGTGTAGGATTTA 68268 32 100.0 33 ................................ ATCTTAGTTTGGATCGGAAACATCATAGGCATG 68203 32 100.0 34 ................................ TTTTTGAGCAGCAATAGCACGTTTCTGACGCTTA 68137 32 100.0 34 ................................ ATCTTAGTTTGGATCGGAAACATCATCGGCATGA 68071 32 100.0 34 ................................ ATTTTGATTGTACCGCGCAGTTACCTATTTCTCG 68005 32 100.0 33 ................................ ATTTTGATTGTACTGCTCAATTACCTATTTCTC 67940 32 100.0 33 ................................ CCTGTTACGCATTTTAAGGATATACTTAAGGTC 67875 32 100.0 34 ................................ AAATATAGAACATCAAGATATCCAATACGCTAAG 67809 32 100.0 34 ................................ ATGGTCAAGCCTCCTCAATTGTTTTATTGTTGAT 67743 32 100.0 33 ................................ ACGGTACGTTAACCACTTAGGCAGAACACTGTC 67678 32 100.0 33 ................................ AAGAGAAGGATTGCCTAAAATCTCATCTCTACG 67613 32 100.0 34 ................................ ACGACTGATTTAGGCCGCATTACTCCGGTATTTA 67547 32 100.0 33 ................................ ATTAAAATACTCACGAGATTTTATCCAATTACC 67482 32 100.0 34 ................................ AATACTATACGGATGAGTTTTGTGACCCCTTTAA 67416 32 100.0 33 ................................ ACGGATGTAGATACGATCAAAATCCAAGGCCTT 67351 32 100.0 35 ................................ TGATAAAACAGGAATAAAACACAAAAAACCGTTCC 67284 32 100.0 34 ................................ AGGATTGTATGTAAGTGTAATAAAAAGAGGTGCG 67218 32 100.0 35 ................................ TTGACAGTGATAACAGTAGCGTAATAAGTTTGCAA 67151 32 100.0 35 ................................ TGTAAAGGATAGACAGGATAATGCAGGGAAAGAAA 67084 32 100.0 33 ................................ CATAGCGGTAGGAGTAGCCATAATAGGGCCTGC 67019 32 100.0 33 ................................ CTGTTTGTCTCTTACTCCTTATTCCCAATTCAT 66954 32 100.0 35 ................................ ACGAATATAAATACGATCAAAGCCCAAGGCCTTTT 66887 32 100.0 34 ................................ ATGGAAAAGAGTAGGGAGGTCGAAAGCGTGATAT 66821 32 100.0 34 ................................ AGGAACGGGTAAACATACTTGAATATGCCGCTTT 66755 32 100.0 34 ................................ CGTTATATGTTTTATAACATATAGTCGGTTGTTG 66689 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 66623 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 66557 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ =================================== ================== 39 32 99.6 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : GAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 75963-74739 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASIN010000007.1 Parabacteroides merdae strain K34_1 scaf_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 75962 32 100.0 33 ................................ ATAAGCGCGAAAAGGATAAGCCGATACCTTAAT 75897 32 100.0 34 ................................ TATAAAATCCTCCCACCCCTATATAAGGTGATAA 75831 32 100.0 33 ................................ ATCCCATGACTGACCTTTCTTCGGTATGCCGGC 75766 32 100.0 33 ................................ GGAGATTTATAAGTTGCTTGTAATGGAGGGTGG 75701 32 100.0 34 ................................ ACTACTAATGAAGTCCATATAATCCTTCCATAAA 75635 32 100.0 34 ................................ ACCGTGATGCTGCTGTCTTTAAGCTCCAACAGGA 75569 32 100.0 35 ................................ CATGATCTGCCCTTGCCATGCCATACAATATTTAG 75502 32 100.0 35 ................................ TCACAGACACCGTAATCGTCTACACCATCAAAGAC 75435 32 100.0 34 ................................ GCTACTGATGAAATCCATGTAGTCCTTCCAAAGA 75369 32 100.0 35 ................................ TTATCAATCCCGAGGCCCGTAAAAAAGCCTTGGAT 75302 32 100.0 34 ................................ ACTACAGATTTAGGTCGTATTACTCCCGTTTTTA 75236 32 100.0 35 ................................ AAAAGAGATGCGCCACCAGTACCAGAGCCCAAAAG 75169 32 100.0 33 ................................ ATGAAGTTGCAAATGTTACCTTAGCATTATAGA 75104 32 100.0 35 ................................ CCCGACCAAGCATGGACAGTCACCGGCAAAACCAA 75037 32 100.0 32 ................................ TTGTGCAGCAATGGCGCGCTTTTGGCGTCTAC 74973 32 100.0 35 ................................ GAAATCAACCTTATAAGCATTACCGTCCTCGTCAA 74906 32 100.0 33 ................................ TTACCAGAGTGCAGGAGTTTTTTCGCAATGCCA 74841 32 100.0 39 ................................ GTCCGTTTTAGAATACAACAGTAATAATGCAACTAATAA 74770 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 19 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //